Basic Information

Insect: Chelonus insularis
Gene Symbol: -
Assembly: GCA_013357705.1
Location: NW:4502822-4507720[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0055 0.38 10.6 2.2 1 23 344 366 344 366 0.97

2 18 0.0082 0.56 10.0 0.7 2 23 401 422 400 422 0.97

3 18 0.013 0.91 9.3 1.5 3 23 517 537 515 537 0.93

4 18 6.1e-05 0.0042 16.7 1.1 1 23 585 607 585 607 0.99

5 18 0.00016 0.011 15.4 2.2 1 23 612 634 612 634 0.96

6 18 0.0048 0.33 10.7 0.2 1 21 640 660 640 664 0.92

7 18 0.0038 0.26 11.1 3.0 2 20 739 757 738 760 0.94

8 18 0.00013 0.0091 15.6 4.8 1 23 812 834 812 834 0.97

9 18 0.00018 0.012 15.2 0.7 1 20 839 858 839 860 0.94

10 18 0.031 2.1 8.2 0.6 2 23 871 892 871 892 0.97

11 18 1.8e-05 0.0013 18.3 0.6 2 23 931 952 930 952 0.97

12 18 1.7e-05 0.0011 18.5 1.6 1 23 957 979 957 979 0.95

13 18 0.0002 0.014 15.1 0.9 1 23 985 1007 985 1007 0.98

14 18 5.1e-06 0.00035 20.1 0.4 1 23 1024 1046 1024 1046 0.95

15 18 9.5e-07 6.4e-05 22.4 0.3 1 23 1052 1074 1052 1074 0.99

16 18 1.8e-05 0.0012 18.4 0.3 1 23 1080 1102 1080 1102 0.98

17 18 0.00036 0.025 14.3 6.2 1 23 1108 1130 1108 1130 0.96

18 18 0.0069 0.47 10.3 0.4 1 20 1136 1155 1136 1157 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0055	0.38	10.6	2.2	1	23	344	366	344	366	0.97
2	18	0.0082	0.56	10.0	0.7	2	23	401	422	400	422	0.97
3	18	0.013	0.91	9.3	1.5	3	23	517	537	515	537	0.93
4	18	6.1e-05	0.0042	16.7	1.1	1	23	585	607	585	607	0.99
5	18	0.00016	0.011	15.4	2.2	1	23	612	634	612	634	0.96
6	18	0.0048	0.33	10.7	0.2	1	21	640	660	640	664	0.92
7	18	0.0038	0.26	11.1	3.0	2	20	739	757	738	760	0.94
8	18	0.00013	0.0091	15.6	4.8	1	23	812	834	812	834	0.97
9	18	0.00018	0.012	15.2	0.7	1	20	839	858	839	860	0.94
10	18	0.031	2.1	8.2	0.6	2	23	871	892	871	892	0.97
11	18	1.8e-05	0.0013	18.3	0.6	2	23	931	952	930	952	0.97
12	18	1.7e-05	0.0011	18.5	1.6	1	23	957	979	957	979	0.95
13	18	0.0002	0.014	15.1	0.9	1	23	985	1007	985	1007	0.98
14	18	5.1e-06	0.00035	20.1	0.4	1	23	1024	1046	1024	1046	0.95
15	18	9.5e-07	6.4e-05	22.4	0.3	1	23	1052	1074	1052	1074	0.99
16	18	1.8e-05	0.0012	18.4	0.3	1	23	1080	1102	1080	1102	0.98
17	18	0.00036	0.025	14.3	6.2	1	23	1108	1130	1108	1130	0.96
