Basic Information

Insect: Cheilosia scutellata
Gene Symbol: -
Assembly: GCA_955612985.1
Location: OY015313.1:12500210-12503860[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00058 0.068 14.4 0.4 1 23 151 174 151 174 0.97

2 11 2.9 3.5e+02 2.8 0.0 2 23 190 210 189 210 0.85

3 11 0.029 3.4 9.1 3.3 2 23 317 337 316 337 0.97

4 11 0.00076 0.089 14.0 1.2 1 23 343 366 343 366 0.96

5 11 0.00031 0.037 15.2 1.9 1 23 426 448 426 448 0.95

6 11 7.1e-08 8.3e-06 26.7 1.0 3 23 460 480 458 480 0.97

7 11 2.4e-05 0.0028 18.8 1.8 1 23 487 509 487 509 0.99

8 11 1.2e-05 0.0014 19.7 0.7 2 23 515 536 514 536 0.96

9 11 0.00078 0.091 14.0 1.7 1 20 542 561 542 564 0.93

10 11 0.0019 0.22 12.8 0.2 2 19 570 587 569 589 0.95

11 11 2.2e-05 0.0025 18.9 0.3 1 23 596 619 596 619 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00058	0.068	14.4	0.4	1	23	151	174	151	174	0.97
2	11	2.9	3.5e+02	2.8	0.0	2	23	190	210	189	210	0.85
3	11	0.029	3.4	9.1	3.3	2	23	317	337	316	337	0.97
4	11	0.00076	0.089	14.0	1.2	1	23	343	366	343	366	0.96
5	11	0.00031	0.037	15.2	1.9	1	23	426	448	426	448	0.95
6	11	7.1e-08	8.3e-06	26.7	1.0	3	23	460	480	458	480	0.97
7	11	2.4e-05	0.0028	18.8	1.8	1	23	487	509	487	509	0.99
8	11	1.2e-05	0.0014	19.7	0.7	2	23	515	536	514	536	0.96
9	11	0.00078	0.091	14.0	1.7	1	20	542	561	542	564	0.93
10	11	0.0019	0.22	12.8	0.2	2	19	570	587	569	589	0.95
11	11	2.2e-05	0.0025	18.9	0.3	1	23	596	619	596	619	0.98

