Basic Information

Insect: Chesias legatella
Gene Symbol: -
Assembly: GCA_947359385.1
Location: OX375778.1:4394413-4402951[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 8.9 5e+02 1.5 0.6 1 23 54 77 54 77 0.94

2 21 1.3 73 4.2 2.8 1 23 84 107 84 107 0.97

3 21 5.8 3.3e+02 2.1 3.6 1 23 185 207 185 207 0.96

4 21 0.0017 0.096 13.2 1.0 2 23 213 234 212 234 0.97

5 21 2.1 1.2e+02 3.5 1.5 1 23 240 262 240 263 0.94

6 21 0.19 11 6.8 2.9 2 22 503 523 502 523 0.95

7 21 4.9 2.8e+02 2.4 0.4 1 20 618 637 618 640 0.70

8 21 2.8 1.6e+02 3.1 2.6 2 23 777 798 776 798 0.95

9 21 0.032 1.8 9.2 0.9 2 23 877 898 876 898 0.96

10 21 0.031 1.8 9.3 0.5 1 23 906 928 906 928 0.97

11 21 0.18 10 6.9 5.6 1 23 967 989 967 989 0.95

12 21 0.00024 0.013 15.9 4.0 1 23 998 1020 998 1020 0.99

13 21 0.056 3.2 8.5 0.6 1 23 1102 1124 1102 1124 0.98

14 21 0.076 4.3 8.0 2.4 1 23 1180 1202 1180 1203 0.92

15 21 0.025 1.4 9.6 0.7 2 23 1209 1230 1208 1230 0.97

16 21 0.046 2.6 8.7 0.6 1 23 1298 1320 1298 1320 0.91

17 21 0.016 0.91 10.2 1.4 1 23 1326 1348 1326 1348 0.92

18 21 0.0067 0.38 11.4 2.6 1 23 1438 1460 1438 1460 0.97

19 21 0.00017 0.0094 16.4 1.4 1 23 1466 1488 1466 1488 0.99

20 21 0.31 17 6.1 2.1 1 23 1577 1599 1577 1599 0.96

21 21 0.0028 0.16 12.6 3.7 1 23 1610 1632 1610 1632 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	8.9	5e+02	1.5	0.6	1	23	54	77	54	77	0.94
2	21	1.3	73	4.2	2.8	1	23	84	107	84	107	0.97
3	21	5.8	3.3e+02	2.1	3.6	1	23	185	207	185	207	0.96
4	21	0.0017	0.096	13.2	1.0	2	23	213	234	212	234	0.97
5	21	2.1	1.2e+02	3.5	1.5	1	23	240	262	240	263	0.94
6	21	0.19	11	6.8	2.9	2	22	503	523	502	523	0.95
7	21	4.9	2.8e+02	2.4	0.4	1	20	618	637	618	640	0.70
8	21	2.8	1.6e+02	3.1	2.6	2	23	777	798	776	798	0.95
9	21	0.032	1.8	9.2	0.9	2	23	877	898	876	898	0.96
10	21	0.031	1.8	9.3	0.5	1	23	906	928	906	928	0.97
11	21	0.18	10	6.9	5.6	1	23	967	989	967	989	0.95
12	21	0.00024	0.013	15.9	4.0	1	23	998	1020	998	1020	0.99
13	21	0.056	3.2	8.5	0.6	1	23	1102	1124	1102	1124	0.98
14	21	0.076	4.3	8.0	2.4	1	23	1180	1202	1180	1203	0.92
15	21	0.025	1.4	9.6	0.7	2	23	1209	1230	1208	1230	0.97
16	21	0.046	2.6	8.7	0.6	1	23	1298	1320	1298	1320	0.91
17	21	0.016	0.91	10.2	1.4	1	23	1326	1348	1326	1348	0.92
18	21	0.0067	0.38	11.4	2.6	1	23	1438	1460	1438	1460	0.97
19	21	0.00017	0.0094	16.4	1.4	1	23	1466	1488	1466	1488	0.99
