Cver000142.1
Basic Information
- Insect
- Cheilosia vernalis
- Gene Symbol
- Rel
- Assembly
- GCA_949126925.1
- Location
- OX421358.1:1316989-1319755[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.4e-47 4.3e-43 148.0 0.9 2 168 39 222 38 223 0.93 2 2 0.58 4.6e+03 -1.8 0.0 136 159 491 513 454 518 0.72
Sequence Information
- Coding Sequence
- ATGAAAAACAACGATGGATTGAACAAGTTGCAGAAACTAAGCTTTTCCGAATCAAACGCTAATGAAACGTCTTCGAAAAACAACCCGAAGGAAATCTCCTACAAAAGCAAATTGTTCATACTGGAACAACCCACAGAAAAATTTCGTTTTCGTTACAAGTCGGAAATGCACGGGACCCATGGTTCACTTAATGGTGAGCGATCGGAACGATCGAAAAAAACCTTTCCCGAAGTAGAGCTGAGGAATTTTAACAGTGCTGGAGTTATACGATGTAGCTTGTACCAACCAAATATTGATAAACCGTCGCTGCACTCCCACCAGCTGGTTGTCCACAAGGACAATATGGACGTTTGTGATCCACACGATGTCTATGTTTCCCCAGACAAGGGTTATATAGCTCGATTTGAAAACATGGGCATTATACACACTGCCAAAAAGGACATTGCAATGGAGCTgtttaaaaagaagaaagagaaaTTAAAGTTTCAACTACGATGCAAGGAGCTGTCACAAAAGCAGGAGAGCGCTTTGCGAGATGAAGTTCAACGGGAAGCCAAATCCATGAGCGTGAACCAAGTTCGCCTTTGTTTTGAAGCATTTGAAATCGTCGAAGGAGGACAATGGAAACAAATTTGTGAACCTGTTTTCTCTCGCCCTATCAACAACCGCAAAAGTGCGTTAACAGGCGAACTAAAGATTTGCCGCCTAAGTATTATTGCCGGTAGTGTCGCCGGTGGAGATGATTTAATACTTTTAGTTGAAAAagtcaacaaaaacaacataaaagtGCGCTTCTTTGAAATCGTTGACGATACCGAAGTGTGGGAAGCGTTTGCCCATTTTACCGAAGCCGACGTCCACCATCAGTATGCTATTGTCGTGCGCACTCCAGCATATAGAAATAAAGACGTCGATAGTCATGTAAATGTGTTCATTGAATTGGTACGCGAAAATGACAATGAACGCAGTTCTCCTGTCATATTTCGGTACAAACCGCGAGACATTATTCTATCGCGTAAGCGCAGACGAGCGTCGAATTCCTCTTCGTTTACTAAAAGCCCACTGAGTAGATCATACGAACTGCCAGAATCCGTTGTGGCCAAAGGCATGTCTATGCACACACAGACAATAAAAGATGACCCACAAACTAAAGAAGAATTAAAAGCAGAAGCCGGACTTTATTCCACTGTTCCAAACGAGTATACCTGTGAGTTCAGTACTTTCATTCGACAAGTTAACAGTGACTCGGACGAATTAGAAAGTATGATATTAGACCCTGATTTTGGcatgtttaaatatttgggaCTAGAAACTGATGGCGAAGCAGCCGTACGCACGAGGCAACAAAGAAATCTGCCAAAACTGTGTACAAATACAGTTCAGGATATAAAGACCCATCCATATCATGTCACATTGAAAAATATAGTTTCCACGTTCAATAATAGCTCCAAACTCGGACTGGAGCCGGTCGTGAAtaaagttaaattaattttcgaaGACTTTGTTACTACTAATGACAACGGAGACACTATCGTGCACGAAATAATTAGACAGGGCAGGCAGGACGATGcaataacaattttcaaaatactGGCCAAGCTAAATCTTACGAACTTATTATCCCAAGCAAATAATCGCCGCCAGACTCCGTTGCACGTGGCTTGTTTATTCGATCAGGCTACATTCATAAGACCTTTACTGGGACTTAATTGCGATCCGAACGTTCAAGACACGCACGGCAATACAGCACTGCATATTGCTATTGCTGAAAACTTAACACAGTGCATGGAGAAGTTTGTCCCTCATATGTCATCCAGCGACTTTAATGTTAACCTAACAAATGACGATGGCCGAACACCTCTGGATTTGGCCATTCGTAAGAACAACTCTGCCTTTGTGAAGGTGTTATTATTGAAATGCAACGCCTCAGCTAAAATTTCCAATTCCCGGGACGGCAATAATGCCCTTCATTTAGCTGTGCAGGAACGAAACACAGAGATCGTTCAGATTGTTTTAGAAAATAGCAAAGTAAATATAAATGCGACCAATCGAGCCGGCCACACAGCTATCGAGCTGGCAAACACTCTAAGGGGGTCAGTAAGAACAGAAATTCTCAACATACTACAATCTTTTTTGCCGCCTTCAAGTTGTTCGCCactacaaattataaaaaaagaaccaGACTTCGAGGACAGCAGTTCAACgggagatgatgatgataaatCATCACAATCAAGCATTGAAGTCAAACAGGAATATGATGTGCATATAAAGGAGCTGCTAAAAGATAAACAAGTCTATAGGCGACTTGCCAAAATGCTCAACGTCGATGAGAAGTGGAGAAAACTTGCCACTCTACTAAAACTAGATCATTTACTATTGATGTGGTCAAATGCTGAAGCTATGCTTAGATGTATAGTTGAGGTGGACGGAATAAATGGTTTGCACCTGTTGAATGCTCTTGAGGAAGTGGACAAAGAGGCTGCTGGCATGGTGACGGCGCTATTGAACCCAAGATAA
- Protein Sequence
- MKNNDGLNKLQKLSFSESNANETSSKNNPKEISYKSKLFILEQPTEKFRFRYKSEMHGTHGSLNGERSERSKKTFPEVELRNFNSAGVIRCSLYQPNIDKPSLHSHQLVVHKDNMDVCDPHDVYVSPDKGYIARFENMGIIHTAKKDIAMELFKKKKEKLKFQLRCKELSQKQESALRDEVQREAKSMSVNQVRLCFEAFEIVEGGQWKQICEPVFSRPINNRKSALTGELKICRLSIIAGSVAGGDDLILLVEKVNKNNIKVRFFEIVDDTEVWEAFAHFTEADVHHQYAIVVRTPAYRNKDVDSHVNVFIELVRENDNERSSPVIFRYKPRDIILSRKRRRASNSSSFTKSPLSRSYELPESVVAKGMSMHTQTIKDDPQTKEELKAEAGLYSTVPNEYTCEFSTFIRQVNSDSDELESMILDPDFGMFKYLGLETDGEAAVRTRQQRNLPKLCTNTVQDIKTHPYHVTLKNIVSTFNNSSKLGLEPVVNKVKLIFEDFVTTNDNGDTIVHEIIRQGRQDDAITIFKILAKLNLTNLLSQANNRRQTPLHVACLFDQATFIRPLLGLNCDPNVQDTHGNTALHIAIAENLTQCMEKFVPHMSSSDFNVNLTNDDGRTPLDLAIRKNNSAFVKVLLLKCNASAKISNSRDGNNALHLAVQERNTEIVQIVLENSKVNINATNRAGHTAIELANTLRGSVRTEILNILQSFLPPSSCSPLQIIKKEPDFEDSSSTGDDDDKSSQSSIEVKQEYDVHIKELLKDKQVYRRLAKMLNVDEKWRKLATLLKLDHLLLMWSNAEAMLRCIVEVDGINGLHLLNALEEVDKEAAGMVTALLNPR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00314038; iTF_00314919; iTF_00311575;
- 90% Identity
- -
- 80% Identity
- -