Cscu001128.1
Basic Information
- Insect
- Cheilosia scutellata
- Gene Symbol
- clz9
- Assembly
- GCA_955612985.1
- Location
- OY015311.1:21640949-21643470[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-08 3.5e-05 24.2 0.0 3 39 22 59 21 62 0.89 2 2 7.7 5.6e+03 -2.1 0.0 23 32 556 565 551 569 0.82
Sequence Information
- Coding Sequence
- ATGACGCGGGCAAATGAGAAGCATGCTAAGGACAAGAAAAAACGCTGTATTCTATATAATGGAACAGATTTAGAACAAGCCTTATTTGAAATCCGTGAAAATAAACTGCCAATCAGGGCAGCGGCAAGAAGGTTTAGGATTCCAAGGACGACTCTTCAGGACCGAATTCACCAAAGAACAGCCGATAACATTGGGAAATTTGGACCCTGCCCTGTGCTCTCtgcagaagaagaaaataagattaaaaACTGGCTTATAAATTTAGCGAAATGCGGCTTTCCTCAAACCTGCGAAAACCTGTTGAAAACGGTGCAGGATATTCTCCAAGAAGAAGGCCGCAAAACTCCTTTTAAAGACAATAAACCCGGTAAGAAATGGTACTACGGTTTTATGCGACGCCATCCCGATTTAACCTTACGAACCCCGGAAACTGTATCTAAAAGCCGCGCTCAAATAACAGAGGAAGGCATAAGAAAATGGTTTAGAGAGCTCAAAGAATACTTGACGCAAGAAGATTCTTTAGACATTCTTGAGGATTCTTCTAGAATCTTTAATGCCGACGAAACGGGATTCAGTATGGCTCCAAAAACTGGAAATGTCATTGCGCCAAAAGGAATTAAAAACCTTTATGAAGTCAAGGCAGCAAATGAAAAAGAGAATTTAACTGTTCTTATGACTTTTTCAGCAGATGGAAGAACACTTCCTCCTATGGTGGTTTTGCCTTACAAACGATCTCCCAACTGGCTGAAATCAGTCCAAAGTAAGAAGCCTGAATGGGTTTTTGGCAAGACGGAGAGCGGATGGATGCGGGGAGAAACTTTTCTCCAATATGTGAAAGAAGGTCTTAACGTTTGGATTTCCAAAAATGATGTTAAACGTCCAGTTCTTTTTTTCGTCGATGGACACGCTTCCCACATGTCCCTTGAACTAAGTGACTTTTGCAGCAGCGAAAACATAATTTTATATGCACTTCCTCCAAACACGACCCATATCCTTCAGCCGGCGGATGTAGGTGCTTTTAAAGGTTTAAAGTcggattataaaaatattttaaacgaaTGGCGCAAACGTTCGGGTAGTCACGGCAGCACGATCAACAAAGAGAGTTTTTGTGATGTGTTAGACGAGCTCCTGAATTATAAGGACAGGACGACCATCATAcaaaatgctttcaaaaaatGCGGACTCTTTCCATTCGATCCAAATGCCGTTGACTATTCGAAATGCATCAAAAATGCGCTAGAAGCTTTAAATGCTAGCAATAGTGTTTCCGATATTGGTGATGATGCTGTTAGCGGTTTAAATGTTGGTGATCCTGGTGGTAAATCTGGAGATGGCCGTGACGTTAATACTGGTGGCGATGGGGATTCTGGGGGCAATCTTGGTACTGATCCTGGTCGCGTGTCTGTTCGCAGTCCTGTGAATGATGCTGGTTATTTGGATTTTGATGTAGATGGTGATCTTGGGAATGGACTCAACGAGGATTTTGTGGTCAACTTCGATTGCGATACAGGCCGCATTGTGGATGTTGGTGATGGTAATGCTAAAGATATTACACACGCAAGTTTTCTAGAGGCCGAAAAAGTAGTACTTCACTTAAAAGATGATCTCCAAAATAGTAATATCGATCATAGGGTTGTGCTTGATGTTATTCGTCAggctaaacaaaaaatgtttggcGTTTCTCAAAGTACCCAAGTTATTGAAGGGATTTACGAAGTTACCTGCGATGGCACATTGTTAAGAATACCTCAACCCAATGGAGGCATTGTTCAAGAAGCTTCCTTACCAGATAATAGTCCAAACGATTGGGAAGCACTCATAGATACCATGGAGCTGGAAATACGAAATGAAAGAAATGATTCATCCGAGGTGAATGCTAGTATATTACAAGAAATTTCTTCCCATATTATGGAGGAAAATACACCAACCACAATTCATGCTGAGCTGAAAGACTTTATTTGTCCAAACTGtgataaaaaatga
- Protein Sequence
- MTRANEKHAKDKKKRCILYNGTDLEQALFEIRENKLPIRAAARRFRIPRTTLQDRIHQRTADNIGKFGPCPVLSAEEENKIKNWLINLAKCGFPQTCENLLKTVQDILQEEGRKTPFKDNKPGKKWYYGFMRRHPDLTLRTPETVSKSRAQITEEGIRKWFRELKEYLTQEDSLDILEDSSRIFNADETGFSMAPKTGNVIAPKGIKNLYEVKAANEKENLTVLMTFSADGRTLPPMVVLPYKRSPNWLKSVQSKKPEWVFGKTESGWMRGETFLQYVKEGLNVWISKNDVKRPVLFFVDGHASHMSLELSDFCSSENIILYALPPNTTHILQPADVGAFKGLKSDYKNILNEWRKRSGSHGSTINKESFCDVLDELLNYKDRTTIIQNAFKKCGLFPFDPNAVDYSKCIKNALEALNASNSVSDIGDDAVSGLNVGDPGGKSGDGRDVNTGGDGDSGGNLGTDPGRVSVRSPVNDAGYLDFDVDGDLGNGLNEDFVVNFDCDTGRIVDVGDGNAKDITHASFLEAEKVVLHLKDDLQNSNIDHRVVLDVIRQAKQKMFGVSQSTQVIEGIYEVTCDGTLLRIPQPNGGIVQEASLPDNSPNDWEALIDTMELEIRNERNDSSEVNASILQEISSHIMEENTPTTIHAELKDFICPNCDKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01299942;
- 90% Identity
- iTF_00312533;
- 80% Identity
- -