Sequence Information

Coding Sequence: ATGTTTGGCGCATTGCCAATATGTAGAGTGTGTTTAAAAACATCACTCGAATATATTGATTTCGATACGCCTTTTGAAGTTGAATCAAGCAAAGAAGTCGGGAACGACCTCACATATCTGGATTGTTTTGTGGCATGCACCCGTCTCGAAATTGAACTGACTGAAAATTGTCCTCAGAGTTTGTGTAGCTCGTGTGGTATGGAATTAAAGGTCGCCTATGAGTTCCTACAGAAAGCCGAGTCCGCTGATAGGGCGCTACGTGAATTCGCCGTAAATACAAAACTCGAGAAACCCGACGAGGAGCATCAGGAAAACGCCAATGTTCATTTAGATGAACATAATGAGGTTTATAACTTTGAAAGTCGAGACATCTCTAGACAGGATGATTTCAATGATGCCGACAACGAAACTTATGAACAAATTGATACTCAATTAGAAGACGAGAAAAGTTATGTATGCACGATTTGCGGcgaacaatttttttcacaatTCGTTCTTAACTTACATGTTAACCGATCACACTGCAACGAAAATGCCGAGGATGCTAAGACCTCTGTTGAAAAAGTCGAATGTCAAATCTGTGAAATTGTCATACCATTGGCTAAGTTGAACTCTCATATGCAACTGCACGATGAAGCAAATAGCTTGGATTTTGAATCTGGTTCCAACTTTGCTGCAGGCAACAACGATGAACAACTGATAGACGTTGGTGGAGATGCAGACTTTGAATTATTAGAAATGACTGGAGAGTCCATTGCAGAGACAAGCCCAATGGGCGAGtcacaagaagaagaagactgCCCAACAGCACCAGAAAATGATGAGCAAAATCCCGAAGAAGACGATAAAGACGATGACAATGATCTAAAAATTGATCAAAAATTTTCTTTAATAGAAAGAATCTTGACGGATAAGGAGAAAGCCCATGTGACAAAGCCAAATTACAAGCGTTGCAACATCTGCTACCGACACGTGAGAAAGTCTTCATTCGAGACCCATATGAATATACACAATGATATCCGTCAATTTGCATGCGATCATTGTCCTGGCGAATTCTTTACCAAAAGATCGCTTCAAAAACACGCCAAAATGGCGCACAACGAGCAGTTGAAATCTGTTTGCCGAATATGTCAGGAAAAGGTGGATGGTGTAGATATGAAAACGCACATTCAAGAACAACATTTACGGACCGTTAAGTGTCCTCAATGCGATTATCAGGGCCAAGAGTTGAAAATGAAGGAGCACGTAAAACGACGCCATGCACAGTCGAAGGACTTCCTGTGCAATGTGTGCTCTAAAACCTTTTGTACGCTTGGTGTGCTCAATGCACATTTAAAGTACCACGAACGCAAAGAATCGAAAGTGAAGTCTGACGCATGCGAAATATGTGGCAAAGTATTTTCAACCAATCACTACCTAAAATCGCATATGCTTACGCATCGGGACGAGCGTGAATTATTCCAATGCAACAATTGCGAAAAGTCTTATCATTCGAAAGCCGCTTTGGACAATCACATACGAATGCACAAAGGCGATACAATCAAGTGTGTCCTATGTTCAAAGCAATTCGCAAGGCAATACGAACTTAATGTTCACATGCGTTTCCACACCAAAGAGTATCCTTTCGAATGCGAGTTGTGTCGCAAAAAGTTCGCCATTAAAGGTCACCTAAGGACACACATGTGGCGTCACCAAGGCCTTAAGCTGCAATGTGAAGAATGTGGCAAGCTCTTTACTTCCACTAAAGCACTGCAAGAGCACTCCTTCTGCCATTCTGAGATGCCGTTCCCATGTCCGTACTGCTCGAAAGCGTACCCTTCGAAACCGAAattcaAAGTACATTTGAAAACTGCTCATATGGTGGAATTTTCTAATGACGAATTGCAGAAAATGAGCAAATTCCCCCTTCCAAAACGGTCTAGATCAAAGAAGTTTACTCTAGTTCAAGCTGATACCGTTATGAAAGAGGTTGAAATTCGATCTAAAGAGGAAGAAGAAGAGCgtacataa
Protein Sequence: MFGALPICRVCLKTSLEYIDFDTPFEVESSKEVGNDLTYLDCFVACTRLEIELTENCPQSLCSSCGMELKVAYEFLQKAESADRALREFAVNTKLEKPDEEHQENANVHLDEHNEVYNFESRDISRQDDFNDADNETYEQIDTQLEDEKSYVCTICGEQFFSQFVLNLHVNRSHCNENAEDAKTSVEKVECQICEIVIPLAKLNSHMQLHDEANSLDFESGSNFAAGNNDEQLIDVGGDADFELLEMTGESIAETSPMGESQEEEDCPTAPENDEQNPEEDDKDDDNDLKIDQKFSLIERILTDKEKAHVTKPNYKRCNICYRHVRKSSFETHMNIHNDIRQFACDHCPGEFFTKRSLQKHAKMAHNEQLKSVCRICQEKVDGVDMKTHIQEQHLRTVKCPQCDYQGQELKMKEHVKRRHAQSKDFLCNVCSKTFCTLGVLNAHLKYHERKESKVKSDACEICGKVFSTNHYLKSHMLTHRDERELFQCNNCEKSYHSKAALDNHIRMHKGDTIKCVLCSKQFARQYELNVHMRFHTKEYPFECELCRKKFAIKGHLRTHMWRHQGLKLQCEECGKLFTSTKALQEHSFCHSEMPFPCPYCSKAYPSKPKFKVHLKTAHMVEFSNDELQKMSKFPLPKRSRSKKFTLVQADTVMKEVEIRSKEEEEERT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00315423;
90% Identity: iTF_00313712;
80% Identity: -