Basic Information

Gene Symbol
Hivep1
Assembly
GCA_951230905.1
Location
OX579679.1:34795169-34816115[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.00047 0.066 14.5 2.1 1 23 408 430 408 430 0.97
2 8 0.0058 0.82 11.1 4.8 1 21 436 456 436 460 0.89
3 8 0.0069 0.98 10.8 0.5 1 19 1183 1201 1183 1207 0.94
4 8 1.2e-05 0.0016 19.6 1.8 1 23 1916 1938 1916 1938 0.98
5 8 1.1e-05 0.0016 19.6 5.5 1 22 1944 1965 1944 1968 0.91
6 8 0.00023 0.033 15.5 2.0 2 23 2414 2435 2414 2435 0.97
7 8 0.0044 0.62 11.4 0.8 1 23 2441 2465 2441 2465 0.91
8 8 0.0024 0.34 12.3 2.7 1 23 2486 2510 2486 2510 0.92

Sequence Information

Coding Sequence
ATGTACGACTATCGCGACTATCGGCAGCGACACTCGCCTCGCCGTATCAGCGATGATCCGGGCGGCAGAAAAGCAAACAACATGGATGACACCAAGCAATTGAGCACATCCAAAAAGCAACAATCACAAACACACTACAAGACCCCCATCGGTTCGAACAACCATTTGAACAGCAGTGATACAACTAGTAACAATAAGAAACACCACAATAATCAGCAAAAGCatagacaacaacaacaacaacaatccgCTGGTGGAGGAACAACATCACCATCGACCACGACGACGAGCAATGGTGAAAAACAATCAGGCAGCAGCACAACAGCCGTAACTTTAAAGTCATCTTCTTCATCGGTAGCATCAGcaccaacaaaaacaacaaaaacaacaaaaacaacaacaacatcaacaactacCCACCGTTCCGAAAAGAAGTCCACCGTCGCCGATAATCATACCCCAAACGCCAAAATGACGCTTAGCGATACAAATAAGCTAACGTCGGATCTTAtcagcagcagtagcagtagcACCAATAGTGATAATAGTAGTTTAAGTAGCAacattaacaacaacaataacattaATCACAATaacaaccacaacaacaacaacaacaacaacaacaatatcaaTAGCAACAAGAGCTTAATGAGTGAATCATCGTCGATATCCACAACACCATGGAACAACCCCAAGTACCTGCATAAGAAATTTAAGCGCATGGCCAGCACAACAACTACCACCAGTGCTAACCCATTGGAGCATAATGAAGCTATCGAGAAGGGAGGATCATCATCGATAtcctcgtcgtcatcgtcgtcgtcgccaaCATTAACGTCACCGATATCCGAATCACCACCAATGGCTGTGGTGCTAAATGGTAATTGTGCCGCCGAAGAACGCGTGCCACCGCTGACAAATGGTCATTCGCCAGCTTTAGCGGTGGCATACACAGCCAGCGGTAGTGCCAATGACagcaagaagaaaacaaacaacaacaacagtagtAGTAATCTAAGCAACAACAGTGATCTAGCCATAAGTAGTAACAGTAGTAACAATAGTAATAGTGTTGGACAAGTCCAGAGGACAGCGTCTAGTATTAGCGTAGTGTCAATGCAAAAATTGGCGCAACAATCAaacacacaacaacaacaacaacaagcgaAGCACTCCGCCGGCGGTAGTACTGATCCACTTGGACAGCAGCTATCGCGGCATGTTTGTCCGTATTGTAATTTAAATTGTACAAAGCCATCGGTACTACAAAAACATATCCGTGCACACACAAACGAACGACCATATCCCTGTGATACATGCGGTTTTGCATTTAAGACAAAGAGCAACTACTACAAGCATTGCAGATCGAGATCGCATGCGTTGAGAACTGGAGGCATCGAACCACCCACCGACGCCGATGAAGGCTCAATGGGTGCTTCAGATCAGGAACAGGATCCCGATATGAGCAATAGCAGCTCCGATGTGTTAAGCCGGACAACGTCTCCTCTCGATGAAAGGACCTCCTCGCCTGCTGTCCTTCCTGGTCAACTGTCGTCATCGACATCGAGTCCAGATTCGAAGAGCTTCCTTCAGCCATATCAATTGGCGTCACCCAATCAACCTCAGCAACAGTCAGCAGCTACAACCACCGCCAGCAGTCCAAAACAACAAAGTTATTCCAATGACAAGCCCTACAAACCAAAGTTTCACAACGCTGCGCTCTATGCTGCCAATAAactgcaacagcaacagcagcaactgcaacaacaacaagagcaACAtttgcagcaacaacaacttcAAGAAGAAGCAATCACCAAGCACCAACAACAGCTTCAACAGCAACACCAGCAAGAGCAACGGCAACAGCAccacctacaacaacaacaacaacaacaacaacaacagcaacagcaacaacagcaacaacaacaacaacatcataTTCACCATCCTAACGCTCTGCAGCTCCCCCAATCAGTGTCGCTGCAGCACGTTAACAACTCCATAAAAGTATCCAGCCATCACCTGAACAACACTCATCAGTTGATACCAATGCAAGGACCACTGCCTCTTCCGCCACATGCCTCACCAACCGGCGGATACTATGTCAATCCAGGACTACCTCCCCATGCCCAATACTATAGTCCGCAAGCACCGTACATCCTTGCATCATCGGGTTCGCAGCGAGACATTTTGTCACTATCGGCACactaccaacagcagcagcagcagcatcaccaccaacagcaacagcaacagtatCAGTTGCAACATTCCACCGTGATGGCTTCTCCGATGCAGTCTACCGCTATGCCTAACAAAGCCCCAACCCACCGTAGTTATCAACATCAATCGGCGGCACAAAGTCTATCCACAGGGGGTGGAAATAATGTTGGTGGTATGGCGGCGCTATCGCCACATGTGCAACAGGTGGCCAGCAGCAGTAGTAGTGGCAAAGAGTCATTAACAACGTCGGCATCATCCGCAACTGCAGGCAACAACAGTGCTGTAGCTGGTAGTTGTGGTGGTACAATTTTGGGCAACATATCCGCTATAACTGCGACACCAGGCGGGGGACACCAAGTGAATGTGGAACTTGTGCAGGAGCACATTTCCAAGTTGATATCGCAGAACGAGGCCATCGTGGAGAATAAGGAACTGCTCTTGCAGAAGAAATATCCTAAGACTCTTAACCGGTCTAGAAGCTTTACGAACGCTAATAATTCAGCAGCGATGTCAAATAACAACAGCAGTAGTCTAGTCCCAGCGTCTGGAATGCCTAGTGGCGAAAGTGCTAGCACTAAGCTGGCTCAAGTCATCGCTCACAAACAGCaactgcaacaacaacagcaacagcaacagcaacagcaacagcaacagcaacagcaacagcaacagcaacagcaacagcaattgcagcagcaacaacaacaacaacaacaacaacaacaacaacaacttcagctacaacaacaactacaacaacaacaaatacaacAGCAACAATACCTAAGAGGCTTCACCGAAGACCACATCCAGAGGCTAGCGGCGAACTCATACAACAACCCGATAAATGGCATGTCCAAGAACCTAAACAAACTGGCTGCCGTGAGTATTATGATTCCTTCTATGGTTCAGCAGCCACAACCCCAGCAGCGAGTGCCTCATGTTCCTATACAAACCCCGGTACCTACACCAACGCCATCGCCTTCACAAATGACCAGCGCCTCACCAATCCCGAAAGAAAGTGCGCAGCCATCGTCAGTCAATGTTCCACTTAACCTATCCAAGGCAGTTGATTCGAATTCAAATGCCGCCGTTAGTGAGGCGCCCAGCACCAGTGGACTCTCAAGGAAGCGACTCTCCATTGAATCGCAGTCCTCACCAGCACCACCCGCTGACAACATAGTCACTAGTAGTACGAGCAGCGGCAAAAGCCCCGCGATGCACCCTCAAAACCCAAGTTACTCTATCATTAAGAATCTTCTCTTGAACGCCAGAGGCTTAGCCGTGCCAACTGGTGAAGGCGACGACGCGGTCTACATTTGCCCTTTGTGTACAATGGAGTTCCGTACCGCCGAAGATCTGCAGGTACACAATAGCGCCTACTGCCATGGTTCGCCATCCAGTGCTTCGATAAGTCCCTCCTCCTCGCCATCGTCCAAGTACTTCCGTTCGAATTCTCTAAGGCTGGCTGAACTGAACACCCCTAACACGCTGGCTAAACTGGCTTTGGTCAAGCTCGCCTGGTCACAGCTGAAGACGAAACCCAGTACTCTCGTGCTGAATCAGTTGAGCGGGACAAGCGGTGCGTCGTCGTCAGCGGCTCCCACACCGTCAACATCATCTGGCCTGGTCTCCATTCGCAGCTCTACGCCATCGTCATCGGTAACATCTTCATCAACGCCGTTGCCATTGCAGGAGGTCATCACGAGCAACCGATTTATCGACACCCCATTGCCGTCGCCAGGACCTTTATTAGGCAAGACCCCACTTGTTGAGGCGTACAATCACAACGAGCGCAAGTCGGAGGAGATTGTCATAAGGAAGGTACACGACGATCATCAATCGGCGTTTCGATCTACAACTGCAAACAAACGGCCGAAGTATGAACAGCCCGCGACCAGCTATCATCAAACGCATCCCCATCACACTTCGACGAAACCAAACAGCAACCATCAGGAGAAGGATGATCGCATTAAGCGGTTCGTATCCTCTGGCGGCTGTATGGTTCCAATCTCTGAGTGTTCTGACGTCGACATGAGTCCCAAGATGCTTCGAACTCCACTCTTGTCTGGGGGTAGCTTTCAAGAGGTTTCGCCAAAGCCAAAGGAGCCTCTTCAGGCATCGAACAGGCCACTGGGAACACCCAATATGATGATTCCTATCACACCACTTACCCCAAGCTTACCACCGGGCCTCCAGATGTCAGGGCcgaaacattttcagtttcctCCTATCAACCCCATCACCGCATTCAATCCGTTGACGCTGCCGATTCTCCAACAGAGCGGCGGAGAGAAGGTTATTCCCTATGTGCCGGGCATTCCCGGCCCGAATAGCCTGACTCCACAGTTGCCGCCACCACCACAGCAGCTGCAGGTTCCGACGCAGTCGCGTAATCTCAGCCCCAACAGACAGAAGATACCCAGTCCGGTGGTACTGCCTGGTATGATGGAGGGATCTGCTTATAGTCCGAAGCCAAAGTCGATGCTAATGGAAGTTGATGGCCGCAATTTGTCGCCCTTTGGAGGAGTGAATAATGTGCCAAGTGAATTCAATCGGGTTCCACCATCGCCTGCATTGAGAGCAGCACGAAAGTCCTCTCAAACACCAGTGAGCCTCGAAGTCCCAAAGAAATCCTTTAACTTTCTGCGCATGGCGGACAATGTGAGTCCGCGGAAAGTCAGCAAGGCTCCAGAAAACACTGAGAAGGAAGTTCGTTACTTTAATTTTGACCATCTGTCGAAGGAACCGGAACTTGTAACTCCCATCCGACCGCAGCAGGACCCTATGACACCGCTCCATGTTGAAGTATCGAATTCCTACCGTCGATGTGCTGACTCCAGTATCGACACAGTTGTTGAACCCGTGGACGAAAAGTCATCCCCGTCGAAGCGTACAAAGTTTCTACGCCCAACCAGCCTTCCCCTCAAGCCAGGTACGTTCACGCCTAAGCGTCATCATGGAATCACACCAACGGCCAATACACTGCCCCTGATTTCGCCAGAGACTCCGCGGccatcgaaagcctgtgtgcAGCTTTATCTAAACGGACATGCGTACACGTACCTCGGGCTAAAGTGCAGCACTAAAATGTTCTACTGCACTGTGAACTGCCCACAACCATCTTACGTAGCAAATCTACACAAGCTGTCGATGTACAGCGTTTGGCAGGTCTGCGCGGAAAACAACCCTCATCCTATGGGTTTTAAGCCGAAGACCGTGATGGCCCTATACGATGCTCGCCAAAAGTCGTGCGCTTTAACGATGGCCGGCCGAGTAACGGTCTGTTCCACTGTGCACTCGCAGCATTCGGTGATGACACCGTTTGAGGATAACATGGGACAGTTCTACCATCATCAGTTAAAGGCTCTACCAGCTCCAGCCTTGGAGGAGACGTCAAGCAAATCCGACTCCGCGGCTGACAAGGATTCAGCAAATAGTCAGCAGCTGTTGGTTGGTGGCTACGAGTCAAATGAGAACTACACGTACATCAGGGGGCGTGGAAGAGGGCGTTTTGTATGCTTAGAATGCGGTATCCGTTGCAAGAAGCCATCGATGCTAAAGAAGCACATACGGACGCACACTGACGTACGTCCGTACACCTGCAAGCACTGCAACTTTAGTTTCAAGACAAAGGGAAACCTCACAAAGCACATGTCGTCGAAGACGCATTTCAAGAAATGCCATGAGCTTGGCATCAATCCGGGCCCAATGCCAGCTGATGGTGAATTCACCGAACCTGACTTTGAGTACGATCAGCAGTCTATCACTTCGGGTGGCGGGCGAACGTCTTCACTACCGGGTGAATCAGATTCGGATGATTTCACTGACAACGAGACGGAAAGCAGCGATACCGATGAATCGAAGTCGCGCCTTCAGGAACACGAGGCGGCCCGTTCCCTTTTGTCCCTCTCAATGACACCACCGATAGTCAGTAGTGTATCTCCAAAGGACTCCTACACATATCAGCAAACGGAGCTCACTACGccgcaacaacagcagcaggtgCTCCGCCGCGTTGTGTCGTTTACATCGCCGAAACCCCCATTTGACTACCAAAAGCAGGAGCAGTACTACTCCAATCCAGAAGAATCCAAGCCGAAGTTGCCGCGTAGTTTTGATGAATCAACCATGCTACCAATTGACCTGACCAAACCTCGTTCCCATGAGCCACTGAAACCGTTGCCCCTTCATCAAATGCAACATCAGTCGGCTGCGCAAATTCGTGATGTTATTGGATCGGTCAGCAATGAGTCAATGTTCATGAAATCTCTGATCAAAGTGACAGATAGAGTTCGCACAGCTACCGAGTGCTCGCCGTCCAGGCTAGACGGTGCCTTGCATCATGCATATCTCACCGAACAAGCGTTGCACTACACAAAGATCAAGCAGAGTCAGATGAGCAGGAGTTCCATTGAAGCTGCATCCGGATCGAGCAGCACTTATACCACCACCAATGCAATAGGAGGTGGTGGTAGCCTCTTGACAATGAGCTCAACCTCAGTTTCATCGACGGTGATGGTGAGTTCGAGTGTGATGAGCACAAATGTTATGAGCACTCCAACGTTTGTTGAGGATACACCGAATCCAAAACTAATTGAGCCGGCAAAACCTGACAATGAAGTGCCAGCTGTGACCGCTTCCACACTAGAAGCAGCACCAACGACAAAAGAATCAACAAAGTCATCGAAATCAAAAGCTCCAGGTAGTGCCAAGAGTGTCGCATCAGAGTATCTCAAGATGACCAGTCTCAAGTCGAAGACGTCTTCGTCGTCGAAGTCTTTGGCAAAACCTgaagaaagtggcgatgaaagcATGTCTGACCATGAAGTCGCCACCGCTACAGACCCAATAGCTACACCTCCAACATCCCAGTCATCGACAGCGCCAGATTTTGCTGGCGTTCTTGCCCGTACTGTTATCGTCGGTGAGGACGGCCTTAAGAGTTCTTCAAATGAAATACAGCCCGCCTACCCACGAGTAGCGATCTCCAGCGACGGTCGTCCCGTATGTACCATCTGCTCGAAGACCTTCCAGAAGCAACATCAACTAGTACTCCACATGAACATTCACTATATGGAGCGCAAGTTCAAGTGCGAGCCGTGTGCAGTGAGTTTCCGCACTCAGGGTCACTTGCAAAAACACGAACGCTCCGAAGGACACCGCACAAAAATGATGATGACTTCCACCTTTGGTGTGCCAACGACATCCAATCCTCGTCCATTTGAGTGCACAGATTGTAAGATCGCTTTCCGAATCCACGGCCACCTAGCCAAACATCTGCGATCGAAGACGCACGTCCAGAAGTTGGAGTGCCTGGAGAAACTGCCTTTCGGCACATATGCTGAGATTGAACGGGCCGGCATCAGTCTTACCGAGATCGACACTAGCGACTGCGATAATTCGCTAAAAAGTCTAAAAGTTCTGGCCCAAAAGCTGATTGAGATCGACCCCAAGAAAATGGGCACATACACGACGCCGTCGGGAATGCCGGACGTTCCCAACTCCAACACAAACGGTGACAGTGGCAGTGAGGACGGGTATGATGCCCAGAATTCCACAGACGAAGGTGGTGCTAAGGGCGATGAAAATTCGACGCCGAACGCTGCCAGCCACAGTTTGAAGAGGCGAAACCGGCCCTTCAGCAGTAGTGACGAAGAGCAACAGCAGCAGGATAGTATTATCCCAGAAAAAAGGACCCGAACGCACAGCGAGATGTCGTCGAATTGA
Protein Sequence
MYDYRDYRQRHSPRRISDDPGGRKANNMDDTKQLSTSKKQQSQTHYKTPIGSNNHLNSSDTTSNNKKHHNNQQKHRQQQQQQSAGGGTTSPSTTTTSNGEKQSGSSTTAVTLKSSSSSVASAPTKTTKTTKTTTTSTTTHRSEKKSTVADNHTPNAKMTLSDTNKLTSDLISSSSSSTNSDNSSLSSNINNNNNINHNNNHNNNNNNNNNINSNKSLMSESSSISTTPWNNPKYLHKKFKRMASTTTTTSANPLEHNEAIEKGGSSSISSSSSSSSPTLTSPISESPPMAVVLNGNCAAEERVPPLTNGHSPALAVAYTASGSANDSKKKTNNNNSSSNLSNNSDLAISSNSSNNSNSVGQVQRTASSISVVSMQKLAQQSNTQQQQQQAKHSAGGSTDPLGQQLSRHVCPYCNLNCTKPSVLQKHIRAHTNERPYPCDTCGFAFKTKSNYYKHCRSRSHALRTGGIEPPTDADEGSMGASDQEQDPDMSNSSSDVLSRTTSPLDERTSSPAVLPGQLSSSTSSPDSKSFLQPYQLASPNQPQQQSAATTTASSPKQQSYSNDKPYKPKFHNAALYAANKLQQQQQQLQQQQEQHLQQQQLQEEAITKHQQQLQQQHQQEQRQQHHLQQQQQQQQQQQQQQQQQQQQHHIHHPNALQLPQSVSLQHVNNSIKVSSHHLNNTHQLIPMQGPLPLPPHASPTGGYYVNPGLPPHAQYYSPQAPYILASSGSQRDILSLSAHYQQQQQQHHHQQQQQQYQLQHSTVMASPMQSTAMPNKAPTHRSYQHQSAAQSLSTGGGNNVGGMAALSPHVQQVASSSSSGKESLTTSASSATAGNNSAVAGSCGGTILGNISAITATPGGGHQVNVELVQEHISKLISQNEAIVENKELLLQKKYPKTLNRSRSFTNANNSAAMSNNNSSSLVPASGMPSGESASTKLAQVIAHKQQLQQQQQQQQQQQQQQQQQQQQQQQQQLQQQQQQQQQQQQQQLQLQQQLQQQQIQQQQYLRGFTEDHIQRLAANSYNNPINGMSKNLNKLAAVSIMIPSMVQQPQPQQRVPHVPIQTPVPTPTPSPSQMTSASPIPKESAQPSSVNVPLNLSKAVDSNSNAAVSEAPSTSGLSRKRLSIESQSSPAPPADNIVTSSTSSGKSPAMHPQNPSYSIIKNLLLNARGLAVPTGEGDDAVYICPLCTMEFRTAEDLQVHNSAYCHGSPSSASISPSSSPSSKYFRSNSLRLAELNTPNTLAKLALVKLAWSQLKTKPSTLVLNQLSGTSGASSSAAPTPSTSSGLVSIRSSTPSSSVTSSSTPLPLQEVITSNRFIDTPLPSPGPLLGKTPLVEAYNHNERKSEEIVIRKVHDDHQSAFRSTTANKRPKYEQPATSYHQTHPHHTSTKPNSNHQEKDDRIKRFVSSGGCMVPISECSDVDMSPKMLRTPLLSGGSFQEVSPKPKEPLQASNRPLGTPNMMIPITPLTPSLPPGLQMSGPKHFQFPPINPITAFNPLTLPILQQSGGEKVIPYVPGIPGPNSLTPQLPPPPQQLQVPTQSRNLSPNRQKIPSPVVLPGMMEGSAYSPKPKSMLMEVDGRNLSPFGGVNNVPSEFNRVPPSPALRAARKSSQTPVSLEVPKKSFNFLRMADNVSPRKVSKAPENTEKEVRYFNFDHLSKEPELVTPIRPQQDPMTPLHVEVSNSYRRCADSSIDTVVEPVDEKSSPSKRTKFLRPTSLPLKPGTFTPKRHHGITPTANTLPLISPETPRPSKACVQLYLNGHAYTYLGLKCSTKMFYCTVNCPQPSYVANLHKLSMYSVWQVCAENNPHPMGFKPKTVMALYDARQKSCALTMAGRVTVCSTVHSQHSVMTPFEDNMGQFYHHQLKALPAPALEETSSKSDSAADKDSANSQQLLVGGYESNENYTYIRGRGRGRFVCLECGIRCKKPSMLKKHIRTHTDVRPYTCKHCNFSFKTKGNLTKHMSSKTHFKKCHELGINPGPMPADGEFTEPDFEYDQQSITSGGGRTSSLPGESDSDDFTDNETESSDTDESKSRLQEHEAARSLLSLSMTPPIVSSVSPKDSYTYQQTELTTPQQQQQVLRRVVSFTSPKPPFDYQKQEQYYSNPEESKPKLPRSFDESTMLPIDLTKPRSHEPLKPLPLHQMQHQSAAQIRDVIGSVSNESMFMKSLIKVTDRVRTATECSPSRLDGALHHAYLTEQALHYTKIKQSQMSRSSIEAASGSSSTYTTTNAIGGGGSLLTMSSTSVSSTVMVSSSVMSTNVMSTPTFVEDTPNPKLIEPAKPDNEVPAVTASTLEAAPTTKESTKSSKSKAPGSAKSVASEYLKMTSLKSKTSSSSKSLAKPEESGDESMSDHEVATATDPIATPPTSQSSTAPDFAGVLARTVIVGEDGLKSSSNEIQPAYPRVAISSDGRPVCTICSKTFQKQHQLVLHMNIHYMERKFKCEPCAVSFRTQGHLQKHERSEGHRTKMMMTSTFGVPTTSNPRPFECTDCKIAFRIHGHLAKHLRSKTHVQKLECLEKLPFGTYAEIERAGISLTEIDTSDCDNSLKSLKVLAQKLIEIDPKKMGTYTTPSGMPDVPNSNTNGDSGSEDGYDAQNSTDEGGAKGDENSTPNAASHSLKRRNRPFSSSDEEQQQQDSIIPEKRTRTHSEMSSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00312970;
90% Identity
iTF_00312125;
80% Identity
-