Basic Information

Insect: Chironomus tentans
Gene Symbol: -
Assembly: GCA_963573255.1
Location: OY754304.1:35022204-35027143[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0018 0.096 13.4 0.7 1 23 1049 1072 1049 1072 0.95

2 13 0.0053 0.28 11.9 1.3 1 23 1184 1206 1184 1206 0.97

3 13 0.0076 0.4 11.4 3.7 2 23 1209 1230 1209 1230 0.97

4 13 0.016 0.85 10.4 1.6 1 23 1236 1258 1236 1258 0.96

5 13 5.6e-05 0.0029 18.1 1.4 2 23 1265 1287 1264 1287 0.95

6 13 0.011 0.57 11.0 0.1 5 23 1300 1318 1298 1318 0.97

7 13 4e-05 0.0021 18.6 2.6 2 23 1324 1346 1323 1346 0.95

8 13 0.18 9.4 7.1 0.3 3 23 1360 1379 1358 1379 0.96

9 13 0.00039 0.021 15.5 3.4 1 20 1386 1405 1386 1408 0.92

10 13 0.00049 0.026 15.2 0.2 1 23 1416 1438 1416 1438 0.98

11 13 1.2e-05 0.00064 20.2 2.3 1 23 1444 1466 1444 1466 0.97

12 13 6.8e-05 0.0036 17.9 3.9 1 23 1472 1494 1472 1494 0.98

13 13 0.0035 0.18 12.5 4.6 1 23 1500 1522 1500 1523 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0018	0.096	13.4	0.7	1	23	1049	1072	1049	1072	0.95
2	13	0.0053	0.28	11.9	1.3	1	23	1184	1206	1184	1206	0.97
3	13	0.0076	0.4	11.4	3.7	2	23	1209	1230	1209	1230	0.97
4	13	0.016	0.85	10.4	1.6	1	23	1236	1258	1236	1258	0.96
5	13	5.6e-05	0.0029	18.1	1.4	2	23	1265	1287	1264	1287	0.95
6	13	0.011	0.57	11.0	0.1	5	23	1300	1318	1298	1318	0.97
7	13	4e-05	0.0021	18.6	2.6	2	23	1324	1346	1323	1346	0.95
8	13	0.18	9.4	7.1	0.3	3	23	1360	1379	1358	1379	0.96
9	13	0.00039	0.021	15.5	3.4	1	20	1386	1405	1386	1408	0.92
10	13	0.00049	0.026	15.2	0.2	1	23	1416	1438	1416	1438	0.98
11	13	1.2e-05	0.00064	20.2	2.3	1	23	1444	1466	1444	1466	0.97
12	13	6.8e-05	0.0036	17.9	3.9	1	23	1472	1494	1472	1494	0.98
13	13	0.0035	0.18	12.5	4.6	1	23	1500	1522	1500	1523	0.96

