Crip008430.1
Basic Information
- Insect
- Chironomus riparius
- Gene Symbol
- -
- Assembly
- GCA_001014505.1
- Location
- JXPV01005666.1:924-1787[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-12 3.2e-09 36.6 6.5 1 46 19 68 19 69 0.86 2 2 8.8e-13 1.9e-09 37.4 10.8 4 39 96 131 94 138 0.92
Sequence Information
- Coding Sequence
- atgtCTCATTTTTACAGTTCATTGaataagcaagaaaaaattaaggaagaacGAAAGAAACCAACATGTAGCATGTGTCGCAATCACAATGTGTTTAAACCTTCAGCCGGTCATAAGAATTTGTGCGCTTTTGACAATCCAGAGCATAGAATGACATGCTCAAAATGCACATTAACGTACGAAAGGAGAGTATCGTGGGCGAAAAAGATCGATAAAAGAcgaaaaatccataaaatattagaaataaCTATTGAGGCACTTCCAGGTAGACAACGTGGACAGCAATTGTGTAGTAAATGTTTGACTCACGGAATCACAGCGATCAATAAGAATCACAAGAAATTGTGTCCCTATAAACTGTGTAAATGCGACAAATGCATAGAAGTCGTTGATTCCTGCAAAGCATTTAATAAAGAAGCTGGAAAAATTCGTGAAACTACGCCAAAAAGTCTACCACAAAGTAATAAACCAGTTGCTGAAATCCCAATTTCTGAAATGCCAATTATGGATGAAAATTGCATTGATCCAGAAAACGAACaagtaaatcaaatttatttagaCTTGCTGACATCAGAGGAATCAAATCAGCTTGCCTCCATTGACATCCAAGGAccaaaagttgaaataattgaCGACACAAATATGGAAGAATTTTACAATGACATTATGGACttaatggatttaaatcaaatggaagtgaattatgagaattcatttgaaaaactAGAATTCTTTGGACCTGATGCATCGAGTTATTATTCAGCACCGAGAATTTTGAGCGATGAGAACCTAGAGAATTCCATTGGAATGGATTTTATCAGCGATGTTGAATCAGatcttaatgaatttttgttcNGGAAGTGA
- Protein Sequence
- MSHFYSSLNKQEKIKEERKKPTCSMCRNHNVFKPSAGHKNLCAFDNPEHRMTCSKCTLTYERRVSWAKKIDKRRKIHKILEITIEALPGRQRGQQLCSKCLTHGITAINKNHKKLCPYKLCKCDKCIEVVDSCKAFNKEAGKIRETTPKSLPQSNKPVAEIPISEMPIMDENCIDPENEQVNQIYLDLLTSEESNQLASIDIQGPKVEIIDDTNMEEFYNDIMDLMDLNQMEVNYENSFEKLEFFGPDASSYYSAPRILSDENLENSIGMDFISDVESDLNEFLFXK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -