Basic Information

Gene Symbol
Hivep1
Assembly
GCA_955612985.1
Location
OY015314.1:34108117-34116577[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.00053 0.062 14.5 2.1 1 23 372 394 372 394 0.97
2 8 0.0065 0.77 11.1 4.8 1 21 400 420 400 424 0.89
3 8 0.0078 0.92 10.9 0.5 1 19 1139 1157 1139 1163 0.94
4 8 1.3e-05 0.0015 19.6 1.8 1 23 1872 1894 1872 1894 0.98
5 8 1.3e-05 0.0015 19.6 5.5 1 22 1900 1921 1900 1924 0.91
6 8 0.00026 0.031 15.5 2.0 2 23 2371 2392 2371 2392 0.97
7 8 0.005 0.58 11.5 0.8 1 23 2398 2422 2398 2422 0.91
8 8 0.0027 0.32 12.3 2.7 1 23 2443 2467 2443 2467 0.92

Sequence Information

Coding Sequence
ATGGATGACACCAAGCAATTGACTACATCCAAAAAACAGCAATCACAAACACACTATAAAACCCCTATTGGTTCGAACAACCATTTGAACAGCAGTGATACAAGTAATAACAATAAGAAACACCACAATAATCAGCAAAATCATAGACAACAACAATCCGCAGGCGgaacaacatcaacaacaacgacgacgacgagtaaTGGTGAAAAACAATCAGGCAGCAGTACCACTACCATAACTTCAAAGTCCTCATcagcaccaacaacaacaacaacaaaaacaacagcagcagcaacaactaCCCACCGTTCCGAAAAGAAATCCGCCGTCGCCGATAATCATAGCCCAAACGCCAAAATGACCCTTAGCGATACAAATAAGCTAACGTCGGATCTTATcagcagcagtagcagtagcaccAATAGTGATAATAGTAGTTTAAGTAGcaacattaacaacaacaataacagcaATAACAATAGCAACCACAacagcaacatcaacaacaacaacaacaataatatcaaCAGCAACAAAAGCTTAATGAATGAATCATCATCGATATCCACAACACCATGGAACAATCCCAAGTACCTGCATAAGAAATTTAAGCGCATGGCTAGCACAACAACCACCACCAGTGCTAACCCATTGGAGCATAATGAAGCTATCGAGACTAGAGGATCATCATCGATATcctcgtcatcatcgtcatcctcgCCAACATTAACGTCACCAATATCCGAATCACCACCAATGGCTGTGGTGTTAAATGGTAATGGTGCCGCCGAAGAACGAGTGCCACCGCTGACGAATGGTCATTCGCCGGCATTAGCGGCGGCTTATGCTGCCAGCAGTAGTGCCAACGATAGTAAGAAGaaatcaaacaacaacaacagtagtAGTAATCTAAGCAACAACAGTGATTTAGCCCTAAGTAGTAGCAGTAGTAACAATAGTAATAGTGTTGGACAAGTCCAGAGGACAGCGTCTAGTATTAGCGTAGTATCAATGCAAAAATTGGCGCAACAATCAAACAACCCACAACAACAACCACAATCGAAGCAGACCAGCGGTGGTAGTACAGATCCACTTGGGCAACAACTATCACGGCATGTTTGCCCGTATTGTAATTTAAATTGTACAAAGCCATCGGTACTACAGAAACATATCCGTGCACACACAAACGAACGACCATATCCCTGTGATACATGCGGTTTTGCATTTAAGACAAAGAGCAACTACTACAAGCATTGCAGATCGAGATCGCATGCGTTGAGAACTGGAGGCGTCGAACCGCCCACCGATGCCGATGAGGGTTCAATGGGTGCTTCAGATCAGGAGCAGGATCCTGATATGAGCAATAGCAGCTCCGATGTGATAAGCCGTACAACATCTCCCCTCGACGAGAGGACATCTTCACCTGCTGTCCTGCCCGGCCAACTGTCGTCGTCTACATCGAGTCCAGATTCAAAGAGTTTCCTTCAGCCATCTCAATTGGCGTCACCTAATCAACCTCAGCAACAGTCAGCAGCTACAACCACCGCCAGCAGtccaaaacaacaaaattattcCAATGATAAACCCTACAAACCAAAGTTTCACAATGCTGCCCTTTATGCTGCCAATAAactgcaacagcaacagcagcaactacaattgcaacaacaacagcaacaacacctgcagcaacagcaggaacaacaacagcaacttCAGGAAGAAGCCAAGCAACAGCAACAGATTCAGCAgcatcagcaacagcagcatCAGCAAGAGCAACGCCAACACCATCAtctacaacaacagcaacaacaacaacaacatcatatTCATCACCCGAACGCTCTACAGCCCCCTCAATCAGTGGCGCTGCAGCACGTAAACAACTCTATCAAAGTATCCAGCCATCACCTGAATAACAATCATCAATTAATACCAATGCAAGGACCACTGCCTCTTCCGCCACATGCCTCACCAACTGGCGGATACTATGTCAATCCCGGACTACCTCCCCATGCCCAGTACTATAATCCCCAGCATCAGCAAGCACCGTATATCCTTGCATCATCGGGTGGCCAGCGAGAAATTATGTCATTATCGGCACACTACCAACAacagcatcagcagcagcatcaccaccaacagcaacaacaacaacaacagcaacagtatCAGTTGCAACATTCCACCGTGATGGCTTCTCCGATGCAGCCCACCGCCATGCCCAACAAAACCCCATCGCACCGTAGTTATCAACATCAATCGGCGGCAGCATTGTCGTCACAAAGTCTAGCCACTGGGGGTGGTAATAATGGTGGTGGAATTGCGGCGCAATCGCCACATGTGCAACAGGTGGGCACCAGCAATAGTAGTAGTGCCAAAGAGTCATTAAcaacatcgtcatcatcatccacAACTACAGGCAACAACAGTGCTGTAGCTGGCAGTGGTGGTGGAACAATTTTGGGCAACATATCCGCCATAACAGCCACACCAGGCGGTGGACATCAAGTGAATGTGGAACTTGTGCAGGAgcatatttccaaattgatatCGCAGAACGAGGCCATAGTAGAGAACAAGGAACTACTCTTGCAAAAGAAATATCCTAAGACTTTGAACCGGTCTAGAAGCTTTACGAATGCTAACAATTCAAACACGATGTCCAGTAACAGCAACAGCAGTCTAGTGCCTGCGTCTGGAATGCCTGGTGGCGAAAGTGCTAGCACTAAGCTGGCTCAGGCCATCGCTCACAAACATCaaatgcaacaacaacagcagcaacaacagcaattgcaacaacaacagcaacttcagcagcagcagcaacagctccaacaacaacaaatccAACAGCAACAGCTGCAACAGCAGCAATTCCTAAGAGGCTTAACCGAAGACCACATTCAGAGGCTAGCGGCGAACACATACAACAATCCGGTAAATGGCATGTCCAAGAACCTGCACAAACTGGCTGCTGTGAGTATTATGATTCCTTCCATGGTTCAGCAGGCACAACCACAGCAGCGTATTCCACATGTTCCTATACAAACCCCAGTACCTACACCAACGGCATCGCCTTCACAACTGAGCAGCGCACCGCCAATGCCGAAAGAAAGCACGCAGCCAGCAGCAGTCAATGTTCCACTTAACCTATCTAAGGCAGTAGATTCGAGTTCAAATTCTACCGCAACAGAGACGCCCAGCACCAGCGGACTCTCAAGGAAGCGGCTCTCCATCGAATCGCAGTCCTCACCAGCGCCAGCCACTGACAACATAGTCACTAGCAGCACGAGCAGCGGCAAAAGCCCCGCGATGCATCCTCAAAATCCCAGTAACTCGATTATTAAGAATCTTCTGCTGAACGCCAGAGGCTTAGCCGTGCCAACAGGTGAAGGCGACGATGCGGTCTACATTTGTCCTCTGTGTACAATGGAGTTTCGCACCGCCGAAGATCTGCAGGTACACAATAGCGCCTACTGCCATGGTTCGCCATCTAGCGCTTCGATTAGTCCATCCTCATCGCCATCATCCAAGTACTTCCGTTCGAATTCTCTAAGGCTGGCGGAGCTGAACACCCCTAACACGCTGGCTAAACTGGCATTAGTCAAACTCGCCTGGTCACAGCTAAAGACCAAGCCCAGTACTCTAGTGTTGAATCAGTTGAGCGGCACAAGTGGTGCATCGTCATCGGCGGCTTCCACACCATCTACATCATCTGGCATTGTCTCCACTTCCAGCGCCACGCCATCGTCATCATCAGCGGCGACATCttcatcgacaccggtgccattGCAGGAGGTCATCACGAACAATCGATTTATAGACGCCCCTTTGCCATCGCCAGGGCCGTTGCTAGGCAAAACCCCACTTGTTGAGGCTTACAATCACAACGAGCGCAAGTCGGAGGAGATTGTTATAAGGAAGGTACATGACGATCATCAATCGGCGTTTCGATCTACATCAGCAAACAAACGTCCGAAGTATGAACAGCCTGCGACCAGCTACCATCAAACGCATGCGAATCCTCCTATGACGAAACCAAACAGCAGCTACCATGAGAAGGATGATCGCATTAAGCGGTTCGTATCCTCCGGCGGATGCATGGTTCCAATCTCAGAGTGTCCTGATATCGACATGAGTCCCAAGATGATACGAACTCCCCTTTTGTCCGGGGGTAGCTTTCAAGAGGTTTCGCCTAAGACAAAGGAACCCCAACCAAACAGGTCGTTGGGAACACCCAAGATGATGATTCCTATCACACCACTAACGCCAAGCTTACCACCAGGGCTCCCGATGTCAGGGCCGACACATTTTCAGTTTCCTCCTATCAACTCCATCACAGCATACAATCCGTTGACGCTGCCAATTCTCCAACAGAGCGGTGGAGAGAAAGTGATTCCTTATGTACCCGGCATTCCCGGTCCGAATTGCTTGACTCCACAATTGCCGCCTCCACCACAACAGTTGCAGGTCCCCACGCAGTCGCGTAATCTCAGTCCCAACCGACAAAAGATACCCAGTCCGGTGGTACTGCCGGGTATGATGGAGAACTCTGCTTATAGTCCGAAGCCAAAGTCGATGCTAATGGAAGTTGATGGCCGTAATTTGTCGCCCTTTGGAGGAGTGAACAATCTGCCAAGTGAATTCAATCGCGTTCCACCATCCCCAGCTTTGAGGGCAGCACGATGGCAATCTCAAGCACCAGGGAGCCTGGAAGTACcgaagaaatcctttaactttcTGCGCATGGCGGACAATGTGAGTCCGCGGAAAGTTAACAAGGCCCCTGAAAACACCGAGAAGGAAGTTCGGTACTTCAATTTCGACCATCTGTCCAAGGAACCGGAACTTGTAACCCCTGTCCGACCGCAGCAGGACACAATGACACCGCTCCATGTTGAGGTATCGAATTCCTACCGTCGATGTGCTGACTCCAATGCCGACACTGTTGTTGAATCAATGGACGAAAAGTCATCCCCATCGAAGCGGTCAAAGTTCCTACGCCCAACTAGCCTTCCCCTTAAGCCAGGTACGTTCACGCCTAAGCGTCATCATGGAATCACGCCGACCGCCAATACGCTGCCTCTGATTTCTCCAGAGACTCCACGGCCATCGAAAGCCTGTGTGCAGCTATATCTAAACGGACACGCTTACACGTACCTCGGGCTAAAGTGTAGCACAAAAATGTTCTACTGCACGGTGAACTGCCCACAACCGTCTTACGTGGCGAACCTGCACAAGCTGTCGATGTACAGCGTTTGGCAGGTCTGCGCCGAAAATAACCCTCATCCGATGGGCTTCAAGCCGAAGACCGTGATGGCTCTGTACGACGCTCGCCAGAAGTCGTGCGCCTTGACGATGGCCGGCCGAGTGACGATCTGTTCCACTGTGCACTCGCAGAATTCGGTGATGACACCGTTTGAAGATAACATGGGACAGTTCTACCACCATCAGTTGAAGGCTTTACCAGCACCACCGTTGGAGGAGACGTCAAATAAATCCGATTCTGCGGCTGACAAGGACTCTGCAAATAGTCAGCAGCTTTTGGTTGGTGGCTACGAGTCGAATGAGAACTATACATACATCAGGGGGCGTGGAAGAGGACGTTTTGTATGCTTAGAATGCGGTATCCGTTGCAAGAAGCCATCGATGCTGAAGAAGCATATTCGGACGCACACCGACGTGCGGCCGTACACATGCAAACACTGCAACTTTAGCTTTAAGACAAAGGGCAACCTCACAAAGCACATGTCGTCGAAGACACATTTCAAGAAATGCCATGAGCTTGGCATCAATCCGGGTCCAATGCCAGCTGATGGTGAATTCACCGAACCAGACTTTGAGTACGATCAGCAGTCGATCACTTCGGGTGGCGGTCGAACGTCTTCGCTGCCGGGTGAATCAGATTCGGATGATTTCAGTGACAACGGAACTGAGAGCAGTGATACCGATGAATCAAAGTCGCGCCTTCAGGAACACGAGGCGGCGCGTTGCCTCCTATCCCTCTCAATGACACCACCGATAGTCAGTAGTGTTTCTCCAAATGACGCATACACATATCAACAAACTGAACTCTCGACgccacaacaacagcagcaggtGCTGCGTCGCGTGGTTTCATTTACATCGCCGAAACCTCCATTTGACTACCAAAAGCAGGAGCAGTACTACTCCAATCCAGAGGAATCCAAGCCCAAGTTGCCGCGTACTTTCGACGAATCGACCATGCTACCGATTGACCTGACCAAACCTCGTTCCCACGAGCCACTGAAACCAATGCCCCTACATCAAATGCCACATCAGTCGGCCGCTCAAATCCGTGATATCATCGGCTCGGTTAGCAATGAGTCAATGTTCATGAAATCGCTGATCAAAGTGACAGATAGAGTTCGTACGGCGACCGAGTGCTCCACGTCCAGGCTAGACGGTGCCTTGCATCATGCATATCTCACCGAGCAAGCGTTACACTACACTAAGATCAAGCAGAGCCAGATGAGCCGGAGTTCAATTGAAGCTGCATCCGGATCGAGCAGCACTTATACCACTACCAATGCAACAGGTGGTGGTGGTAGCCTCTTGGCAATGAGCTCAACATCAGTTGCATCGACGGTGATGGTGAGTTCGAGTGTGATGAGTACAAATGTACTGAGCACTCCAACGTTTGTTGAGGAATCGCCAAAGCCGAAGCTAATTGAGCCGCCGCAAAAACCTGACAAGGAAGTGCCAGTTGTCACCGCTTCCGCACTAGACGTAGTACCAACGACAAAAGAATCAACAAAGTCATCGAAATCAAAAGCTCCAGGTAGTGCCAAGAGTGTCGCATCCGAGTATCTCAAGATGACCAGCCTAAAGTCGAAGACGTCATCGTCGACGAAATCTTCGACAAAACCTGAGGAAAGTGGTGATGAAAGCATGTCTGACCATGAAGCCGCCACCGCTACAGATCCAATAGCTACACCTCCAACATCTCAGTCGTCGACAGCGCCAGATTTTGCTGGCGTGCTTGCCCGAACCGTTATCGTCGGCGAGGACGGCCTTaagagctcttcaaatgaaatACAGCCCGCCTACCCACGAGTAGCGATCTCTAGCGATGGTCGTCCAGTGTGTACCATCTGTTCGAAGACCTTCCAAAAGCAGCATCAACTAGTACTCCACATGAACATTCACTACATGGAGCGAAAGTTCAAGTGCGAGCCGTGTGCAGTGAGCTTCCGCACTCAGGGTCACTTGCAAAAACACGAACGTTCCGAAGGACACCGGACAAAAATGATGATGACTTCCACCTTTGGTGTACCAACGACATCAAATCCGCGACCATTTGAGTGCACCGATTGTAAGATTGCCTTCCGAATCCATGGTCATCTGGCCAAGCATCTGCGATCGAAGACGCACGTCCAGAAGTTGGAGTGCCTAGAGAAGTTGCCATTCGGTACATATGCTGAAATTGAACGGGCCGGCATCAGCCTTACCGAGATCGACACAAGCGACTGCGATAATTCCCTAAAAAGTCTGAAAGTGCTGGCCCAAAAGCTAATTGAAATAGACCCCAAGAAAATGGGCACGTACACAACACCCTCGGGAATGCAGGACGTTCCCAACTCAAACCCGAACGGCGATAGTGGCAGTGAGGACGGCTATGACGCCCAAAATTCCACAGACGACGGTGGAGCCAAGGGCGATGAAAATTCGACGCCAAACGCTGCCATCCAGAGTATGAAGAGGCGAAATCGTCCCTTCAGCAGTAGTGACGAGGAGCAACAGCAGCAGGATGGTATTATTCCAGAGAAGAGGCCGCGAACGCAGAGTGAGGTGTCATCGAATTGA
Protein Sequence
MDDTKQLTTSKKQQSQTHYKTPIGSNNHLNSSDTSNNNKKHHNNQQNHRQQQSAGGTTSTTTTTTSNGEKQSGSSTTTITSKSSSAPTTTTTKTTAAATTTHRSEKKSAVADNHSPNAKMTLSDTNKLTSDLISSSSSSTNSDNSSLSSNINNNNNSNNNSNHNSNINNNNNNNINSNKSLMNESSSISTTPWNNPKYLHKKFKRMASTTTTTSANPLEHNEAIETRGSSSISSSSSSSSPTLTSPISESPPMAVVLNGNGAAEERVPPLTNGHSPALAAAYAASSSANDSKKKSNNNNSSSNLSNNSDLALSSSSSNNSNSVGQVQRTASSISVVSMQKLAQQSNNPQQQPQSKQTSGGSTDPLGQQLSRHVCPYCNLNCTKPSVLQKHIRAHTNERPYPCDTCGFAFKTKSNYYKHCRSRSHALRTGGVEPPTDADEGSMGASDQEQDPDMSNSSSDVISRTTSPLDERTSSPAVLPGQLSSSTSSPDSKSFLQPSQLASPNQPQQQSAATTTASSPKQQNYSNDKPYKPKFHNAALYAANKLQQQQQQLQLQQQQQQHLQQQQEQQQQLQEEAKQQQQIQQHQQQQHQQEQRQHHHLQQQQQQQQHHIHHPNALQPPQSVALQHVNNSIKVSSHHLNNNHQLIPMQGPLPLPPHASPTGGYYVNPGLPPHAQYYNPQHQQAPYILASSGGQREIMSLSAHYQQQHQQQHHHQQQQQQQQQQYQLQHSTVMASPMQPTAMPNKTPSHRSYQHQSAAALSSQSLATGGGNNGGGIAAQSPHVQQVGTSNSSSAKESLTTSSSSSTTTGNNSAVAGSGGGTILGNISAITATPGGGHQVNVELVQEHISKLISQNEAIVENKELLLQKKYPKTLNRSRSFTNANNSNTMSSNSNSSLVPASGMPGGESASTKLAQAIAHKHQMQQQQQQQQQLQQQQQLQQQQQQLQQQQIQQQQLQQQQFLRGLTEDHIQRLAANTYNNPVNGMSKNLHKLAAVSIMIPSMVQQAQPQQRIPHVPIQTPVPTPTASPSQLSSAPPMPKESTQPAAVNVPLNLSKAVDSSSNSTATETPSTSGLSRKRLSIESQSSPAPATDNIVTSSTSSGKSPAMHPQNPSNSIIKNLLLNARGLAVPTGEGDDAVYICPLCTMEFRTAEDLQVHNSAYCHGSPSSASISPSSSPSSKYFRSNSLRLAELNTPNTLAKLALVKLAWSQLKTKPSTLVLNQLSGTSGASSSAASTPSTSSGIVSTSSATPSSSSAATSSSTPVPLQEVITNNRFIDAPLPSPGPLLGKTPLVEAYNHNERKSEEIVIRKVHDDHQSAFRSTSANKRPKYEQPATSYHQTHANPPMTKPNSSYHEKDDRIKRFVSSGGCMVPISECPDIDMSPKMIRTPLLSGGSFQEVSPKTKEPQPNRSLGTPKMMIPITPLTPSLPPGLPMSGPTHFQFPPINSITAYNPLTLPILQQSGGEKVIPYVPGIPGPNCLTPQLPPPPQQLQVPTQSRNLSPNRQKIPSPVVLPGMMENSAYSPKPKSMLMEVDGRNLSPFGGVNNLPSEFNRVPPSPALRAARWQSQAPGSLEVPKKSFNFLRMADNVSPRKVNKAPENTEKEVRYFNFDHLSKEPELVTPVRPQQDTMTPLHVEVSNSYRRCADSNADTVVESMDEKSSPSKRSKFLRPTSLPLKPGTFTPKRHHGITPTANTLPLISPETPRPSKACVQLYLNGHAYTYLGLKCSTKMFYCTVNCPQPSYVANLHKLSMYSVWQVCAENNPHPMGFKPKTVMALYDARQKSCALTMAGRVTICSTVHSQNSVMTPFEDNMGQFYHHQLKALPAPPLEETSNKSDSAADKDSANSQQLLVGGYESNENYTYIRGRGRGRFVCLECGIRCKKPSMLKKHIRTHTDVRPYTCKHCNFSFKTKGNLTKHMSSKTHFKKCHELGINPGPMPADGEFTEPDFEYDQQSITSGGGRTSSLPGESDSDDFSDNGTESSDTDESKSRLQEHEAARCLLSLSMTPPIVSSVSPNDAYTYQQTELSTPQQQQQVLRRVVSFTSPKPPFDYQKQEQYYSNPEESKPKLPRTFDESTMLPIDLTKPRSHEPLKPMPLHQMPHQSAAQIRDIIGSVSNESMFMKSLIKVTDRVRTATECSTSRLDGALHHAYLTEQALHYTKIKQSQMSRSSIEAASGSSSTYTTTNATGGGGSLLAMSSTSVASTVMVSSSVMSTNVLSTPTFVEESPKPKLIEPPQKPDKEVPVVTASALDVVPTTKESTKSSKSKAPGSAKSVASEYLKMTSLKSKTSSSTKSSTKPEESGDESMSDHEAATATDPIATPPTSQSSTAPDFAGVLARTVIVGEDGLKSSSNEIQPAYPRVAISSDGRPVCTICSKTFQKQHQLVLHMNIHYMERKFKCEPCAVSFRTQGHLQKHERSEGHRTKMMMTSTFGVPTTSNPRPFECTDCKIAFRIHGHLAKHLRSKTHVQKLECLEKLPFGTYAEIERAGISLTEIDTSDCDNSLKSLKVLAQKLIEIDPKKMGTYTTPSGMQDVPNSNPNGDSGSEDGYDAQNSTDDGGAKGDENSTPNAAIQSMKRRNRPFSSSDEEQQQQDGIIPEKRPRTQSEVSSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00312125;
80% Identity
-