Basic Information

Insect: Cheilosia grossa
Gene Symbol: salm
Assembly: GCA_963082955.1
Location: OY720147.1:10660236-10671091[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.8e-06 0.00018 22.1 1.7 1 23 282 304 282 304 0.98

2 9 2e-06 0.0002 22.0 1.7 1 23 310 332 310 332 0.98

3 9 1.8 1.7e+02 3.3 2.5 5 23 552 570 549 570 0.85

4 9 1e-07 9.9e-06 26.1 0.2 1 23 576 598 576 598 0.98

5 9 0.0008 0.079 13.8 0.9 1 23 608 630 608 630 0.98

6 9 0.00081 0.08 13.8 0.2 3 23 785 805 784 805 0.98

7 9 0.00093 0.092 13.6 4.5 1 23 811 833 811 833 0.97

8 9 4.3e-06 0.00043 21.0 3.0 1 23 950 972 950 972 0.96

9 9 6.9e-08 6.8e-06 26.6 0.7 1 23 978 1000 978 1000 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.8e-06	0.00018	22.1	1.7	1	23	282	304	282	304	0.98
2	9	2e-06	0.0002	22.0	1.7	1	23	310	332	310	332	0.98
3	9	1.8	1.7e+02	3.3	2.5	5	23	552	570	549	570	0.85
4	9	1e-07	9.9e-06	26.1	0.2	1	23	576	598	576	598	0.98
5	9	0.0008	0.079	13.8	0.9	1	23	608	630	608	630	0.98
6	9	0.00081	0.08	13.8	0.2	3	23	785	805	784	805	0.98
7	9	0.00093	0.092	13.6	4.5	1	23	811	833	811	833	0.97
8	9	4.3e-06	0.00043	21.0	3.0	1	23	950	972	950	972	0.96
9	9	6.9e-08	6.8e-06	26.6	0.7	1	23	978	1000	978	1000	0.98

Sequence Information

Coding Sequence: ATGTGCTCGATATTTCACAACCGAATTAATTACCGAGGTCCTAGGAGTTCGAACGGTACTGGTGGGGGCAATGAGGCATCATCCATCAAAGATGACCCAGATCGGAATAACAACAGTGGTGGTGACGGCCCAGATCCTACGCTTCATATGCACCAGAGTGACGGCGAGGAGGACGACGAAGAGGAGAGTGTAGAGGAGGCATTGGACTTATCAGTGATGCCGCGTTTGCCGGCGACAGGACATGTGGCCCTTGAAGCGTTGCAGCACACGAAAGTGGCTGTGGCGCAATTCGCCGCCACGGCCATAGCAAACTCGCAGAACTATGACGAAGCAGTGAGTGATCTAGCTGTTGTGCAATCGACGATATTCAATGTGCAGCGTCAGCAGCTGATGCAGATGCAGCTGATACAGCACCTGCAGTCGCAACTTAAGCACCGCGCCGAAGAAGACTATGACGATGAGGACGATGATGACGACCGGGAGGAGGAAATACTTATAAtgaaggaggaggaggatgaTGGCTTGATACCTCGCCAGAGCATCGACCACATCCCAGAGAAAGAAAAGACTGAAATAAAAGAGGAAGAGAAACCGAGTGAGGAGCAGGAGTGCACCAAGGCATTCCAACCGCACCTGTGTGACATCAGTTCGTCATTTGCCTCGAGCATTATCACCAATCACGATCCGCCACCGCTGCCCAATGCACCGAATTGTCTAGAAATGCTGCAGCGACGGACCGAGGAGGTTCTCGACTCGGCCTCGCAGAGCGTGCATGCAAACCAACTCAACGATGAGTACGATTACTCGAAGAAGGATGGCCAGGGTAGGGGGGAGATCTTCAAACATCGCTGCAAGTACTGTGGGAAAATATTCGGTTCATATTCAGCTCTGCAAATTCACCTGCGATCGCATACCGGAGAGAGGCCCTTTCAGTGCAATGTCTGCGGCAGTAAGTTCACAACCAAGGGCAACCTGAAGGTTCACTATCAGAGACATACTCAGATATTCCCTCCCATGCTTATGCCGCCTTCCCACAATGCTCAACAATACCCGCAATATCATCATCCAGGTATGGGGGCGCCTGGAGATCCACCTCTGCGTCTGCCGTTTCCCCCGTTCGTTCAAACACCGCCATTCCGCGTGCACACCTCTCCGATCCGAGACAAAGAGCCACAGCCGATTGAAAAAGTGCCGCAACTACAGCCAGAACCACAATCTCAACCAGAGCCCCAACCACAGACTGAGGCGCAAGATCTTCGAAAGGCGGTCACCGAAGTTGCAGACCGAACACATCCCATCGTTGAGACACCAAAGAAAGAACCACCCATGCGGCAAGAAACCCTCATCCCTCCTCCGAGCATTCGTCGAAAGCGGACATCCAGCCCCCGAGAGTCACATGCCCCACCATCAAGGCTTAGCGATGAAAATGTTCCCGAAAACCTCTCCAAGTCATCGCGGCGTTCATCGCTTAGCAGGGGATCGGCAACAAGCCTTGAGCCAATACCCTCCGAGTATTCACTCGCCCAGATGGAACGCCTGATCGACAAGTCCTGGGAAGACCTCATCGAGATCGATAAAACCTCAGAGACATCAAAACTGCAACAGCTTGTGgataatattgaaaataagcTCACCGATCCGAATCAGTGTATTTTCTGCCAGAAAGTCATGTCCTGTCGCAGTTCCTTGCAGATGCATATACGTACCCATACCGGCGAGAGACCATTTCGGTGCCGAATCTGTGGACGGGCCTTCGCCACAAAGGGCAACCTAAAGGCCCACATGAGCATTCACAAAATCAAACCTCCAATGCGTAGTCAATTCAAGTGTCCCGTTTGCCACCAGAAATTCTCAAACGGCATCATCTTGCAGCAACACATTCGGATACATACCTTGGACGACGGGGATGGTGATCGAGCGAAATATAGCGAGATGTCTTTGGTCAATGCTGAGGATCAGAGTTCCACGCGTTCGATAAGCACTTCGGACAACATGGACTTCTCACAGTCCGAGTACTCTGGACAGAGGTCGGAATCGTCGCAGGGTGACTTCGACGATTTCACAATGGCCAGCGAGGAAGAGTCTCCAACGGAAGCGAACAGTGACGGCCGCAGGGAAGACAAGGAGCCAATCGATGAATCTGAGGGTGCGAGCAATTCGGATGAGAACGGTGCAATGGACTTGTCGGCGAAAAGTGCCGACAGTGAAACAGTGAGTTCGGAGAATACCGGCGTTAGTTTAGTGCCGAATTTTCTTCTAATGCCGCGAGACAATCGAAGTCCACCGAAGTTTCCGATACTGCCATTTGGACCGCTGAGGATTATTGCTGGTCTTCGTGGCACGACAAACATCTGCAACATTTGTTTTCGCATCTTTCCCAACACAACCGAACTGGACCTTCACATTCGAACTCATACCAAAGAGGATAACTTCAAGTGCTCCATCTGTGATAAAGGCTGCGCCACAAAAGAGGAATTCCATCATCATATATTGGCACACAGATTTCGCCGAGATTCTGGAGACTCCAGTCATAATCAAAACTCCTCCAATTTTTCCAATGACGAAATACATCTAGAAGCGAGTCACAGGACTTTCAAAACTGAGTTGAATACAAACGATAATCAAATACCACTGTCACCGAATGGAGGCTCATCGTCGACAATCACCTCCGACAACAATATCGGAGGCGATGCTGAACATTCCCTAATGAAGATGAAACTTCTATCTTCGCTACCCAATGAGTCACACGTGCAGTCGTCTTCGGAAACAACTCGATACACTCCGAACTCAGTGCTGAAACAACAAGAGCTCCAGCAAAACGCCCAAGAACAACCGGCGAACAACAAACACTTCTGCACGGTTTGTCGAAGAAATTTCAGTTCTAGCTCAGCGTTGCAGATACACATGCGAACTCATACAGGAGACAAGCCATTTCAGTGCAATGTGTGTCAGAAGGCCTTCACCACTAAGGGAAATCTGAAGGTTCATATGGGCACCCATATGTGGACAAACCCAGCCTCGAGACGTGGCCGCCGCATGTCGCTAGAACTTCCTATGCATAGGCCAAACCTGCCACCGTTAGGTACGCATCAAGACTCTGAACTCCTATCCCGTCGGCCGGAGATATTCTTCCCTTATTTACCGCCATTTTTCAATGGTCTACAACCAAAGCCTGTCGATCTACCATCAGGATCATTTCCGGGTCTCCCACCACCCCCTTTCCCCAATGGTAGTGCCCAGAAATATTCCGATCTAATGGGATTCTCTCCGTTCCTTGGACCACCCTATAACTTCCCTCCACTACCAAATTTAGATCAAATTACCAAATCACCCGTCGACGAGAAACACTCGAGAAGTCCACACGAAAGTCCCACAAATGGACCGTCACATCACCACCAACACTTTAGCAATCAACAATCGCTATCTAAAAAGGACTTTCACCACGATGAATTTGTCAAAGGATGA
Protein Sequence: MCSIFHNRINYRGPRSSNGTGGGNEASSIKDDPDRNNNSGGDGPDPTLHMHQSDGEEDDEEESVEEALDLSVMPRLPATGHVALEALQHTKVAVAQFAATAIANSQNYDEAVSDLAVVQSTIFNVQRQQLMQMQLIQHLQSQLKHRAEEDYDDEDDDDDREEEILIMKEEEDDGLIPRQSIDHIPEKEKTEIKEEEKPSEEQECTKAFQPHLCDISSSFASSIITNHDPPPLPNAPNCLEMLQRRTEEVLDSASQSVHANQLNDEYDYSKKDGQGRGEIFKHRCKYCGKIFGSYSALQIHLRSHTGERPFQCNVCGSKFTTKGNLKVHYQRHTQIFPPMLMPPSHNAQQYPQYHHPGMGAPGDPPLRLPFPPFVQTPPFRVHTSPIRDKEPQPIEKVPQLQPEPQSQPEPQPQTEAQDLRKAVTEVADRTHPIVETPKKEPPMRQETLIPPPSIRRKRTSSPRESHAPPSRLSDENVPENLSKSSRRSSLSRGSATSLEPIPSEYSLAQMERLIDKSWEDLIEIDKTSETSKLQQLVDNIENKLTDPNQCIFCQKVMSCRSSLQMHIRTHTGERPFRCRICGRAFATKGNLKAHMSIHKIKPPMRSQFKCPVCHQKFSNGIILQQHIRIHTLDDGDGDRAKYSEMSLVNAEDQSSTRSISTSDNMDFSQSEYSGQRSESSQGDFDDFTMASEEESPTEANSDGRREDKEPIDESEGASNSDENGAMDLSAKSADSETVSSENTGVSLVPNFLLMPRDNRSPPKFPILPFGPLRIIAGLRGTTNICNICFRIFPNTTELDLHIRTHTKEDNFKCSICDKGCATKEEFHHHILAHRFRRDSGDSSHNQNSSNFSNDEIHLEASHRTFKTELNTNDNQIPLSPNGGSSSTITSDNNIGGDAEHSLMKMKLLSSLPNESHVQSSSETTRYTPNSVLKQQELQQNAQEQPANNKHFCTVCRRNFSSSSALQIHMRTHTGDKPFQCNVCQKAFTTKGNLKVHMGTHMWTNPASRRGRRMSLELPMHRPNLPPLGTHQDSELLSRRPEIFFPYLPPFFNGLQPKPVDLPSGSFPGLPPPPFPNGSAQKYSDLMGFSPFLGPPYNFPPLPNLDQITKSPVDEKHSRSPHESPTNGPSHHHQHFSNQQSLSKKDFHHDEFVKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00389819;
90% Identity: iTF_00312035; iTF_00316218; iTF_00315391; iTF_00313705; iTF_00312872;
80% Identity: -