Csup007602.1
Basic Information
- Insect
- Chilo suppressalis
- Gene Symbol
- -
- Assembly
- None
- Location
- chr21:10910427-10923615[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-21 9.7e-18 64.5 0.1 174 275 15 116 2 116 0.93 2 2 0.5 2.5e+03 -2.5 0.0 251 272 137 158 122 170 0.58
Sequence Information
- Coding Sequence
- ATGCCTTGGCAACACATTTCATTCATAGGAGAAGCTCTAGCCCGCGGCACATATCCAGCGATACGTTCCCGCTTAGCGACGGCGTTAGGCGCTTGGCATCCAGCCGACCCCTCAGCTAGGACTCTGCTAGCGGCCTGGAGACACGCGTGGGGCTCCGCACTGACTGCCATGCTGCACCAACATATAGTTCCAAAGCTCGACCACTGTTTGCAACACACGGCTTTGGAGTTAGTCGGCGCTGGCAATGCCGCTTGGCTTTGGTGCGTGGATTGGCTGGAGTTGCTTGGCGCGCCAACCTTAGCCGCCATAGCTTCGCGCGCGTTGCTGCCACGCTGGTTGGCCGCATTGGCAGCTTGGCTGAACACTAATCCGCCACACGCTACTGTCCTGGCATCTTATACAGATTTCAAGAAAATGTTCCCAGACGAGGTTCTAAAGGAACCAGCAGTGCGTGACGCGTTTCGTAAAGCTTTAGACATGTTGAATCGAAGCACAGACATCGATTCTGTGGAACCCCCACCACCTCCTCGATTCACTATCACAGAAGCACCCAAAGAAACGTCCAGAATAGCAGACGTTCTAGCTTCAACTACCCAACAGAAATCCTTCTCAGAACTACTCGAATCACGGTGCATAGAAAAAGGAATAACATTCGTACCAATAGTGGGCAAATCTAGGGAGGGAAGACCCCTATACAAGATAGGAGACATGCAGTGTTACGTCATCAGAAATGTGATTATGTACTCTGAAGATAACGGCAGGACTTTCGGACCTATTAGTATGGACAGACTTTTGACGATGGTTGAAGATTAA
- Protein Sequence
- MPWQHISFIGEALARGTYPAIRSRLATALGAWHPADPSARTLLAAWRHAWGSALTAMLHQHIVPKLDHCLQHTALELVGAGNAAWLWCVDWLELLGAPTLAAIASRALLPRWLAALAAWLNTNPPHATVLASYTDFKKMFPDEVLKEPAVRDAFRKALDMLNRSTDIDSVEPPPPPRFTITEAPKETSRIADVLASTTQQKSFSELLESRCIEKGITFVPIVGKSREGRPLYKIGDMQCYVIRNVIMYSEDNGRTFGPISMDRLLTMVED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00433166;
- 90% Identity
- -
- 80% Identity
- -