18	18	0.0069	0.47	10.3	0.4	1	20	1136	1155	1136	1157	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTGGTTATTGATACTACAGAACCTCAACAAAATGATGAAGACGCTATGGAAGTTTGTCGTGTATGTTTGGTCGGCAATCACATAATGAGAGATCTCTTTGTAGAGAGCGACGTCATCTCATTATCAACTAAAGCCATGAGTTTTGCTAGTGTAAAGataCTACCCGGTGATGGCTTGCCACCTCATGTTTGCTGCGATTGTGCTGATAAACTTGAGGCTgcatatgaatttaaattacaagtTGAACAAGCTGATAGTTTGCTTAGAGAAAAATATGACAACTTTAACATCAAAGAAGAactcatttttaatgaagtgGAAGTACGTCCGGAAGATGAAAGACATGAAGAAGTTACTGAAAGTCATCATGTTGATGCACATTATGAAATAGCGACTGACAATTTAAATTCTGATATAACTGCTGTGAAACCCACATTATTAAAAGATCATTTGGCTTTACTAGAGGTACAAAAACTTTCTCACCAAAATGATTTTGCCATACAGCATAATCATATTGTTCAAAATCCTAATCATATAGAAACAGAAGAACAATATATTGTTCAACAAGACAATCAGAGTACCTGTCagataatgaatgaaaatataaattcaacaaatgatgaaaatcaCGACAAATCTGAAGTCATACATGAAGAATCTGAAGGAATAACGATTGAAGAACACAATTATATGGTCCAACAAGGTTATAGTTTATCAAGTGAACAAGAACacgaattaataaatcaacaagTTGATGATCATGACACCACAgaatatttaactataatagGAGAAGATGAAAGATCTGTGAAAGAAACAGAAGgtcatttgaataatatgGATAGTGAAATGACTGAAGTATATGTTCaagaaaaatgtgaaaataataCACAGAGTATTGgagaaaataaacataaaataattcagaatGATGGATCTAatgaggaaaattattttggaaatcTTAATTTAAGTAGTCGATTATCACATGGTCAAGAAAATAAGGAAGATAAAGTGTTTTTTATGTGTTACTTGTGCGATAGacaatttatatcaaaagatatattaaaaGAACATATGCATTCTCATGAAGAAGTAAGACAAGCATTAAGTTTGAAAAAGACACCAGAAAAATCGGTGAAAAATTTGTCGCCCATTAAAGGACAACCTCCATCTGGAAAAAAAGCTAATAAGTGTCCTTATTGTGGCAAAGAATATTTGTAtgtaatttcattcaaaaagcACATTAAACAGCATCAAAATATGATGCAGTTaccaaatgaaaatgaattgaaagatTTTGTAGATTCAATACTACAAGATGACAATTCATTTGATTCAAATAACTTTGATAACAATGATACTTTCGAAATTATTCCTCATGAAAAGAGTGATTCTGAGAATCAAAATAGTCACAATATGAAAGAAATGCAGGACCATGATTCAAGTCATAAATCGaatcaaattgaaatttattttgatggtACTGGTGATCAGGTAGTATGTAAAAATGAAGagaagttattaataaaacatttatgtaatatttgtaatcaagaatttgatgattttgaaaaactgAAAGATCACCGTACCGCTCATATACTTGAAGGTACTGCGAGTGAAGAAGATTTTAAAGATggtttagaaaatatttgtaataaagaaTTCAGGGCAGATAAAAAACCAACAGTGAATAAAGATAGTAAACCTTCaatggaaattaaaaaagaatctaCTGACTTCAAGTGTcctaattgtaatttattgtttgGCAGTAAAAGATCCTTAACGAAACATTTGGAAACTCATGAAGCTGTTCGATATCGCTGTAAAATTTGTGGGGATGAATTTACTCATAAAGAATATCTTCGTAAACATGCTGAACAGCACACTCgagtaaaatcatttaaatgtacTGAATGTAGTATAATTTTTGCTAATGAATTGACTTtaagaaatcatttaataGCAACGAATCATAAGACTACTATTAAAGGAGAGGAATATGATCCAAACAAAAGAATCAAAAGAGTAGCAGCTAAGGCAGCACAAAAgatcattgataaaataagcACGGAAGTCGGTTTGGAAGATTCTGaaaaagatgatgataatgatgaatttatgGTTAAGATTGAATCTGTAGGTACAAAAGCTGGAGAGAAATCTCCAGCAAAGAAAGtgactaataaaaaaaatctggaaTGTGAAACTTGTGGTAAGAAATGTATTTCTAAACAAGCTTTAGCTAAACACATGGATTGTCATGTAAAGAACGAAAAACCTGAAAAGGctgataaattacaaaataaaatggatCCTAAAGAAtcgtcaaaaaatatttttggtgatGATAGAGACGATgacgacgatgatgatgatgatgacttTGATGGTGGATTAGATTGGCCTATGGACAATCATGAATGTTCAACATGCAAAAAAAGATACAGTACCAAAAAATCTTTACTTCGGCATCAACTTCTTCATGAAGAACCAAACTTTGAATGTGATATTTGTAATGTGAAATTTTACAGAAAAGATAAGTTAAAGGCACATTATGATAAATGTTCTGAAAAAAATCCTAATCAAGTAAGAAAGTGTAATATTTGTGGAGATACATTTGAGAACAATGAAATCTTACGTGAACATAGGTCTAAACATGTTGATGAAGGTATTTTAACCGAAGAAGATCTACGAGAGTTAGAGCCAGGTTCTGAAGATAGAAAACCAGGGGAAAAAGTTCCAAGAAAGCGAAGAACTGACATTGTTGGATTGGAATGTACTGAATGTAATAAACAGTACACATCACGAAAAGGTCTTTTAAGACACATTCAAGTTCATGaaggtaaaaaatatctctgCGATATATGTCCCAAAAAATTCTATCGTCGTGAACATTTAAAGATTCATGTTGCAAAACACAACATGGTAAAGCCTTATAAATGTAGTCGTTGTTCTAAACGCTTTATCAAAGAGGAACAACTAGCTGCGCATGTAACAAAGCATGAGAgaaatttcaagaaaaataaggATTCTGATAGCACTGCTAAAAGATTCCTTTGTGAAATTTGTTCAAAGAGTTTTACACAGTCAACTACTTTAGTTGCCCATTTAAGAGCTCATAATGGTATCAAGCCGTATGTTTGTGAAGTTTGTGCTAGACCTTTCACAACTAATGCTTATTTGAAGATGCATATGCGAACACACACTCAAGAAAGACCTTATAGCTGTCAATATTGCTCGAGAGCTTTTGCTCGAGCTGATACCTTGGCTAACCACTTGACCTCACATACAGGTGAAGCCAAATATCACTGCAAATATTGTCCAAAGCATTTCCGAAGACTTAAATCCTTGAAAGAGCATGTATTCATCCATACAGGACAACGACCTTATGCTTGCCCCACTTGTGATAGAAGATTCAATAATAATGGGAGTCGTTATGCTCATAGTAAGAGATGCAAACAAAACATGCTCCAGAATCAAGCGAGACAAAACCAGATTCAAACTCAAACTCAAGCCGTTGCTCCATCTCCGAGCCCCGTTCAGCCAACAATTCGCCTTGCGCAACCAGTAGGACCAACAATGCAAGTAGTTCAATCGAAGAATATTAAGACTATTACGATTACGAGACAACAAGATCAAGTTGGTACACACCAGATCATGCAGCATCAAGAAATACTTATGCCTCTTATCTTACCTCTAACTGTTACTTTGactgatgttgatgatgaagtTATTCTTCCTGAAGGAACGAAAATATTCACCACCACGTAG
Protein Sequence: MDAVVIDTTEPQQNDEDAMEVCRVCLVGNHIMRDLFVESDVISLSTKAMSFASVKILPGDGLPPHVCCDCADKLEAAYEFKLQVEQADSLLREKYDNFNIKEELIFNEVEVRPEDERHEEVTESHHVDAHYEIATDNLNSDITAVKPTLLKDHLALLEVQKLSHQNDFAIQHNHIVQNPNHIETEEQYIVQQDNQSTCQIMNENINSTNDENHDKSEVIHEESEGITIEEHNYMVQQGYSLSSEQEHELINQQVDDHDTTEYLTIIGEDERSVKETEGHLNNMDSEMTEVYVQEKCENNTQSIGENKHKIIQNDGSNEENYFGNLNLSSRLSHGQENKEDKVFFMCYLCDRQFISKDILKEHMHSHEEVRQALSLKKTPEKSVKNLSPIKGQPPSGKKANKCPYCGKEYLYVISFKKHIKQHQNMMQLPNENELKDFVDSILQDDNSFDSNNFDNNDTFEIIPHEKSDSENQNSHNMKEMQDHDSSHKSNQIEIYFDGTGDQVVCKNEEKLLIKHLCNICNQEFDDFEKLKDHRTAHILEGTASEEDFKDGLENICNKEFRADKKPTVNKDSKPSMEIKKESTDFKCPNCNLLFGSKRSLTKHLETHEAVRYRCKICGDEFTHKEYLRKHAEQHTRVKSFKCTECSIIFANELTLRNHLIATNHKTTIKGEEYDPNKRIKRVAAKAAQKIIDKISTEVGLEDSEKDDDNDEFMVKIESVGTKAGEKSPAKKVTNKKNLECETCGKKCISKQALAKHMDCHVKNEKPEKADKLQNKMDPKESSKNIFGDDRDDDDDDDDDDFDGGLDWPMDNHECSTCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPNQVRKCNICGDTFENNEILREHRSKHVDEGILTEEDLRELEPGSEDRKPGEKVPRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMVKPYKCSRCSKRFIKEEQLAAHVTKHERNFKKNKDSDSTAKRFLCEICSKSFTQSTTLVAHLRAHNGIKPYVCEVCARPFTTNAYLKMHMRTHTQERPYSCQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKHFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNMLQNQARQNQIQTQTQAVAPSPSPVQPTIRLAQPVGPTMQVVQSKNIKTITITRQQDQVGTHQIMQHQEILMPLILPLTVTLTDVDDEVILPEGTKIFTTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00316955;
90% Identity: iTF_00316955;
80% Identity: -