Cten005036.1
Basic Information
- Insect
- Chironomus tentans
- Gene Symbol
- retn
- Assembly
- GCA_963573255.1
- Location
- OY754302.1:54328389-54355567[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-25 4e-22 78.6 0.0 2 89 191 276 190 276 0.96 2 2 0.84 1.9e+03 -0.5 0.1 13 35 417 437 408 437 0.78
Sequence Information
- Coding Sequence
- ATGCGTGATTGTGAGTCAAGTGATGAAGGTGTCAATGTAAATGGAATGAACGGATCATCAGTCATGGATTTCAATAACAGAGGAAGCCCAGAAAGGAACTCAGAAATGACagACACACCATTTCCACCAAATCATCCACTGGGCATGCTAAGCAACCTTTCAGCACTAAACATGAGCGTTCCGACTCTCCAATCCTTTCAACAGCACAATGACGTTttggagaaaataaaaatgcaagtGCGCGACATGAAGGTCGGATTCATGAACTCGGATTTTTCAGCACTACATCCGTCATTCACAAGCACACTACAGAGCTCTTTGGGCTTTAATACACATCAAGTATCGCaagcacaaaataataataataataatcagaatTCATCTCATGGTAACAATGAGTCATCGAATGgctttccattttcatcacCGACAGCAGCAGTTAATAAAGATGCCTCAAACTCATCAACGTCAAGTGAAACGTCCAATTCGTCACAACAAAACAATGGATGGAGCTTTGAAGAGCAATTTAAGCAAGTGAGACAGTTATACGAAATCAACGATGATCCAAAGCGTAAATTATTTCTCGATGATCTCTTTTTGTTCATGCAAAAGCGAGGAACTCCAATAAATCGACTTCCAATCATGGCAAAATCAGTTCTAGATTTATATGAACTTTATAACTTGGTGATAGCTAGAGGTGGTCTTGTTGATgtaattaataagaaattatGGCAGGAAATAATTAAAGGACTACATTTACCCTCGAGCATCACAAGTGCTGCATTTACGCTAAGAACACAGTACATGAAGTATTTGTATCCATATGAATGtgagaaaaagaatttgagTTCACCGGCTGAATTGCAGGCTGCAATTGATGGAAACAGACGTGAGGGCCGTCGAACAAGTTATGGGCAATTTGAATCACAAATGCAACAGCAGTTACAGATGCCACAACTTCAAAGGTCGCCGATTCCAAATAGTCTCCAGCAAATGTCACCGTTATCACTTGTGACACATGCAAGTCAGCAAAATCCTCACCATAGACTGATGGGAGCACCAAGTATTGGTCAACTTCCAAGTATAGTTCCACATGATATTGAGCAGCGAATGCTTgaatacattaaattattcCAAGCACCAAAAGATTTGAAACGCCCACAAAGTCCCGATGTTTCAAGGGAAGCATTAAATGCTTTGGAAATGTCTCGAATGGCATTATGGAATATGTATAATAATACAAGTCCACATAATCAGCACAACAACCCTAGTCCACCAGAAGTACAACATGAAGCACTGAATTTACATCAACGAGAATCTCCATCTCCAATTCCATCAGCTCCATCACCAATTTCCATCAAACGTGAACGTGATCTTCATGACATGAATGAATATCCACCAGCAAAACGAGGCTTAATTCGATCAAATAGTGATCTCAATAGGAAGTCATCAATCactaataacaacaataataaatatgatCATCACATTGGCAACAACAATAATTCTCAAGTGACGCCCATAAAAGACAATAGCAGTAAGAATCGATCAGAATCACCTTCGATAACATCACAGCAAATgcaaaacaatgaaaatggaaCTCATCATCTTCAGTCGCCTGTAAGACATCACAATAAACAGAATGGACTTGATTCTATTGGCACGACAATTTTGAATGGAATGCAGTTTAAAATCGTCAGTAAAGAAAACTCATCGACTGGAGAGCCACAGCTGGTTGTAAAATTGGAAGTAAATGGAATATTGTTCGAGGGTGTCCTTTTTCCAAATCCATCAAACTCATCACCAGCATCAGCATCAACAACTCCTTCAACGGAACCAATGATATCACCAGTCAAGCATTCATCACCGAATCGGAACTCATTAAATGATGACCACAAGTTAACGCAACAAATGGTCTCGTCGTCATAA
- Protein Sequence
- MRDCESSDEGVNVNGMNGSSVMDFNNRGSPERNSEMTDTPFPPNHPLGMLSNLSALNMSVPTLQSFQQHNDVLEKIKMQVRDMKVGFMNSDFSALHPSFTSTLQSSLGFNTHQVSQAQNNNNNNQNSSHGNNESSNGFPFSSPTAAVNKDASNSSTSSETSNSSQQNNGWSFEEQFKQVRQLYEINDDPKRKLFLDDLFLFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSSPAELQAAIDGNRREGRRTSYGQFESQMQQQLQMPQLQRSPIPNSLQQMSPLSLVTHASQQNPHHRLMGAPSIGQLPSIVPHDIEQRMLEYIKLFQAPKDLKRPQSPDVSREALNALEMSRMALWNMYNNTSPHNQHNNPSPPEVQHEALNLHQRESPSPIPSAPSPISIKRERDLHDMNEYPPAKRGLIRSNSDLNRKSSITNNNNNKYDHHIGNNNNSQVTPIKDNSSKNRSESPSITSQQMQNNENGTHHLQSPVRHHNKQNGLDSIGTTILNGMQFKIVSKENSSTGEPQLVVKLEVNGILFEGVLFPNPSNSSPASASTTPSTEPMISPVKHSSPNRNSLNDDHKLTQQMVSSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01249855;
- 90% Identity
- -
- 80% Identity
- -