Basic Information

Insect: Chelonus formosanus
Gene Symbol: Hr39
Assembly: GCA_028641665.1
Location: CM054004.1:22275910-22278920[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.057 6.4e+02 -0.2 5.8 132 162 28 58 14 130 0.63

2 5 0.61 6.9e+03 -3.6 8.4 47 163 236 351 230 370 0.63

3 5 2 2.2e+04 -8.5 11.1 73 160 374 470 358 489 0.42

4 5 3.5e-08 0.00039 20.3 0.0 1 21 553 573 553 577 0.92

5 5 2.6e-71 2.9e-67 228.2 0.1 170 408 676 909 592 909 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.057	6.4e+02	-0.2	5.8	132	162	28	58	14	130	0.63
2	5	0.61	6.9e+03	-3.6	8.4	47	163	236	351	230	370	0.63
3	5	2	2.2e+04	-8.5	11.1	73	160	374	470	358	489	0.42
4	5	3.5e-08	0.00039	20.3	0.0	1	21	553	573	553	577	0.92
5	5	2.6e-71	2.9e-67	228.2	0.1	170	408	676	909	592	909	0.82

Sequence Information

Coding Sequence: ATGTCGGAGCAAAACGGGCCCACAGAGGGCCCGGGCTGGTGGCCATCAGCACAATCATGGAAGTTATCTTCAAGTTCCTCATCCACCACCACTATTACTACCACTACTTCTACTACTACCACTACCACTACTACCACTACTTCAACTACTTCTTCTactaccaccaccaccaccaataataataataataataataataataataataataataataacaacaataacaatataaataataataataatacatcatCTTCACGCACTATTGATCCAGGGAAAAATGTATCTGTAACGACAATAAATGTACCACCAATACAGGAAATACATgatggtaaaagtgtaaaatatttaacggGACAAAATGGTATAACAGTATCAGTGGTATCATCATGTGGAAATAGTCCAAGTCCAATGACAGTTCCAGAATATAATTCTATAGATAATCTTGAAGATAGTGATGGAGAAATTAGCAAAATTGATTTTAGAGGAGTTAATTTAAGAACTAAAAAGAAACGTGATGGAGAAACAGATTGTACAATTGTTGAAGATTTACATCATCAGCAACCAGAACGTCCAATGTCTTGGGAGGGTGAACTTTCAGATCAAGAAATGTCTTCCAATACATTAACCAATCAAGATCATGAAGAAACGTCAATGGAGGGTGTACAAGTATGTAGTACAAGTCCTGGTATTCAAGAGCAAAAGTTTCCTATTAAACCCGAACCAGATTTTAGATCAAGTCCAGGATTAACCATTGGATCTCATACCGATACCGTAATGCCTCTTCATTCCCAGCAGCTCCATCATCAACAGCAACATCATCCTCAACAGCGTGAACTTGAACAGAATCAACAAAGCGACCTTCCGCTTTTAGTGGGAAAATTGCTTGGTGGATATAATAGTTCTACTCCAAACCATAGCCCTGTTCTTAATCCCCGTCATCACTTGACAAAACACAGTCATACTAGATCACAAGTTCCGTCCCCTGACTCTGCAATTCATTCGGCGTATAGTGTTTTTAGTTCGCCGACTCAAAGTCCACACGCAGCTCGGCATTCAGCTTTAGGTGCTGGTAGTCCAGTTCCTTCATCTTCACTCTCGTTATCTCGACATAGTTTTAACAATTCAACATCGTCACTGTCTTTATCACTGTCACACTCATTGTCACGCAATAACTCTGATGCCTCGAGTAGTTGTTACAGCTATGGTTCTTTGAGTCCGCCTACTCATTCACCCGTCCAACAGCCAAGGCACGCccatcatcaacatcatcacCAAGTACCACAGAGTAGTCCTTTACACCTGCCAGTAACGTCAGCCACTAACGCCCACCACTACAATGTTCCTGAGCTAAACTCTGATCCACATTCAGAAGATCAAGAAGACTGTAAGATTCCATCAACACCCTCAGGAATATCAACAAGACAGCAGCTTATTAACAGTCCTTGTCCAATATGTGGTGATAAAATAAGTGGTTTTCACTATGGAATCTTTTCTTGTGAATCTTGCAAAGGATTTTTTAAACGTACTGTACAAAACAGAAAGAATTATGTGTGTTTAAGAGGCGCAGGATGTCCTGTAACTGTAGCAACCCGGAAGAAATGTCCCGCATGCCGCTTTGATAAATGTCTGAACATGGGAATGAAGTTAGAAGCAATAAGAGAAGATCGAACAAGAGGGGGTAGAAGTACATATCAATGTACATACACATTGCCGACAAATCTTATAGGAAGCCCAGCAGGTGGGATGCCTGGAGAGAAAATAACTGGAGGTACATGTAGTCCGGCACCACCAGGTGCTGAACACCATCATTCTAACCGTCATCATTGGAATCATTCTCATAAAATTCAAGTAGTACCACAACTACTTCAAGATATAATGGATGTTGAACATCTTTGGCATTATAATGACAATGATCGAGTAAGTCAAACCAGTGGAAATGGATCTAGTGTTGATTCGTGTTTAAGTGCTGGTGAAAGAAATACTAATGGAAACATTGAAACAAGAAGAGATTCATCAAGACCTAACTCCACCGGTTCAATATCTCAAACTAATCATAATCAACATTCATCATTAAGTACAGCACTTGTTAATGATTTAAGTGAAAATCCCAATGGAAATTCATCACAACATCCCGATTTCCTTTCGAATTTGTGCAATATCGCCGATCACAGACtgtataaaatagtaaaatggTGTAAGAGTCTTCcactctttaaaaatatttcaatcgaTGATCAAATTTGTTTACTCATCAACTCATGGTGTGAATTACTTCTTTTCTCTTGTTGTTTTCGTAGTATGAGTACTCCTGGAGAAATTAGAGTATCTCTTGGTAAATCAATAACTCTAGAACAAGCTCGACAACTTGGATTGGCAACGTGTATTGAAAGAATGCTTGCATTTACAAATAATCTTCGACGACTTCGTGTCGATCAGTATGAATATGTTGCAATGAAAGTAATAGTATTGCTGACATCAGATACCAGTGAATTAAAAGAACCAGAAAAAGTTCGCGCTTCACAAGAAAAAGCACTTCAAGCATTGCAGCAATATACGATTGCCAGGTATCCAGAGATGCCTGCCAAATTTGGTGAACTTTTACTACGAATACCAGATCTTCAGAGAACATGTCAAGTAGGCAAAGAATTGCTAAGTCAAAAACGTGCTGAAGGAGAGGGCAGCTCTTTTAATCTCCTTATGGAACTTTTACGTGGAGATCATTga
Protein Sequence: MSEQNGPTEGPGWWPSAQSWKLSSSSSSTTTITTTTSTTTTTTTTTTSTTSSTTTTTTNNNNNNNNNNNNNNNNNNNINNNNNTSSSRTIDPGKNVSVTTINVPPIQEIHDGKSVKYLTGQNGITVSVVSSCGNSPSPMTVPEYNSIDNLEDSDGEISKIDFRGVNLRTKKKRDGETDCTIVEDLHHQQPERPMSWEGELSDQEMSSNTLTNQDHEETSMEGVQVCSTSPGIQEQKFPIKPEPDFRSSPGLTIGSHTDTVMPLHSQQLHHQQQHHPQQRELEQNQQSDLPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHAHHQHHHQVPQSSPLHLPVTSATNAHHYNVPELNSDPHSEDQEDCKIPSTPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPTNLIGSPAGGMPGEKITGGTCSPAPPGAEHHHSNRHHWNHSHKIQVVPQLLQDIMDVEHLWHYNDNDRVSQTSGNGSSVDSCLSAGERNTNGNIETRRDSSRPNSTGSISQTNHNQHSSLSTALVNDLSENPNGNSSQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQVGKELLSQKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00316870;
90% Identity: iTF_00316870;
80% Identity: iTF_00316870;