Sequence Information

Coding Sequence: atggagCAACAACAATGTCCGATTTGTATGCTTTATTTATTGCCTGGAATGTGTCTCCAAGATCATTTAGACACCCATCCCAAGGATATGATTATCAAGGCTCTACTCTCAGTTAAAACAGAACCGCCTAAGCAGCAATCGCCTGTGAATAATTCAAATGAGATGGCTGCGACGACACTTTTTCTCACAACACCATTTAATTCATCACAAACCCACAtatatcaacaacaacaacaacagcagcagcagcagcaacaacagcaacaacaaaatcagACACCTATTCAAAATAGTAGTTTTGCTGTGGCGAAAAGAAATTCTGGCAATAATGCAGTTCTTCTTGGTAATCGTCCATATCGATTAACACTCGATACGCAGCAAGCAGCAGCCAACATTTCTTCGCCATCAACCACGACCTTCCTCAATGCAACAGCTGTAGCACCCAATCATAGTTACGGAAGACGAGtgacaaatgaaaatgatttatttgctagtgataataataaaacggCTTTTCGGTGTATCCAACAGAATACTGagcagaaaaatattatgattgTGAATACGAGTAGTacacaattttccattcaacaaACAGTTCCTGTCAAgaaacaacagcagcagcagcaggcACAAACAGCAACTGCCATAGAACTTCATCCCGTCATCATCGACAATTCCACGATATCAAATTCAGTTCCAAATGCAATATCAATAATTCCACGCTACACGAGCGAGAAATATTCTGGACCACCACCTTCATACGAATCTTCAGTCACCAATACAATAAATGATAAGCCACGAGTCATTGATCTCACACAAACACCCACAAGTACGGCAATGAAAATGATGGAGAAGCAATGTATTGTCGGCAATGgtaacagcaacaacaacaataacaacaaattgACGACCTTGAGCAGCAACGGCGCAGATGAGAATCATCACTTAATGATAACGTCGGcaccacaaaaatttcttgaatacACTCAAACGGAAAATGGCGATTTTATGATAACCGAGAAGCTCTTATCGacccatcatcatcatcaccaccaacaacatcatcatagtaataataataataaccaTCCCAACGTGTCACATGAAGAGGAAATCGTAGAAGAAATTCATGATTCAGACGACAATAGCTATAATGTAAAGTTCGTCGAGATTAATGAACCGctaacatttaatttatcaacGAGTGATAACGGTAGTGGGAAATATCATCAGGAAGAACATTATACAGTAATTGAAGAATCGGAAGTGGAGCAAATTAATAGTTTCAATGAATCTCAAGGATCAAgttcaaatattgaaagtCATGCACCTAAAAAATCTGGTGTCAAAGTCATTAGCAATGTTAAGTTGACATCAGCTCAAATACTTTCACCGACTATGCAAGATATCATTAatcaatataataataataataatgcaagCAGTActagtaaaaataataataataataatagtaataataataaaacacaGACTGAAAAAGAAATGCAAATTGAACAACCGGTTGTGGACATTGTTCATACTGAAATCACTGACacagaagatgatgatgacgacgacgacgacgatgatgatgttgaaatGAAGGAAGATATAAATAAGAATGATACAAAGGCTTTAATTCAATGCACAGAGACGTTGAATCTAAGCAGCAATGATAAGGAAGAGGCTTCAAGTTCTAGTTCTAGTGCATGCACGACAAGTGTAATAAggaaaacaacaacaacgagCATAGACGCTATTCCATCAACATCAAAAGCCGTAGATGAAATTAAAGAGCAAAAGCTCAAGCCTGAACCCGAGCCCAGCACATCGGCTGAGAGCTTAAGGAAAACTTCTTCTTCAAATGTTGTGTTCAATTCTACAAATAGACTgaagcaaaaagaaatttataagcAACCAAAAAAGTTAGTGGTAAAGTTAAAGAAACCTCTTCAGGAAGCTGGTGGCGAGTGTACGTCATCGACATCGATTCAaactgttgctgctgctgctacCGCTGATAACAAAGACATTACacaaataaagaatgaaaatgtggAACGTGAAACAATTACAACAACTCAGCTACACGATCATGATGACGAAAATGTCGATACACAAAAACATAGTGCAATGACCGAACGTGACTCAACAGTGTATAAGGTCGAGAGCAATGAACAATTCACAGTAACATTTCTCGATCAGCACGATTATGAGccaataaagaaaattacagTAACACCTGAAATTCATCATGACTCGGAGACAAACCAATCGGTCATGAGCATGGAACTTGAGCCTGAAACGAGTGTCGTTGCTGTGAAAAGAGAACAAACTGATAACGAATTGCCGATTATTGTAAAGACCGAAATGAGTTCATGCAGTGCATCCTCAATGGCATCAAATAGTCAGAGCAGTTCGTGCTCACGAAGTCCCTCAAgaataaatatagaaaaagtCTCTTCAATTAACATTAATGAGAGTTCACCAATCaactttttatatcaaaatgaTCGTGTCCGTTTTTCACCTCCGCTATCTCCATACGTCTACATGAAAACATTTTCGACAGGCGAAGATCAACCGAAGCAAGAGACAGATGCGTCATGGAATAATAGTAGCAGTGTCGTAACACAAAATTCCGATCAGAATTCAACATGTTCACGCTATACGCCATCGTTTGATGATAATAGAAGTAATTATACGGACATAGATGTGAATGTGAAGACGTCAAGAAATGATGTTCATATTCGTGCGCCGTCAACAGATAGCTTAAATATTCGTACTGACGAGAAAATGCCAGCTCGCGGTGAAATTAGTGAACAGGAGAGTAATGGTGAAATTGAACAGCCTTGGCATCATCCATATTTTCAACTACAAGCATACCCAAGTTCATATGACATGAATACAGCGCAAGAATGTTGGAACCTTTCAAAAGCCGATAGCCAAAATGCATGCGATTCCAATAACATACAAAATGTGATAATCAATTTCCCACCATTGAATGGTCAAGAGGACATCAAAGCACCagatttattgaaaacaaTTATGCAGACAGTAACAAAACAAGAACCATCAGGTATTAATGATGAAGCAAGTGGTAGTAATAGCAATTTAATTGTGAAAAAGAATCGTTCATTCCGTTGTCCTGAATGTTCAAAAGTCTTTATGAAATTGAGAGCAAGAAATCGTCACATGGAGCAAGAACATCCAAACTTTAGACGAGTGAAAAAGATTAAGCCAGCACCAACTGCAACACAAACGAGTAAATCAGAAGCAACAGTTTTTCCAACATCCTCGTCTTCAGCACTTGTCGATTGGAATGCAACATCGACAACACAGGAACAAGAGGTGAAAGTATTGAGTATCATTAAGCATGAGCCATCAACGTCAGCCGCTGTCCtcgtgaaaaatgaaatgaatagaATGCTTATTAGTACAACAGGCTCAATAAAGATGGAAATGGATCGCTTATTATTGGAACCATCGACATCCTCAACAACGCAACAAATGTCAACattaggattaaaaattaagagaacCTACATGTGCGCAAAGTGCAATGAACAATTCCGTACACTCAAGCTCCTTGATAAGCACTTCCAAATTCATCCTGCTGAATGTACACTGTGTCAAAAGACCTTTAATAGTTGGAATacattttcattacatttgaAGCATCATCTAAACATTCGAGTTCATGCATGCCGATTTTGTCCTAAACGTTTTGTTCAGCGTCAACGGCTTGTTGAGCATGAGAGAATTCATACTGGCAGTTTACCCATCAAATGTCCTGATTGTGATGAACGATTTCGACGATACTCAAACATGCTTCATCATAGGGCACGAGTACATTTGAATAAGAAGGCTAAACAAGAGGATTATGTATGCGATTGTGGTGAGATTTTCCAAACAAAGGCTAAATTAGAATGGCATCAAGAGACTCATGAGAATAAGCCAAAACCATGTCCGTACTGTCGTGAACGTTTTACACATCGTAATAGTTTAACCCGTCATATTCGATTATCGCACACTGAGAAGTATGTCTTTGTCAAAAGTAAAGCAGTTAATTGTCCGATTTGTAGCTGCACATACTTGCCGTCTAGTATAAAGGCTCATATGGCTACACATCAACTatcaaataaagaattttcatgttCGATTTGCAGTAAACaatttagcacaaaatggAATCTAAAGCAGCATCATTGGACGCATGCAAACCGTAGCTCAAAACCATTCCAATGCAATGTATGTCCCAGTGCGTTTGTGCGTGAGACCGACTACACAACACATATGAATGCTCACCGATCAATTAAACCATTTACTTGCAATACTTGCGGTAAAAGATTCGTTCGTAAATACAATTGGTTGCGTCACTCACGTGAACACGAGCGAGAGAAGAAATTTACATGCGATATATGCAATAAGAAGTTTCATCGGGCTTATTATCTCACCGAACATAAACGTGTCCATACAGGCGAGCGTCCCTTCTCCTGTACAATTTGTGGAAAGACATCAGCAACAAAGACGAATCATAATAAGCACATCAAGATTCATCATGCTCGTGATCCATTGACGGCTGAAGGATAA
Protein Sequence: MEQQQCPICMLYLLPGMCLQDHLDTHPKDMIIKALLSVKTEPPKQQSPVNNSNEMAATTLFLTTPFNSSQTHIYQQQQQQQQQQQQQQQQNQTPIQNSSFAVAKRNSGNNAVLLGNRPYRLTLDTQQAAANISSPSTTTFLNATAVAPNHSYGRRVTNENDLFASDNNKTAFRCIQQNTEQKNIMIVNTSSTQFSIQQTVPVKKQQQQQQAQTATAIELHPVIIDNSTISNSVPNAISIIPRYTSEKYSGPPPSYESSVTNTINDKPRVIDLTQTPTSTAMKMMEKQCIVGNGNSNNNNNNKLTTLSSNGADENHHLMITSAPQKFLEYTQTENGDFMITEKLLSTHHHHHHQQHHHSNNNNNHPNVSHEEEIVEEIHDSDDNSYNVKFVEINEPLTFNLSTSDNGSGKYHQEEHYTVIEESEVEQINSFNESQGSSSNIESHAPKKSGVKVISNVKLTSAQILSPTMQDIINQYNNNNNASSTSKNNNNNNSNNNKTQTEKEMQIEQPVVDIVHTEITDTEDDDDDDDDDDDVEMKEDINKNDTKALIQCTETLNLSSNDKEEASSSSSSACTTSVIRKTTTTSIDAIPSTSKAVDEIKEQKLKPEPEPSTSAESLRKTSSSNVVFNSTNRLKQKEIYKQPKKLVVKLKKPLQEAGGECTSSTSIQTVAAAATADNKDITQIKNENVERETITTTQLHDHDDENVDTQKHSAMTERDSTVYKVESNEQFTVTFLDQHDYEPIKKITVTPEIHHDSETNQSVMSMELEPETSVVAVKREQTDNELPIIVKTEMSSCSASSMASNSQSSSCSRSPSRINIEKVSSININESSPINFLYQNDRVRFSPPLSPYVYMKTFSTGEDQPKQETDASWNNSSSVVTQNSDQNSTCSRYTPSFDDNRSNYTDIDVNVKTSRNDVHIRAPSTDSLNIRTDEKMPARGEISEQESNGEIEQPWHHPYFQLQAYPSSYDMNTAQECWNLSKADSQNACDSNNIQNVIINFPPLNGQEDIKAPDLLKTIMQTVTKQEPSGINDEASGSNSNLIVKKNRSFRCPECSKVFMKLRARNRHMEQEHPNFRRVKKIKPAPTATQTSKSEATVFPTSSSSALVDWNATSTTQEQEVKVLSIIKHEPSTSAAVLVKNEMNRMLISTTGSIKMEMDRLLLEPSTSSTTQQMSTLGLKIKRTYMCAKCNEQFRTLKLLDKHFQIHPAECTLCQKTFNSWNTFSLHLKHHLNIRVHACRFCPKRFVQRQRLVEHERIHTGSLPIKCPDCDERFRRYSNMLHHRARVHLNKKAKQEDYVCDCGEIFQTKAKLEWHQETHENKPKPCPYCRERFTHRNSLTRHIRLSHTEKYVFVKSKAVNCPICSCTYLPSSIKAHMATHQLSNKEFSCSICSKQFSTKWNLKQHHWTHANRSSKPFQCNVCPSAFVRETDYTTHMNAHRSIKPFTCNTCGKRFVRKYNWLRHSREHEREKKFTCDICNKKFHRAYYLTEHKRVHTGERPFSCTICGKTSATKTNHNKHIKIHHARDPLTAEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00319944;
90% Identity: iTF_00319944;
80% Identity: -