Cgro017039.1
Basic Information
- Insect
- Cheilosia grossa
- Gene Symbol
- mbr-1
- Assembly
- GCA_963082955.1
- Location
- OY720147.1:45387704-45388291[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.6e-10 1.9e-07 31.1 0.0 3 36 14 48 13 54 0.89
Sequence Information
- Coding Sequence
- ATGAGTCGAGCAACTAAAAGTAATATTTCCTACAATGTCACTGATTTGTCAAACGCTCTACACGAAATTCGCCAGAATAAAATGCCTATTAGGGAAGCTTCTATGAAGTTTGGCATTCCAAGATCCACTCTACGAGACCGGGTTCACGCAAGAGCTATAGACGAGCCTTGCAAAAGGGGCCCTTGTACTGTGATTTCAATCGAAGAAGAGGAAAAACTAGTAAGCTGGCTAATAACTTTGGCCAAATGTGGTTTTCCCCAAAGTCCAGAAAAACTTCTTACCACagtgcaaaatattttaaaagatgaaGGCCGAAAAACTCCATTTAAAGGTTGTAAGCCAGGGAAAAAAtggtattataattttttgaagCGCCATCCGACCTTAAGTTTACGAACACCAGAATCCCTAACGAAATCTCGGGCCGCAATTACAGAGCAGGGTATTAGGAAGTGGTTTCAGGACCTTAAAAAATATCTAAAAGAGGAAAACGCAGAAGATATTCTTGAAGATCCCTCCAGAATTCTAAATGCTGATGAGACCGGCTTTAGTATGGCTCCTAAAACTGGAAACGTATTGGCTCCATAA
- Protein Sequence
- MSRATKSNISYNVTDLSNALHEIRQNKMPIREASMKFGIPRSTLRDRVHARAIDEPCKRGPCTVISIEEEEKLVSWLITLAKCGFPQSPEKLLTTVQNILKDEGRKTPFKGCKPGKKWYYNFLKRHPTLSLRTPESLTKSRAAITEQGIRKWFQDLKKYLKEENAEDILEDPSRILNADETGFSMAPKTGNVLAP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00240651;
- 90% Identity
- iTF_00315087;
- 80% Identity
- -