Crip002220.1
Basic Information
- Insect
- Chironomus riparius
- Gene Symbol
- -
- Assembly
- GCA_001014505.1
- Location
- JXPV01005912.1:1017-2707[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6e-08 0.00012 22.0 8.2 1 42 36 79 36 84 0.82 2 2 4e-13 8.3e-10 38.5 13.0 1 41 110 150 110 155 0.94
Sequence Information
- Coding Sequence
- atgaatatttttgataagcCATTATATATGCAAAATCCCATcattaaaatggaaaactGTTATGTTCAGGAGGATGTAAGTGTCAAAAAAGATAAGgaaacaagaaaagaacaaacaTGTAGTTTATGTCAAAATCATGGAGAATCCATGAAGAAAAAAGGGCATAAATGTGATTACGACAAAAAAGAGCATTTTGATGATTGCAAACCATGTAGAATGACTAAAGACAGACGATTTGCTGCTtcaaaagataagaaaaataattatcaaaagaaaaagaatttcgGTCATATTTTGAATACCGAACCTTCATttggaaaaatgagaaaggatCAAAAGTGCAGAAAATGCGCAAATCACCATGAAATAAAGAGTATGAAGgagcataaaaattcttgtCCATACCTCAACTGCCCATGTGTTGATTGCTTAGAGACAGAAAAACGCCGATTTGCTGTTAAACATGAAGCAAAGGCAAAGCgtcaaaagaataaaaatcttattaaacaagaaaatgatgaatctATGTCATCCAGTCCATCTTCTCCTAACGACTCGGGATACAATTCTGATTTATCGTCTTCATCCTTAAAAAGCCATTCCTCGAAATATTCACTGCCTTCAGTTTATGATTCTATTCCATTTTTTGGTTATTCAAATATGAAATGCGAAGCTACAAATTGGAAGTTAAGTCAAACCTCATCATCTCCAGTCAATCCTGCCACCTTTAGTCTAAATACTGGATATTCTAATATTGAGTGCAAAGAGGAAACTAAACTCTGGGTATTCAATCAATCAccaaattattcatcatcttCAATTAATTCTGGTTTTTTTGAACCAATTCCATATATTGGACACACTGATTTTAAATGcaaagaagaacaaaattgCGATATGAATGCAAATACTACTGATTATTATACTAATACATCTTCAAACACCTTCCAAGAAATCACCCGTTTCCCAATTAAAACTGAAGCAAGTGAACTTTTTGTTCGAAATTGCATAAACTTTACAGCAGACGACAGTCTGCTTCAAGCTGTAGTACAAGgtcttttaaataatgaattcgATATAGAAGAAGTTTGTGAATTATGTGACGAttcaattgtattttaa
- Protein Sequence
- MNIFDKPLYMQNPIIKMENCYVQEDVSVKKDKETRKEQTCSLCQNHGESMKKKGHKCDYDKKEHFDDCKPCRMTKDRRFAASKDKKNNYQKKKNFGHILNTEPSFGKMRKDQKCRKCANHHEIKSMKEHKNSCPYLNCPCVDCLETEKRRFAVKHEAKAKRQKNKNLIKQENDESMSSSPSSPNDSGYNSDLSSSSLKSHSSKYSLPSVYDSIPFFGYSNMKCEATNWKLSQTSSSPVNPATFSLNTGYSNIECKEETKLWVFNQSPNYSSSSINSGFFEPIPYIGHTDFKCKEEQNCDMNANTTDYYTNTSSNTFQEITRFPIKTEASELFVRNCINFTADDSLLQAVVQGLLNNEFDIEEVCELCDDSIVF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -