Crip015131.1
Basic Information
- Insect
- Chironomus riparius
- Gene Symbol
- Git
- Assembly
- GCA_001014505.1
- Location
- JXPV01020656.1:8190-11647[+]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-05 0.23 11.7 0.3 15 45 447 484 444 492 0.80 2 2 1.5e-05 0.14 12.4 1.6 14 48 624 658 621 667 0.91
Sequence Information
- Coding Sequence
- ATGTGCTGTATTAATGATTATAAATGTGGAATAATGTCGCGTGGAAAGTCTAGAGGTGCTGTAGATATTTGCGGTGATTGTGGATGTGCAGATGCTCCTTTTGCATCATTAAATCGAGGCATTCTATTATGTAATGACTGCTCATCTGTTCATCGACAGTTAGGAAGTCATATAAGTATTGTAAAAGCTTTAAGACAAGGACAATGGAATCctttacttttaaattatattcatcaaattaataatcatgGTTCAAATTCAGTTTGGGAACATTTGTTGCTGGATCCAAATTCTAAGCAGCAAAAGAAAAAACCAACTCCAAAAGAcacaattcaaacaaaatcagCATTTATACGTGCTAAGCACATGAACCTCGAGTTTGTTCTAAAACCCAACTTGCAAAATGAGAATGCAACAAGTATAGAAACGGAACTAAGTAAACAGCTTCATGCCAGTGTACGATCTGCCAATTTAGAAACTTCTCTTCGTTTAATTGCTCAAGGTGCCAATTGTAATTATGTTCACGTTGAAAAGAACTCGACAACTCCTTTACATGTTGCCGCAAAATTCGGTCAAAGTGCACAAGTTGAACTGCTGCTGTTGTATGGCGCAGATATAAACTCAGTTGATGGCAATGGAAATAATGCAATTGAACTTGCCAAACAGAATAACTTTGCTCAACTCGCAGATAGATTAGTTGAAGCAAGTTATGAAGTCTCTGAccgaattatttactttttgtgtgGAAGGAAACCCGATCATGCTAGTGGACAGCATTTAATTATACCCGAACATAGCAAAGTCGAGATAaatgagcatttaaaaatagctcgtggaaaattgcaattaataCCGAATAAAATGTTCGAGGAACTTGTAATGGATCTATACGAAGAAGTTGATCGACGTGAGACTGAAACTATATGGTCCACATGCTCGACAAACCCAGAGATAGGAGGTGTTCCATTCTTGCCAACAAATCCACATTTATCAGCAACACGAAATCAAGGACGCCAAAAGCTTGCGCGTTTCTCTCACGCCGAATTTTGTGGACTCTTGAATGATATTTTAGTTGATGCTAGACGTCGTCAAAATATCGCCAATTTGAGGCCACTCGAACAAGtgcaattgaaaaataagaatcgtGAATCGACCAATTCCGATGATGAGCCACTTTATGATGCTGTTTGCGAAGATGATGATTACAGTCAATTGCCTCCGTCAGTTACTCAACAGaatTCAGGCAATAATGTCAATCCAGTTCAACCTTCGTCAACGACAACATCATCGACATCAGCAACTACATCAACTGTTATAGCACAGCCACAAACTGAGGCCgaagttgaaatattaaaaaagcaattaaaacttCAAGATCTTGCAATATCCGAATTAAAATCGATGATTGAAAAGTTGTCTTtggaaaatgcatttttaaaaagtgcgCAGTCTGATTCACGTTCAATGTCTTCCACTGACGTGCAATTACGAATTCATGATTCACCAGAAATACTAGTGGATGGTGAGTCATCATCGAAAATGATTAGTGCCAATATCAATTCTATTATGAGTGCTAAAAGACCTGTATCTATGTATGAGGCTAGACAAGTTCCTCGTGATGATATTCGTCCGCCAGTTACACAAAGCCTTTATTCAATGGCTTCAAATTCGTCTGGTTCGTCGACATCAAACACATCATTGCCATTGGTTGAAGAAGTAACGAAAAGAACTGAAACTGTTACAAGACAAATTCAAGAACTATGGCTTGCTATGCAGGACCTAACgttaaaagaaaagtttattccTTGTTCTGAGCGTATTAGGATTGGTGTGTCTGATCTTATTGCTATATTTCCAGCAAATTTAAGCGAGGAACATGAAGTTTTACGAAATGCTCTAAGacaattaaatgttaatacaaattccattcaaaatgAATGCTCAAATTTACAGCGTGCCCTAAGCTCAGAAAATCCGTCAAATATTGACATGCATTTGCAGCAAGTCCGCAATTGTGCCTACAACTTGGCAAAAGCGACTAAAATTTTAGTAACACAATTTCAACAATGA
- Protein Sequence
- MCCINDYKCGIMSRGKSRGAVDICGDCGCADAPFASLNRGILLCNDCSSVHRQLGSHISIVKALRQGQWNPLLLNYIHQINNHGSNSVWEHLLLDPNSKQQKKKPTPKDTIQTKSAFIRAKHMNLEFVLKPNLQNENATSIETELSKQLHASVRSANLETSLRLIAQGANCNYVHVEKNSTTPLHVAAKFGQSAQVELLLLYGADINSVDGNGNNAIELAKQNNFAQLADRLVEASYEVSDRIIYFLCGRKPDHASGQHLIIPEHSKVEINEHLKIARGKLQLIPNKMFEELVMDLYEEVDRRETETIWSTCSTNPEIGGVPFLPTNPHLSATRNQGRQKLARFSHAEFCGLLNDILVDARRRQNIANLRPLEQVQLKNKNRESTNSDDEPLYDAVCEDDDYSQLPPSVTQQNSGNNVNPVQPSSTTTSSTSATTSTVIAQPQTEAEVEILKKQLKLQDLAISELKSMIEKLSLENAFLKSAQSDSRSMSSTDVQLRIHDSPEILVDGESSSKMISANINSIMSAKRPVSMYEARQVPRDDIRPPVTQSLYSMASNSSGSSTSNTSLPLVEEVTKRTETVTRQIQELWLAMQDLTLKEKFIPCSERIRIGVSDLIAIFPANLSEEHEVLRNALRQLNVNTNSIQNECSNLQRALSSENPSNIDMHLQQVRNCAYNLAKATKILVTQFQQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00320348;
- 90% Identity
- iTF_00320348;
- 80% Identity
- -