Cgro004125.1
Basic Information
- Insect
- Cheilosia grossa
- Gene Symbol
- grn
- Assembly
- GCA_963082955.1
- Location
- OY720144.1:52253134-52291415[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-19 5.4e-16 58.3 4.7 1 35 281 314 281 315 0.98 2 2 4.8e-19 1.6e-15 56.7 5.5 1 35 338 371 338 372 0.97
Sequence Information
- Coding Sequence
- ATGATTGTTGAAATCGTCGATCCGTTGATTTACTTGCGCAACTTGGCTCTGGCAATCTGTGGCAAAGCTTCTCGAATGCCATCGTCACATACAGCGCCTCAGGTATGCCGACCACACTTTCATACGCCCTTGAGTCCGTGGCTAACCAGCGATCATAAATCATTTCCGCCTGGCAGTCCGTGGGGTAGTCCGTTTGCGTGTCCACAGGATCCGCAGGACAAGGTTGGCGGCCAATTACAAAGCCATCAAACGGGCCAGCATTCATTTCCATTCCCTCCAACACCGCCAAAGGATTCAACGCCCGATTCAGTACAAACAGGCCCATCCGAATATCAGGCTGCTGTGAACGCTTTTATGCACCAGGCACAGGCATCAACTACCTCACTAAACGATGCGAGTTGCGCTTTGGATATAAAGCCGACGATACCAAACGGTAGTGGCGGCGGTGGAGGTGGTACAAATCAAGTTCCTGCGCCAAAACAACGCGAAGGTACGAATGCGGGTAACAGTAATAGCAATAACAACAATACTAGCAGCAATAATCACAATTCGCATACGGCTGCGAATAAtgcaagcaacaacaacaacaattcaGCGTTGAATGGCACCAGCAGCCTATTCGATAGTACACAAGCTGCATACGGGGTAGGTGGCGGTGGAGGTGGAAGCAGTGTTGGGTATGAGCCCAGCTATGCTGCAGCGTatcaccatcatcaccatcaccactCACACCATCAGGCGACTGGAATGTTTCAAACAGCTGCCAGGCAAGCGGGTATGAGCAGCACGGATGTGAAGCCACAAAGGACGAAGCCACGCACAAGTGCCGAAGGCCGAGAGTGCGTGAATTGTGGCGCCACATCAACGCCACTTTGGCGAAGGGACGGCACCGGACACTATCTGTGCAACGCATGCGGACTGTATTACAAAATGAATGGACAGAATAGACCACTGATTAAGCCAAAGCGAAGACTGTCGCTGCAGAGCGCGGCCAAGCGTGCGGGGACATCCTGTGCGAATTGcaaaaccacaacaacaaccctTTGGCGGCGGAACGCCAGCGGTGAACCAGTGTGCAATGCCTGCGGTCTTTATTTTAAGCTTCACAACGTTAATCGTCCTCTAACAATGAAGAAGGAGGGTATTCAGACGAGAAATCGAAAGCTGTCGTCTAAGTCAAAGAAGAAGAAGGGGCTTGGTGGTGCATGCCTTCCTATTGGTAGTCATTTGGGAATGAGCGATTTGATGAAGCCATTGGATCCGTCGAAAGGCTTCGGAGGTGGATTTTCTGCGTCAATGGgACAACATGGACACCTATCCGGCGGTTTGCATCCAGCCCATGCACATATGCACGGTGGATGGTACGCCAGCGGAATGGGTGCGCTGAGTGCCTCCAGTGGATTACAAGGAGGCTTTTCCACAGCGGGCTCATTAGGAGGAGGTGTTGTGCCTCACTCGCAGTCATACCACTTAGGACTTAGCTCGATGGTAAGTTGA
- Protein Sequence
- MIVEIVDPLIYLRNLALAICGKASRMPSSHTAPQVCRPHFHTPLSPWLTSDHKSFPPGSPWGSPFACPQDPQDKVGGQLQSHQTGQHSFPFPPTPPKDSTPDSVQTGPSEYQAAVNAFMHQAQASTTSLNDASCALDIKPTIPNGSGGGGGGTNQVPAPKQREGTNAGNSNSNNNNTSSNNHNSHTAANNASNNNNNSALNGTSSLFDSTQAAYGVGGGGGGSSVGYEPSYAAAYHHHHHHHSHHQATGMFQTAARQAGMSSTDVKPQRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYFKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGACLPIGSHLGMSDLMKPLDPSKGFGGGFSASMGQHGHLSGGLHPAHAHMHGGWYASGMGALSASSGLQGGFSTAGSLGGGVVPHSQSYHLGLSSMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01045129;
- 90% Identity
- iTF_01542595;
- 80% Identity
- -