Basic Information

Insect: Cheilosia pagana
Gene Symbol: -
Assembly: GCA_936435595.1
Location: CAKZFE010000017.1:11762028-11765236[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00029 0.026 15.2 1.1 2 23 387 408 386 408 0.97

2 16 0.00024 0.021 15.5 2.7 1 23 414 436 414 436 0.97

3 16 0.4 36 5.3 0.0 1 17 442 458 442 459 0.93

4 16 3.5e-05 0.0031 18.1 3.5 1 23 476 498 476 498 0.98

5 16 5.2e-05 0.0047 17.6 0.2 1 23 531 553 531 553 0.97

6 16 7.4e-05 0.0067 17.1 1.8 1 23 559 581 559 581 0.98

7 16 8.1e-06 0.00073 20.1 1.0 2 23 691 712 690 712 0.97

8 16 4.7e-06 0.00042 20.9 3.1 1 23 718 740 718 740 0.98

9 16 1.1e-05 0.001 19.7 0.2 1 23 746 769 746 769 0.98

10 16 0.00024 0.022 15.5 1.1 1 23 780 802 780 802 0.98

11 16 6.8e-06 0.00061 20.3 1.3 1 23 814 836 814 836 0.98

12 16 0.017 1.5 9.7 2.0 1 23 842 864 842 864 0.97

13 16 0.00012 0.011 16.4 0.6 2 23 870 892 869 892 0.95

14 16 0.0028 0.25 12.1 0.2 1 23 900 923 900 923 0.96

15 16 0.00066 0.059 14.1 0.5 3 23 933 954 932 954 0.93

16 16 0.00075 0.067 13.9 0.8 2 23 960 981 959 981 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00029	0.026	15.2	1.1	2	23	387	408	386	408	0.97
2	16	0.00024	0.021	15.5	2.7	1	23	414	436	414	436	0.97
3	16	0.4	36	5.3	0.0	1	17	442	458	442	459	0.93
4	16	3.5e-05	0.0031	18.1	3.5	1	23	476	498	476	498	0.98
5	16	5.2e-05	0.0047	17.6	0.2	1	23	531	553	531	553	0.97
6	16	7.4e-05	0.0067	17.1	1.8	1	23	559	581	559	581	0.98
7	16	8.1e-06	0.00073	20.1	1.0	2	23	691	712	690	712	0.97
8	16	4.7e-06	0.00042	20.9	3.1	1	23	718	740	718	740	0.98
9	16	1.1e-05	0.001	19.7	0.2	1	23	746	769	746	769	0.98
10	16	0.00024	0.022	15.5	1.1	1	23	780	802	780	802	0.98
11	16	6.8e-06	0.00061	20.3	1.3	1	23	814	836	814	836	0.98
12	16	0.017	1.5	9.7	2.0	1	23	842	864	842	864	0.97
13	16	0.00012	0.011	16.4	0.6	2	23	870	892	869	892	0.95
14	16	0.0028	0.25	12.1	0.2	1	23	900	923	900	923	0.96
15	16	0.00066	0.059	14.1	0.5	3	23	933	954	932	954	0.93
16	16	0.00075	0.067	13.9	0.8	2	23	960	981	959	981	0.96

Sequence Information

Coding Sequence: ATGTCTGTCAAGTTGGACGACACAGTGTGCCGCGTATGTTTAAGCTCCTTTGGCAACATACCAATCTTCGATGGATGCGGCAAAGATGATCAATTTCGATACTGCACTTCCTTGGAGGCGAACGTGGACGATGGACTGCCGTCTAAGCTTTGCAAGAAGTGCAACGATCATTTGAAGGTTGCCTATGACTTTCGATTTCAGGCAATTTATGCCGAGAAATATTTCAGGAAGACAATATTTTTGCCTTCTTTCAAAAAGGAAGATGCCGAGGCGACTGGAGATATCTCGGATGTGCGCAATTGTACCGATGAATTGGACGAGAATATGGCAGAGATTGATATGTTGCTGGCAATACACACTGAAACCGTTGATGAGGGTGATGAAGACAATGACGATATGAATAATTCTGCTTACTACGATGATGAAGAGAGTGTCGATGAGACCAGAAAGCACGTTGAAATCATCGGCATGGAAACTTTTGAGAAGGAGCAGCGAGAACAGAAGGATCAGAAAGTTAAAATTGAATTAGCTACTGTCCCTCCACCTCTTGTGTCATCAACTGTCAGTATGCCGAATACTGTATTAGGCATACCGACGGAATCAACACAACCTACAGCAACAAGCAATAATACGATTCCTAATGTAGACATAAATGCCTTACAACAGTATACAACGTCAAGTCCCTTCTCCACACAATCGGTGCAAGATGTGCAGATCCACCATGGAACAGGAACATCCCTCGAACTAGAGATTATCCCAATCATGAAGAATGATCCCACCACGTATGACTTTAGTACTGCAGCTACAGTTAACGACGCCTACGATGCATATAATGCTCCGGCGCAAATCCAGTACCAACAGCCTATGGCCATGCACCTGCAATATGAGCAACCAACCGTGACATTGCCCTTGCAggaatctgtttctgtttcagacCACTATGAGTTCCCGTATCAACCACAGTTCCCTACGTACACCGCCCAAACAATCGAAATAAGACCTGCAAATGAGACAATTTCTCCAGCTCAGCAGGAGCAACCAAATCAGATTATTACAATTGTTTCAACTGAAACTCAACTCGATGCCACCGCCCCAAAGACTGAAAATCTGAACCCCAAACCTAAAAAGGCTAAGCGTGAAGGACGCAGGGACAAGATCGAGTGTCAAATCTGTGGAAGCATCTTCACGCATTTGAACTCGCTGAAGACGCATCTCCTTAAGCACTCTGGCGAAAAACCATTCCACTGTGAGTTTTGCAATAAGGCGTTCGCCAGAAAGACCGTCCTCAATATCCACCGACGTCTTCACACTGGAGAGAAACCCTATCAATGCCCCCTTTGCTCGAGCGCCTATGTAACTAAGGAAGCCCTAACTGCAAATCACGAACAGGAAGTGGGTGCCAACTTCCGCAAGGACAAGGTTTCCTACATCTGCTCCATATGCAACAAGTCGCGCTGTTCTAAGTACTCGCTAGCGTCGCACATGAAGACACATTCGAACGATGCAAAGGCCCGACGCAAGATGGTTCgacgaaaaaaggaaaaatccgGCGGCAACAATAGCACCGCGGCTAACAGTGCTCCGCTCAAGTACTCGTGCAAGATCTGCCAGAAAGGTTTCCCCAACAAGTGGGAACTTAGTACTCACGCCGAGTCTCATGACATGCACAAGACGTTCGAGTGCGACGTCTGTCAGCGAACATTCGAAAAGAAGTTTCAGTTGCTGTACCACCTGCAGACGCACGATGGTGGTGATGAGCTGGTAAAAGCGAAGGTGCAACCAACGGttgaaaaacgaaaacgttCCGATGAAGAAACAGAGAAGTCGGAGCAAAAGCAACTGCCACCCggaaaaaaaccgaaaagaCTCTCGCCGAGGAAGCGACGGAAAAGGAACgcgaaaaggaaaaatattgcCTCCGACGAGGCAGATGAAGCACAGGAGGGAGAAGAAAACGACGATGAAGATGACAAGGACTTTGAGCTTGTAAAAGCAGACAAGGACACAAAGAAGAGGACAAATCGTGCACAGCGCGAGAACCTCAGAGCCCTACGCGCGGGTAGTAAAATTGAATGTCACATATGCGAGGCTGTGTTTACGCATCCGACATCGCTGAAAACGCACATGTTGGTGCACTCAGGCGAGCGCCCATTCAAGTGCGACCATTGCGATAAGTCATTTGCAAGGaaaactgttctaaatattCACCGAAGGTTGCACACTGGAGAGAAGCCCTACAAGTGTCCGCTTTGTGATAGTGCCTACGTCACCAAGGATGCTCTAATGCGCCACATGTCCAAGGACCACGACGATGACAGAGAAGCCGATCGAATTAAGTTCACCTGCGGCATCTGCCACAAGGCGATGGGCTCCAAGTACTCACTGCAAGCCCATATGAAACTGCACGAGCAGAACTCAACGGCGGAGATGGAAATTAAGTTCTCGTGTAATACTTGCTCTGAATCCTTTGACAGCAAGTCCGACTACACCAAGCACATGGAAGTGCATGAATCTAACCGCAATTTCCAATGTGACATCTGCCAGGTCACATTCGAGAAGAAATTCAAACTGCTCTTCCATTTGCAGACGCACAAGATCGAAGACCTGCCCTGCAAAAAGTGTAAGGAGACATTCACGATAAGaGAGAACCTTATTCAACACATAAAGTTGCAGCATATGGGCCCTCGAAATATGGACTTTCAGTGTCCGCAGTGCAATATGGGACTGTACGACACCCGTGATCTGAAACTCCACATGTTGAATGCACACGATGTGAGTATGGGCTCCCTAAACGCCTGCGATCTGTGCGGAGAGAGCTATTCTACAGCCGCTCAATATTATAAACACATGCATGACAAACATGACACAATCAGCAAAACATGCAACGAATGTGACAAGTACTTCGATTCGAGGAAAGCCTTTGATAAGCACATACTGGCACACTACATGTAA
Protein Sequence: MSVKLDDTVCRVCLSSFGNIPIFDGCGKDDQFRYCTSLEANVDDGLPSKLCKKCNDHLKVAYDFRFQAIYAEKYFRKTIFLPSFKKEDAEATGDISDVRNCTDELDENMAEIDMLLAIHTETVDEGDEDNDDMNNSAYYDDEESVDETRKHVEIIGMETFEKEQREQKDQKVKIELATVPPPLVSSTVSMPNTVLGIPTESTQPTATSNNTIPNVDINALQQYTTSSPFSTQSVQDVQIHHGTGTSLELEIIPIMKNDPTTYDFSTAATVNDAYDAYNAPAQIQYQQPMAMHLQYEQPTVTLPLQESVSVSDHYEFPYQPQFPTYTAQTIEIRPANETISPAQQEQPNQIITIVSTETQLDATAPKTENLNPKPKKAKREGRRDKIECQICGSIFTHLNSLKTHLLKHSGEKPFHCEFCNKAFARKTVLNIHRRLHTGEKPYQCPLCSSAYVTKEALTANHEQEVGANFRKDKVSYICSICNKSRCSKYSLASHMKTHSNDAKARRKMVRRKKEKSGGNNSTAANSAPLKYSCKICQKGFPNKWELSTHAESHDMHKTFECDVCQRTFEKKFQLLYHLQTHDGGDELVKAKVQPTVEKRKRSDEETEKSEQKQLPPGKKPKRLSPRKRRKRNAKRKNIASDEADEAQEGEENDDEDDKDFELVKADKDTKKRTNRAQRENLRALRAGSKIECHICEAVFTHPTSLKTHMLVHSGERPFKCDHCDKSFARKTVLNIHRRLHTGEKPYKCPLCDSAYVTKDALMRHMSKDHDDDREADRIKFTCGICHKAMGSKYSLQAHMKLHEQNSTAEMEIKFSCNTCSESFDSKSDYTKHMEVHESNRNFQCDICQVTFEKKFKLLFHLQTHKIEDLPCKKCKETFTIRENLIQHIKLQHMGPRNMDFQCPQCNMGLYDTRDLKLHMLNAHDVSMGSLNACDLCGESYSTAAQYYKHMHDKHDTISKTCNECDKYFDSRKAFDKHILAHYM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00313679;
90% Identity: -
80% Identity: -