20	21	0.31	17	6.1	2.1	1	23	1577	1599	1577	1599	0.96
21	21	0.0028	0.16	12.6	3.7	1	23	1610	1632	1610	1632	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGTCGCTGAGCGCGCTAGTCGGCGAGGTCACAACTATTGCGCGCCCTTTCGAAGGTCGCTTCTCCGTCGACGTCTCTTCCGAGGCATCGTCGGACGCGGCCGAAGAGTACGAATTGCCACAGTGCAAAATAAGAAGGAACTATAATTGTGCGAAGTGCACTTTTTACACGCAAAATCCGCGCGCTTACCTCGTTCACACGCGAGACGTACATTTCGGAAGATTCAAGATATACGAGTGTCAGTTTTGTATTTATGCTTCGAGGCACCAACAGAAACTGTTGAGACATACAAAGATGGTGCACGGAACGACGCCGCCGTCGCCGTCGTCCACCGTCAAACTGGAGATGGAAGTACCCGCCGAGGGTGCAGCGGAGAACGTGGAAGATCTGATGGAAGAGATCGAAGAGTGCGACGATTCGCAGATAGACGTAGACGAGGGACGGAACAACCGCGCCGACGCCGACGCCGACGACTCACAAATATATGCGGTCAGAAGTTCCGACGCCGGCCTGCCTAAGGATAAAGGACGTTTCTTTTCATGCGACAAATGCAACTACGTGACTCACATAAAAGCGAGGTACATGAAGCACGTGAAGTACCACTCGATGCCGATGATCAAGTGCACCATGTGTGATTTCCGGACGCCGTACAAATGGAATTTGGACCGGCACATGAAGAACCACGGCGGAAACGGGAGTTTCGTGTGTTCCAAGTGCACATTCACGGCGGACATCAAGCAGAGTTTGACGGTGCACGAAATGAATCATCACACGCCGCCCGTGGGCCAATCGTCGGCGAGCCGCCGCCGCAACCGGGTGGGAGCCAGCGACCTGACGTCCGCGGACGCGGCCACAGTGTTCCCCAAGGAGGAGGAGGGGAGCGGCGACTCGCACTCCTCGCACTCGCACTCGCACTCCGTCTCGGACACTATGGGCTTGCAAGACGCCGAGAGAGATATTGTTAGCTGCAACAGCGATTCTAATGACGTAGCATCCTCCGAAGTCAGTCCAAATAGAGAGGTGCAATCAGCTCAAGACTCACACGGCAATGTATCCCCTCAGTCAGGAAACGAAGACAAAATTCAGAAACAAAACAGAAAAGCCCCCAGGCCTATCCCACAGTTGATTCCGCTCAACACGTCGACACCCAATCAAAACAAAACAACGGGCGAACCGCCTGCGAAGAAATTCAAAGAATCGACATATTCGGAGCTGGCGTGCAACTTTGAAAACTTGCCCGACGACATCACTTTGATACCAGTGAACAACACGCCTAAAGAAACCACGCTTCGTAAGAAAAACGAGTCATTTTTCGACAAGTTGAAAATGAGGCTACTGACAGAAACCGGCGAAGAAGGATCACTTAAATGCAAAAGTTGCGGTTTCGAAAGCAAATGTTTATCCGAACACTCTGTGCACGAGAAAAACTGCGCGGCACAAGCCGGCCGCGTGATGATGAACACTTCGCATTCCAGTATGGGCTCGACTCGCTGCCAAAACTGTAGACATCGATGTAAATCTAGCGCAGATCTGTATGTACACATGCTTACTTGTGTCAAGAAAGAAAACCAAAATACTACAGAACCAAAACGCGAAAGCAATGAAGCGTCGACGTCCAGTTACGACAAAGATGCAGAACCACACCCCATGGAGAATGTAGTTTTTGTTTGGAACAACATAAATGAAGGCGTTAAATTCGAAAGACCTCTAGACATTAACATCAACGATGACTCAACCATGCCAGAGTCGCAAAGAAACTATGATTCTGAAATCGTTGACGAAAACGAAGGTATGAATTTATCGCCTAACAGTTTGAGTCTCGGGAAGAATGTTTACAAATGTCCCGATTGTAAGTTCTGGGCCGCCACAGCGTCGAGGTTCCACGTTCATATAGTGGGTCATTTAAACAAAAAACCATTTGAATGCTCACTGTGCAAGTACAAGTCTAACTGGCGGTGGGATATAACGAAGCATATTAAGTTAAAGTCTGCGCGAGATCCGGACCATAATGACGCTAAAGTGTTGATGACTGACGAGACCGGAAGAAGGAACTACAGCAAATACAACAAGTTCTTAGCTGTTCCAGTATTCAATGAGAATGGTGAAAACGAATTTCACTACATCGATCAGAATACAACAGTCGATGCGTCGATGGATTTGGACGAAACGTTAAATGATTGTAACGATGTGATTCATACGTCTTACGAGATGCAACCTCTCAACTTGCAAACGCAACCGGACGCAACGGAGTTCAAATATGGACACATGGAATTTGCTACCCTCGAGAAGAAACCCAAAAAGACTATGTGGAAATGTAAAAAATGCAATTACAAGGATTGTTCCAAGGAGGCGTTATTGGAGCATGTGAAGCAGCATCAGCACTCCAAAGTCGAGTGCACCGAGGAGTCGGCTCCGAGCGGCAAGAAGGCGGACGCGCCGGACCCCGCTGACCTGGCGTACCGATGCGGCCACTGCAACCAACTGTCCAACTGGAAGCACGTCATACAGAGACATTGTCGATTGAAGCATGACGGCGTTATAAAAGTCGTCACCACGGTGAAGCCGAAACCCGACCCGGCGCCGGCAACAAACACTGAAACATACAACGACTACTGCACCAAGTGTCCGTTCAAGACTAACGACAAGAAACTACTGATAGAACATTTACAACAACATCAACCTTCGTCGCAGTCCATTTTCAAATGTTACTTCTGCCCTTACTTCGTCAGAGATGAACAAGATTTGATACAACACCTTTTACTACATGGTATCACCGACCCGGAGGATTATATCTCGAAAGCCATGGGATGCAGATCCCCTTTGCCCGACTCGTCGGCTCTTCACGACACACTGGCTTCTGCCCCAGGTACCACGAAACGCCACAAGTGTCACGAATGTCCATATGAAACCAACAGCAAGTCCCAATTCATGTATCACGAGCAATTCCATAGATCTACATCGGCTGAAACCCCCTACAAATGCCCCGAGTGCAACTACAGTGTGTCGAAACGACATTTGCTTCATCAGCACCTAAGAGTTCACGGGATTATTTCTAAGAAAAATGAAACCGAGGCAGAACTAGAAGCGTCGACGTCATGCCATACCAAACCTGACAAATCTGATAGTTTCAGCGAAGACATACCTTACGTATGGGTTTCGGCAAGAAATGAATTCCACAAAATGTACAAATGTCGCTACTGCTCTTATGTGAACTCGCATAAATGTAAAATACCAAACCATGAGAAGTTGCATTGTCTCGGTTTTGAAAATAGCGAAGTGATCATTTACAAATGTTTAGAATGTAAAATGAAGTATGATAATGCCGGAAGACTGGCGGAACATTCCAAGAAACACGGTCTTCTGTACGGTCGCATTTACAGTACCGTCGAGGAAGACATTCCGGATGAAGATCAGATAGCTAAACTTCGTAGAGTTATTGAACTTGAGAAAAGCACCGCAGGCGATGATTCGACTACAGAAGATAACGCAACAAATGATTCCAACGAAATGAAAATACTGTACTTCTGTCAGAAATGCCCAGCCAGATATTTTACAGAAAGTGAACTCAAAGCTCATGAAACATTCCACCATTTTGCTGATGCAAACAAATGCAAACATTGTGAATTTTCAGTGCGGGAGGAATCCGATTTAGTCGTCCATCTGTCCGTCCACTCGGATGAGCATCACATACGGACGAACATGCTGAAATTCATTCATATTTCACACTCCCATTACAGAGAACCACGATTAGAAGCCAACCGTAATATCGATTCTTCAGACGTCAGCTGGTCCGTTGCAGTGAACCTCAAAAACGCTGAAAATACGGAGCCGCAACAAAGAAAACATGCAGATTCGAAAAATGTACCCAAACAATACTATTGCAAAGAATGCCCGGCGAAATTCTTTAAAACCTCTGCGCTCACGTACCACGCGGGATTGCACGGCGGTGAAGGCGAGCATAAATGTAAAAAGTGCAGCTACTCCGTCAAGAACGTCGGCAATTTAGCTAAACATGAAGTTTTACATGAAAATGAAAATAAAAACGCAAATTGCGATTACGAGTCCGGCGATGATATGGACTATAAAAACATTCCCCTCTCGGGAACAGACCTGTTCCAGAGAAAAACTGAAGCTCAAAAACGAGTATTGATAGACAAAGACAAACTGGTTAAACCAAATGACCATTTCCCGCCGGTGCTCCAAGCAGATCCTCAATTCGGTTATCTTATGCACGGCAATCCCGAATTTATATATCCCACTTACCTGAAGAATGGACGTCAAAAGGAAAAACGATACAAATGCCATAAATGCCCTTCAGCTTTCGAAAAACGTGAGCAGTACAAAATACATCTATCGCTCCATGGCTCGAAACAAAGATATAAATGCGAACTGTGCGATTATTCTGTAAAATATTACGCCAACTACGTACAACACATGAGGAAGCACCAAATGAACGATGAAGCACAAGCCGAAAGAATGAAAGGAAGCAACGGTGACCCAGTGAAGGAAGAAGTCAAACAAGAAGAAAGCGCGGACAACATTACGCTGGCAATCAAGACAATGCCCAAGGGAACGCCAAAAACTGACTTCCAACAGTTCTCGGTGAGAGATCAGCAAACCCTTCGCCTCTTACAACTGAAGAGGTCTATAAATAATGGCGGGAAGGATGCTACCACATGTGAAACGTCGCCTGCTAAGGAGCGCAAAATGCACATGTGTCTCCTGTGCCCGTACACAAATCAGCGGCAAGACGCTCTCACCAATCATTACAGGAGGCATGACGAATCAGATATTCTAAGCGCGGGTAATCATAAATGCTCCTACTGCGACTTAGTAGTTGTGCAGTCACATTTCTTGAGGGAACATTTGAAAACACATTTCAACTTCAACAAAACTCTCACTCCCGAATGTTTTGTTGCTAACGAAGACGTTAGTTTTACGATATCGAAATTAGATGAAGAATGTGAACCTACTGATCTCAAATTAGATATGAAGAAGAGTTTAACGTGCAATGATGAAAAAATATATGTTAAAATTAAGACAGGAGAACTTGTCGTGAAATAA
Protein Sequence: MLQQMSSSLSALVGEVTTIARPFEGRFSVDVSSEASSDAAEEYELPQCKIRRNYNCAKCTFYTQNPRAYLVHTRDVHFGRFKIYECQFCIYASRHQQKLLRHTKMVHGTTPPSPSSTVKLEMEVPAEGAAENVEDLMEEIEECDDSQIDVDEGRNNRADADADDSQIYAVRSSDAGLPKDKGRFFSCDKCNYVTHIKARYMKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGNGSFVCSKCTFTADIKQSLTVHEMNHHTPPVGQSSASRRRNRVGASDLTSADAATVFPKEEEGSGDSHSSHSHSHSVSDTMGLQDAERDIVSCNSDSNDVASSEVSPNREVQSAQDSHGNVSPQSGNEDKIQKQNRKAPRPIPQLIPLNTSTPNQNKTTGEPPAKKFKESTYSELACNFENLPDDITLIPVNNTPKETTLRKKNESFFDKLKMRLLTETGEEGSLKCKSCGFESKCLSEHSVHEKNCAAQAGRVMMNTSHSSMGSTRCQNCRHRCKSSADLYVHMLTCVKKENQNTTEPKRESNEASTSSYDKDAEPHPMENVVFVWNNINEGVKFERPLDININDDSTMPESQRNYDSEIVDENEGMNLSPNSLSLGKNVYKCPDCKFWAATASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPDHNDAKVLMTDETGRRNYSKYNKFLAVPVFNENGENEFHYIDQNTTVDASMDLDETLNDCNDVIHTSYEMQPLNLQTQPDATEFKYGHMEFATLEKKPKKTMWKCKKCNYKDCSKEALLEHVKQHQHSKVECTEESAPSGKKADAPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVVTTVKPKPDPAPATNTETYNDYCTKCPFKTNDKKLLIEHLQQHQPSSQSIFKCYFCPYFVRDEQDLIQHLLLHGITDPEDYISKAMGCRSPLPDSSALHDTLASAPGTTKRHKCHECPYETNSKSQFMYHEQFHRSTSAETPYKCPECNYSVSKRHLLHQHLRVHGIISKKNETEAELEASTSCHTKPDKSDSFSEDIPYVWVSARNEFHKMYKCRYCSYVNSHKCKIPNHEKLHCLGFENSEVIIYKCLECKMKYDNAGRLAEHSKKHGLLYGRIYSTVEEDIPDEDQIAKLRRVIELEKSTAGDDSTTEDNATNDSNEMKILYFCQKCPARYFTESELKAHETFHHFADANKCKHCEFSVREESDLVVHLSVHSDEHHIRTNMLKFIHISHSHYREPRLEANRNIDSSDVSWSVAVNLKNAENTEPQQRKHADSKNVPKQYYCKECPAKFFKTSALTYHAGLHGGEGEHKCKKCSYSVKNVGNLAKHEVLHENENKNANCDYESGDDMDYKNIPLSGTDLFQRKTEAQKRVLIDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERMKGSNGDPVKEEVKQEESADNITLAIKTMPKGTPKTDFQQFSVRDQQTLRLLQLKRSINNGGKDATTCETSPAKERKMHMCLLCPYTNQRQDALTNHYRRHDESDILSAGNHKCSYCDLVVVQSHFLREHLKTHFNFNKTLTPECFVANEDVSFTISKLDEECEPTDLKLDMKKSLTCNDEKIYVKIKTGELVVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01220230;
90% Identity: -
80% Identity: -