Csor006145.1
Basic Information
- Insect
- Cheilosia soror
- Gene Symbol
- bab2
- Assembly
- GCA_948107745.1
- Location
- OX443561.1:109717173-109719483[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-12 7e-10 39.1 0.0 4 45 389 430 386 430 0.92 2 2 0.14 84 3.7 1.1 4 20 519 534 518 534 0.93
Sequence Information
- Coding Sequence
- ATGGGTGGCCCCACAACCGCCGAAGGGCAAACCTATTGCCTGCGATGGAACAATCACAAATCGAATTTAGTCGAGATCCTCGATGCTCTCATCAAAATGGAGAGCTACGTGGACTGCACTATAGTCGTTGACGACCAAGTGCAATTCAAGGCCCACCGAGTTGTGTTGGCGGCAAATTCTCCATATTTCCAATCGATCCTGCAAGACGTGCCAATGGATCATTGTAGCATTCTGTTTCCCGGAGTTCAGGCGTTCGAAATGCGCGCTCTTCTCGAATACATGTACACCGGCGAGGTGAATGTCACACAGAGTCAAATTCCAAAAATAATGCGAATAGCCGAGCAGCTAGAAGTGAAAGGACTCTTCGACATGGCCGACTTGAAggaaaaattcaataaattcgAAGAGAGTGGCAATGGTCCATATTCGACGTCAACGAGTGCCGCAGCAGCTGCAGCTGCCTCATCGTCATCATCTCATCACGGACTGGATCATCGTTCGATGAAAGAAAACAGTGAAGCACTGCATTCATCACCGGTGATTACAACCTCAACAAATATTAGTCCACCGGCAGCGCCAACGAGTAGTTCGTCACCGCCATACTCGTATAAGTCACCGTATGCGAATATCTATTCGAAAAGTCCACAACCTGGTCCCTCGGCAATGGATCGGCATTCTTCTTGGCCAATCTCACCAGTGATGCCAAATTCAATGCCTGCCAATGCTGCCGCTATGTTGAGTTCTGTTTACGAAACTGCGCCGGATATGAATCCATTGAAACGCAAGAAACTCTCATCGATCTCGAGTATGCTGATGAATCGTGACACACCGATTTTGCGAAACGTTTTGGCACAATCACATTCCGCGGATTCGTCACAGCCAATGCCGCTGGTTTGTCAAACGGTAAAGAATGAAAAGTCTGAGAAATCACCACAggtcggtggtggtggtggagtcGGAGCGAACAGCTGCAATGGATCGGACTACAGCAATGAGAAGaaatcaaaATACGATGAACCCCACTCACCCTATACTGACCGGTCATACGAAGACGATGGACTCGATTGCTCTCAGTCTTATCCGGGTGAAAATCGTCTCAATTCATTTGGTTcgcaacagcaacaaaaacCAGAATGGAAACGCTACAAGCAATACACCCGCAGTGACATTCTTCAAGCTATCGAATGCGTTCGCAATGGCATGAGTGCCCTGCAAGCATCCCGCAAATATGGTGTTCCATCCCGCACGCTATACGATAAAGTGAAGAAACTTGGCATCACAACCGGCCGTCCAATGAATCGAACAATGAAGCGCAGTCCAAGCAATGGTGGCAGCGGTGCTGCCTTCCCTTATAGCCATGGATACGGTCATGGTCAGTCTGAACCTCTGCTCTCATCCATGCATGATGGCGGTGATCGTGAAAAAGATCACGAACGTCATCTTCCGCCTACCATTCCTCATCCAGCTGCGGCTCTACTTGATCCAGCATTTCTGCAACAGGCCTTCGAAAGCCGTGGTGGTGACATCGCCGGTCGGGAAGCTCTCCATGCTATGGCATTAGCCGCTGCTGCCCATGCAGCTGTCAATGGCATGTCAACGAGTCCGGGTACTAATGGCACTGCACGATCGCCCAGTCCTAGTTTTGCTATGAAATACGCAAGATCTCAGAGTCCAGCCGCCAATCAGTATCGCGAACGAGAAATTATGATCGAACGTGAGCGCGAACGTGAACGCGAACGCGAAAGGGAACGTGAACGCGagcgtgaacacgagcgtcgaaTGATCGATCGGGAAATTATGGAAAAAGAACGATTCAAGCGGGACATGGAAATGGAACGCGAACGTGAACGTGAACGAGAGCTGTCCGAACGTCATCGGGACGATCGGGAACGTGATGAAGAGGATGACCATGTAGAGGATTTATCTGTGACGCGTAAAGACAGCCTCTCACCGAATCCAAACAATCATCATGGAGTAATAATGCCACCGATGAGTACCAAACTTCCCGCGAATAGCAGCGATGATTTCAAAGTAAACGAAACCACCAAACGTGATATTCTCACAGAAGATCGTGATTAG
- Protein Sequence
- MGGPTTAEGQTYCLRWNNHKSNLVEILDALIKMESYVDCTIVVDDQVQFKAHRVVLAANSPYFQSILQDVPMDHCSILFPGVQAFEMRALLEYMYTGEVNVTQSQIPKIMRIAEQLEVKGLFDMADLKEKFNKFEESGNGPYSTSTSAAAAAAASSSSSHHGLDHRSMKENSEALHSSPVITTSTNISPPAAPTSSSSPPYSYKSPYANIYSKSPQPGPSAMDRHSSWPISPVMPNSMPANAAAMLSSVYETAPDMNPLKRKKLSSISSMLMNRDTPILRNVLAQSHSADSSQPMPLVCQTVKNEKSEKSPQVGGGGGVGANSCNGSDYSNEKKSKYDEPHSPYTDRSYEDDGLDCSQSYPGENRLNSFGSQQQQKPEWKRYKQYTRSDILQAIECVRNGMSALQASRKYGVPSRTLYDKVKKLGITTGRPMNRTMKRSPSNGGSGAAFPYSHGYGHGQSEPLLSSMHDGGDREKDHERHLPPTIPHPAAALLDPAFLQQAFESRGGDIAGREALHAMALAAAAHAAVNGMSTSPGTNGTARSPSPSFAMKYARSQSPAANQYREREIMIEREREREREREREREREREHERRMIDREIMEKERFKRDMEMERERERERELSERHRDDRERDEEDDHVEDLSVTRKDSLSPNPNNHHGVIMPPMSTKLPANSSDDFKVNETTKRDILTEDRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00241576;
- 90% Identity
- iTF_00313586; iTF_00314192; iTF_00314447; iTF_00311734; iTF_00311919; iTF_00315286; iTF_00315076; iTF_00724694; iTF_00724914; iTF_00311159; iTF_00310952; iTF_01254072; iTF_01253449; iTF_00315865; iTF_00316085; iTF_00312732; iTF_00312514;
- 80% Identity
- iTF_00313586;