Cnem002200.1
Basic Information
- Insect
- Chalcosyrphus nemorum
- Gene Symbol
- dsx
- Assembly
- GCA_949716465.1
- Location
- OX454332.1:32829031-32829717[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-24 3e-20 71.9 10.9 1 47 31 77 31 77 0.97 2 2 0.59 2.9e+03 -1.6 0.1 8 13 213 218 211 221 0.82
Sequence Information
- Coding Sequence
- ATGTCCTCGGATACAGGTGCATATCGCAGAAGCGAAGAGGATGCCGGTGTTACAGCAGCTACTTCTGCAACTGATAGTTCCATCTCACTACGTACACCGAACTGCGGTCGCTGCAGGAATCACGGCATCGAGGTCGCGTTGAAGGGACACAAGCGCTACTGCAAGTACAGAAATTGTGTCTGCGACAAGTGTCGTCTGAATGTCGAGCGCCAAAGATTAATGGGAATGCAGACAGCATTGCGTAGAGCTGAAGTTCATGACGAGGCCAGAGCTCTATCAATTACACCACCAAACGTTGCTGCTCCTCCGATTGTATATGGACAACAAATTGAAGCCGCTGGGGCTAGTAATTATCATCCAATGTCAGCGCTACCTTCCTGCTATTATTACCCTTCAGCAGCGGCTGCTCCATCGATGTCAGGAATGAATATAGCACCAATTGGTTCTTATGGAGATTCCAGACAACAGCCGTCCACACCGGATGTTATGCTGGAATATTGTCATaagcttttgaaaaaattccgaTATCCTTGTGAGATGTTGCCGCTCATATACACGATACTTAGGGATGCCAATGTGGATCTGGACGAGGCCTCTCGACGCATCGAAGAGGCCCAGGTGGTGATCAACAATTTTTGTCGTCAACATAACTTGAATTTTTACGACGCTGGGGTATTGCGGGGCTGA
- Protein Sequence
- MSSDTGAYRRSEEDAGVTAATSATDSSISLRTPNCGRCRNHGIEVALKGHKRYCKYRNCVCDKCRLNVERQRLMGMQTALRRAEVHDEARALSITPPNVAAPPIVYGQQIEAAGASNYHPMSALPSCYYYPSAAAAPSMSGMNIAPIGSYGDSRQQPSTPDVMLEYCHKLLKKFRYPCEMLPLIYTILRDANVDLDEASRRIEEAQVVINNFCRQHNLNFYDAGVLRG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -