Basic Information

Insect: Cheilosia grossa
Gene Symbol: -
Assembly: GCA_963082955.1
Location: OY720148.1:6466031-6468652[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.99 97 4.1 0.3 1 12 16 27 16 29 0.91

2 13 0.00013 0.013 16.3 0.2 1 23 325 348 325 348 0.94

3 13 0.31 30 5.7 4.5 1 23 357 379 357 379 0.98

4 13 0.00012 0.012 16.4 4.2 1 23 386 408 386 408 0.98

5 13 7.5e-05 0.0073 17.1 0.4 1 23 414 436 414 436 0.99

6 13 8.8e-05 0.0087 16.8 1.1 1 23 443 465 443 465 0.97

7 13 2.5e-05 0.0025 18.6 0.4 1 23 471 493 471 493 0.97

8 13 7.1e-05 0.007 17.1 0.3 1 23 499 521 499 521 0.98

9 13 7.6e-06 0.00075 20.2 0.3 1 23 527 550 527 550 0.95

10 13 0.00021 0.021 15.6 3.7 1 23 556 579 556 579 0.97

11 13 1.4e-05 0.0014 19.3 3.5 1 23 585 607 585 607 0.98

12 13 0.00033 0.032 15.1 0.4 1 23 613 635 613 635 0.96

13 13 0.00095 0.093 13.6 0.8 1 22 641 662 641 665 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.99	97	4.1	0.3	1	12	16	27	16	29	0.91
2	13	0.00013	0.013	16.3	0.2	1	23	325	348	325	348	0.94
3	13	0.31	30	5.7	4.5	1	23	357	379	357	379	0.98
4	13	0.00012	0.012	16.4	4.2	1	23	386	408	386	408	0.98
5	13	7.5e-05	0.0073	17.1	0.4	1	23	414	436	414	436	0.99
6	13	8.8e-05	0.0087	16.8	1.1	1	23	443	465	443	465	0.97
7	13	2.5e-05	0.0025	18.6	0.4	1	23	471	493	471	493	0.97
8	13	7.1e-05	0.007	17.1	0.3	1	23	499	521	499	521	0.98
9	13	7.6e-06	0.00075	20.2	0.3	1	23	527	550	527	550	0.95
10	13	0.00021	0.021	15.6	3.7	1	23	556	579	556	579	0.97
11	13	1.4e-05	0.0014	19.3	3.5	1	23	585	607	585	607	0.98
12	13	0.00033	0.032	15.1	0.4	1	23	613	635	613	635	0.96
13	13	0.00095	0.093	13.6	0.8	1	22	641	662	641	665	0.92

Sequence Information

Coding Sequence: ATGACGGAAATCATTAGCCAAATTTCAAACTACACGACGGAACTTTTCAAGTGCTTCCTTTGCGATCGAATATTCGCAGATGGCGACGAACCATGGCATTTGTTCGAGAAGAGGCTTCTTGAAAACGGTCAGCAAGATTGTCCGCTGGCCACAATTTTATCATCTGCATTGGGGAAGGAAATCGAACAGGATAATGTCCACTCTAAGTTGCTTTGCGATGAGTGCAATTTAATACTTGTAGAGTATGAGAGTGTAGAGAAGAGATTCTATCAGTTTCGGTTGAAAATTCTGTCGGACTATAATAATACGGCAAAAGAGAATGGACTCGACCCGGTTTGGTTCGAGATAGGCGATGTCGAGGATAGCGCTCAAACGGATTCGCAACTAGTCGAGGAAAGCGAAAGCACATTGAATGTGGAAGAAGTCAAAACCGAACGCGATATGGAGGAGAGTGTTGTTATACCAATGTTGGTTCATCAAGAGATTGATAGTTTTGTGGTGGAGGATGTTCAGGGGCAGTTTCAAGACGGTATTGTTCCAGAATTCGTCACAGAAGGAGTAGCTGTGATTAATGACAATATCCAGGAACAGCACGAGGAGCAGGAATTGGAGGATGCTGCCAGCAGCGCATATGCTGAGCGAAACATACAAATTATGGGAGAAGAAATAACCTACGAGCAGATAATAGAACAGAACTCGGTCATCAGCTACGACAACAGTGTGGATACCGCCGAGTCCGTAATAGGTTACAACAGCAGCATTGACGATGAACCTCCAATACTCCCCGACGACATTCCGAAGCCGCAGAAGCAAAAACGCACATCACGTACAATCAAACGGGAAACCGAAACCGAGCCCATTGACTTTGAATTGGTCGATAACATGTACATCTGTGCACTGTGTCCAGATAAAAGCGAACACGAGCCGATTGTGTTCCCGAATCACTTGAAAAACGTCCACAACTACAAGTTCTACGTGTGCGACATGTGTAACAAGGGGTTTAACAAACGAAGCGAAATCAATGACCACATGGATGAGGCGCACGGTGGCGGAGCAGAGGAAGGAGAGTTTCAGTGTGAAACGTGTCTTCGGGTGTTTTTGAATCATCGCCTGTTTCGTAACCACAAGCGACTGCACTATATTTCGACAAAGCATCATGAATGCTCTGAGTGCCACAAGAAGTACAGCTCGAAAAATCTGCTCGATGAGCACATGAACATGCACACCGGGAAACGTCCCTACAAGTGTGCGTCGTGTGCCAAGGACTTTGCGTCGAAATATACCCTGCAAGCGCACTTGAAGATCCATACGAAGCGACCAAGACCGTACAGTTGCGATGAGTGTGACAAATCCTTCCTGAATCAACAGAACCTGGTGCAGCACAAAAAGTTGCACTCGGGACTCAAGTCTTATGTCTGTGAAATTTGTCAGAAGGCGTTTGGTACACAGCACAACCTGGACGTGCATAAAATTGTTCACTCGGGCAACAAACCATTCATCTGCCGGACGTGTGGCAAAGGCTTTGCTCGTCGGGCTGAGATTCGAGATCACGAGCGTACGCACACCGGCGAGAGGCCGTTCAGATGTGACATTTGCCCGATGGCATTCGCCCAGAGATCGAACCTAATGACGCACAAGAAAGCCACTCATCTGAATGACAAGAAGCACAAGTGCACGCTGTGCGAAAGATCATTCAAGCGACGGAGACTGCTGGAGTATCATACTCAGTCGGCGCATACCGGCGAACGGCCACACAAGTGCGAGGTGTGCAGCGCCACGTTCGTATATCCGGAGCACTTCAAGAAACACATGCGTATCCATAGCGGAGTTAAACCGTACGCATGTGAAGTCTGCGGCAAGCTGTTCAACAGCAGAGACAATCGAAACGCTCACAGATTCATCCACAGCGAGAAGAAGCCATACGAGTGTTTGCAATGTGGAATGGGCTTCATGCGCAAGCCGCTGCTGCTGGCCCACATGAAACACACCAAGCATGTCAACGACACCATTATTGTGAATCAACCGCAGATCAGTCACAAAGGCGTTGAAGAAGTCGAAAACGAGCTGACAGACGAGGACCTGGAGTTGAATAGTCGACGTATATCAATTGTAGGCAGAGCAACGTCGTTCGATGAGGTGGCTACCGCCGACACGATACTAGTTGAAGATGGCGACGGACAGTACATCAAGGACGAAGATGGCGAAGTAAAATACCTGCAGTTCACCGAGATGGACAAGGATGGACAGGCGACATATTGGGTGGACATCGGCGAAGACAAGGAAGACGATAATTAG
Protein Sequence: MTEIISQISNYTTELFKCFLCDRIFADGDEPWHLFEKRLLENGQQDCPLATILSSALGKEIEQDNVHSKLLCDECNLILVEYESVEKRFYQFRLKILSDYNNTAKENGLDPVWFEIGDVEDSAQTDSQLVEESESTLNVEEVKTERDMEESVVIPMLVHQEIDSFVVEDVQGQFQDGIVPEFVTEGVAVINDNIQEQHEEQELEDAASSAYAERNIQIMGEEITYEQIIEQNSVISYDNSVDTAESVIGYNSSIDDEPPILPDDIPKPQKQKRTSRTIKRETETEPIDFELVDNMYICALCPDKSEHEPIVFPNHLKNVHNYKFYVCDMCNKGFNKRSEINDHMDEAHGGGAEEGEFQCETCLRVFLNHRLFRNHKRLHYISTKHHECSECHKKYSSKNLLDEHMNMHTGKRPYKCASCAKDFASKYTLQAHLKIHTKRPRPYSCDECDKSFLNQQNLVQHKKLHSGLKSYVCEICQKAFGTQHNLDVHKIVHSGNKPFICRTCGKGFARRAEIRDHERTHTGERPFRCDICPMAFAQRSNLMTHKKATHLNDKKHKCTLCERSFKRRRLLEYHTQSAHTGERPHKCEVCSATFVYPEHFKKHMRIHSGVKPYACEVCGKLFNSRDNRNAHRFIHSEKKPYECLQCGMGFMRKPLLLAHMKHTKHVNDTIIVNQPQISHKGVEEVENELTDEDLELNSRRISIVGRATSFDEVATADTILVEDGDGQYIKDEDGEVKYLQFTEMDKDGQATYWVDIGEDKEDDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00724974;
90% Identity: iTF_00316203;
80% Identity: -