Cnem008692.1
Basic Information
- Insect
- Chalcosyrphus nemorum
- Gene Symbol
- dsx
- Assembly
- GCA_949716465.1
- Location
- OX454333.1:47620711-47621292[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-25 1.7e-21 75.9 11.1 2 47 40 85 39 85 0.97
Sequence Information
- Coding Sequence
- ATGGTTTCTGAAGATAATTGGACTGACACAATGTCAGATACAGATTTATTGGATTCTAAGGCAGACATTTGTGGCGGGGCATCCAGTTCAAGTGGTAGTTCTTTGTCACCACGAACTCCTCCGAATTGTGCTCGTTGCCGGAACCATGGCTTGAAGATAACACTGAAGGGACACAAGCGATATTGTAAATATCGATATTgtaattgtgaaaaatgccgATTAACCGCTGAGCGTCAAAGAGTAATGGCATTGCAAACATCGTTGCGTAGAGCTCAAGCTCAAGATGAAGCCAGGGCATTATTAATGGGTGAAGTGCCGCCGATAACACCTGCTACATCGTTcttgcatcatcatcatcatcttcatcatcatcataaccaGCCATCAAAGAGTCCAGATGAGCACAATAATGATCATCAGATGACTGTGCCAACACCGGCACAATCTCTGGAGGGATCCTGCGATTCATCATCGGCTTCACCGTCATCAACATCAGGCGTTGCGCCACCGGTATCCGTTTCATCGGTTAGGAAGCTAACGCCCATCCATCCAAATGGGGCTAATATGCCACTAGGTAAGTGA
- Protein Sequence
- MVSEDNWTDTMSDTDLLDSKADICGGASSSSGSSLSPRTPPNCARCRNHGLKITLKGHKRYCKYRYCNCEKCRLTAERQRVMALQTSLRRAQAQDEARALLMGEVPPITPATSFLHHHHHLHHHHNQPSKSPDEHNNDHQMTVPTPAQSLEGSCDSSSASPSSTSGVAPPVSVSSVRKLTPIHPNGANMPLGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00311075;
- 90% Identity
- iTF_00311075; iTF_00315203; iTF_00312630; iTF_00313496; iTF_00315993; iTF_00311838; iTF_00724814; iTF_01253915; iTF_00672231; iTF_00240776; iTF_00314330; iTF_01542234; iTF_00389644; iTF_01541463; iTF_01223451;
- 80% Identity
- -