Cten014605.1
Basic Information
- Insect
- Chironomus tentans
- Gene Symbol
- dsx
- Assembly
- GCA_963573255.1
- Location
- OY754304.1:47210498-47211538[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3 2.1e+03 -1.1 0.2 33 45 3 15 2 17 0.80 2 2 4.2e-19 6.7e-16 58.1 9.6 3 47 40 84 38 84 0.96
Sequence Information
- Coding Sequence
- ATgagaaaatgtaaagaaatatataataaaCAAATCGTAACACAACAACATTTTAACATTGATCAAAAAGAATATGACGTTGAAAGTTCAATCATGAATGTGAAATCTCGAACACTACCAAACTGTGCTCGCTGCAGTAAtcatggattaaaaattaaaatacgtGCTCATAAAAGATTTTGTGCATATCGATATTGTAATTGTGAAAAGTGTAAAATAACAAATGATAGACAACGTGATATGGCATTACAAACGGCATTAAGACGTGCACATGCACAAGATGAATCACGTGTGTTACTTCAAGGTCAAATTCCGCAACAGCCAATGGTTCCATTGCCAAtagcaattaaaaatgaatttgttaaCCAAGAAAGTGATGACGTTGACAATGATAGACCCGATAGTGGATTTGATCCTCgagaattttatgataatggGGAATCTTCAACTTCGCATGAGGAGCCTATGGACAGGGAACCaggaattttaaatcatcCACAATTTATTGAAGAACATCTTGATAGTGGCACACAACATGATTTTATATCAAAAGCTGAACATATTGTTGCAAAATTCAACTGCGTTCATGAGATGGTACCATTGATGTATGCTCTAGTCAAATCTACAAGAGGAAATCTTGATTTGTCGGAGCAACTTCTTAATGAAGGTCGAAGTGTCATCCAGGAACATGttagaaaaaacaatttgaataTGTTTGATGGTAAACCAATGAGACGATATTGA
- Protein Sequence
- MRKCKEIYNKQIVTQQHFNIDQKEYDVESSIMNVKSRTLPNCARCSNHGLKIKIRAHKRFCAYRYCNCEKCKITNDRQRDMALQTALRRAHAQDESRVLLQGQIPQQPMVPLPIAIKNEFVNQESDDVDNDRPDSGFDPREFYDNGESSTSHEEPMDREPGILNHPQFIEEHLDSGTQHDFISKAEHIVAKFNCVHEMVPLMYALVKSTRGNLDLSEQLLNEGRSVIQEHVRKNNLNMFDGKPMRRY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -