Csor023152.1
Basic Information
- Insect
- Cheilosia soror
- Gene Symbol
- retn
- Assembly
- GCA_948107745.1
- Location
- OX443564.1:27749220-27817680[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.74 2.7e+03 -0.5 0.0 41 65 78 103 73 114 0.75 2 2 2.4e-26 8.7e-23 81.2 0.0 2 89 243 328 242 328 0.96
Sequence Information
- Coding Sequence
- ATGACCCCATTGTCAAACGACGAACATTCTGAGGACGACATAAGAGACTGCGAGTCAGTTGATGACGAGAATACCAGCCGATTAAACGCGTCGATGTCCAACGGCATGGCCATGGACTACGGGGGAATCGGCGGAGCCAGGAGTCCAGAACAACACAGCGCAGAAATTCAAATGAGTCACCATCATGCACAGTTCGCCACGAACCATCCGCTGGGAGCACTGGGCAATTTCATGAGTATGGGCGGTTTGCACAGCATCCCCAATCTGCAGCAGCAGCACAACGACGTGCTGGAAAAACTGAAAATGCAGGTCCGCGACATGAAAGTCGGCCTGATGGACCAGGAATACCCACCACATGCAAACTTTGGCTCAAATGTCATTCCAACCCCCATCAATACGGCGTTCACAATCCCGTCAACTTCTCATACCTCGTTTGGTCACTCCCCGCAGAATCTCTCGCAGCCCTCACCGCAGCCACAGCAAACCTTGCTATCAACgcaccaacagcaacaacaacagtcgCAGTCACAAACGAGTTCCCAATCGATGCCGAATGGTTTCTCGTTCACATCACCCTCAGCCCCAAGCACAAAAGACGTGAATCCTGCGTCCAACTCATCAACATCCAGCGAAACATCTAACTCATCGCAGCAGAATAATGGATGGAGTTTTGAAGAGCAGTACAAACAAGTTCGACAGCTCTATGAAATAAATGATGACCCTAAGCGCAAGGAGTTTCTCGATGACTTGTTTTCCTTCATGCAGAAGCGTGGTACGCCCATAAATCGCTTGCCCATCATGGCGAAATCGGTGCTCGATCTGTACGAGCTGTACAATTTGGTTATAGCGAGGGGCGGTCTCGTCGACGTGATCAACAAGAAGCTGTGGCAGGAAATCATAAAAGGACTGCATTTGCCGTCGAGCATAACCAGCGCAGCGTTTACCTTGCGCACGCAGTACATGAAATATTTATATCCATACGAATGTGAAAAGAAGAACTTGAGCTCACCCGCCGAACTTCAGGCTGCGATCGATGGTAATCGCCGAGAGGGACGTCGTTCCAGCTATGGTCAATTTGAGGCTATGCACAACCAAATGCAGATGCCTCAAATGGGAAGATCAAATCTCCCCGGTGCAATGCAACAAATGTCTCCACTTGCCCTGGTCACCCATGGCAATCCACAAGCGGCTGCAGCAGCCGCACATCACAGACTGATGGCACCATCATTTGGTCAGGTACCCAATTTGGTACAACATGAAATCGAGCAACGCATGATGGAATATATAAAGTTGATTCAGACGAAAAAGGAACAACCCCGCCCCAGATCCCAGAGTCCAGAGACAACCACGCGCGAAGCGTTAAATGCCCTCGAAATGTCGCGTGTCGCCTTGTGGTCGATGTATCACAACAACACAAGTCCACCAGCATCGGTGAATACTTCACCACAGGGAGTCGAGCCACAACGTGAGGCACTCAACCTTTCGGACTCACCACCGAATATCCAAATCAAACGTGAACGTGAACGTGACCCTTCGGAGTTGAGTGCAATCTCGGATAGAGAAGATTTCAATCAACCACCACCGGCGAAGCGAGGATTTCCAACAAACCTATATATACCACCTGTTCGGAGTAGTTTTCACGAGGACCATGATATCGAAGATACAGACAATTCCACAGCTAATACCTCACATGAACACGAAGAGTTACACCATCATGACATAGAAATGAAGCCACCTGCGGAAAGGAATAATCAACATTCACCGCTGATGCTGTCGCCACCGAAGAAACTAAATTTGAGTTTTAACGGAAATGACAATGTTAGCACTCAACATAATCGGCTGCAGGAAGAACCAGAGAAGATGGCTCAACATGACATCACCAATACGGAGTTGACACTGCTCTCGGGGATGCAGTTTAAGTTGTCGCGGAAATGTGAGTATTTGTTGTATTTGCTAAAGTTTATCTTTATATAG
- Protein Sequence
- MTPLSNDEHSEDDIRDCESVDDENTSRLNASMSNGMAMDYGGIGGARSPEQHSAEIQMSHHHAQFATNHPLGALGNFMSMGGLHSIPNLQQQHNDVLEKLKMQVRDMKVGLMDQEYPPHANFGSNVIPTPINTAFTIPSTSHTSFGHSPQNLSQPSPQPQQTLLSTHQQQQQQSQSQTSSQSMPNGFSFTSPSAPSTKDVNPASNSSTSSETSNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSSPAELQAAIDGNRREGRRSSYGQFEAMHNQMQMPQMGRSNLPGAMQQMSPLALVTHGNPQAAAAAAHHRLMAPSFGQVPNLVQHEIEQRMMEYIKLIQTKKEQPRPRSQSPETTTREALNALEMSRVALWSMYHNNTSPPASVNTSPQGVEPQREALNLSDSPPNIQIKRERERDPSELSAISDREDFNQPPPAKRGFPTNLYIPPVRSSFHEDHDIEDTDNSTANTSHEHEELHHHDIEMKPPAERNNQHSPLMLSPPKKLNLSFNGNDNVSTQHNRLQEEPEKMAQHDITNTELTLLSGMQFKLSRKCEYLLYLLKFIFI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00314926;
- 90% Identity
- iTF_00312367;
- 80% Identity
- -