Cnem005690.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chalcosyrphus nemorum
Gene Symbol
egg
Assembly
GCA_949716465.1
Location
OX454332.1:99023810-99031879[+]

Transcription Factor Domain

TF Family
MBD
Domain
MBD domain
PFAM
PF01429
TF Group
Unclassified Structure
Description
The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3e-16 1.2e-12 47.4 0.1 6 75 1577 1639 1575 1641 0.90

Sequence Information

Coding Sequence
atggaaaagaaCATAACAAAAGATTTGCTTAAAAAATCATCTCCTGGCGGCGAAAGTTCAGTTAGCCTCCATGCGGAAGAGACACCCACCCCTAGTGTTTCTACcggaaaaattgtaaaatcaacgGAAAAGGTAGTTAAAGAATCATTAAAAGTAGGTTCAACAACTCaagaagatgaagaggaagatgatTTTGTCCTACGGCTCCAATTGAGCGATGATGATGCTTTTGTAGACGCAATAGACGAGTTGATTGACCCGAACAAACCCACCGCAGGAGAGAAATACTTCTCTGACATAGAAAGCTCGGACGATAGCCAAGTTTATGAACCAACACTTGACCGAGTGGTGGAGGATGTAGCTGGCGGGGTTAAAAGCATTGGCTCGACCATAGTATCAGAGAAGTTAAGTAGCGTTAAGGAGGTgcagaaagagaagaaagtttTAGAACCTGAGTTCGAGCCAGTCGAATCCGAGGAAGATGATTTTGGAGACACTCAGTCACTTGAGGGAACAGTGGAGGCACTGTTAAAGGAAGTGGGTCCACCCGGTGATGTAGACGAGGTTAGTATTGATACTGGAGACGCTTCAGAGGACATGGCGCCATTAGTTTTTGAGGAAGATAATGTGACGTTAGTTGAAGAGGAGACAACCGTAACTGAGGAGCAATTTCCAATCGAAGATGAACAAAGTGCTGAAGGAAGCCCCAAAATAAATCCGGAAGAGTCATTAGCAATCCTGAAAGCATCTGAAAACGAGAAAGAAGCTGTAGATGATGAACTAGACTCTCTAGATGAGGTAAGCAGTGCTGCTTCATTGGCAGAAGAATCATGCGTAGAGGATAAGCCAGACATGAAGAAAGACGGTGTCCAAGATGATTTGGGCAATGATAGAGAGGTAATAAGCGAGTCTAAAAAGAATACTAAAGAGGATGCTAATGTGGCTGATGACAAAGACGCTTCAAGTTGCTCAACAGTAAATGCAGATGAATCTAAATCTAAAGAACTGGCTAACAAAGAGAAACAAAGTGTTTTAGAGCCAATGGATGAAAACATGGGAACTGATAGCAGTCCAAAGGCAAAGGGaaatgttgaaattgaaaagaaagatAGTCCTACCCAGAAAGTACTTGAAGAACAGACATCCACAGATGTTCAAAAACCAGAAAGAGATGTGAAAGCTACAAGCAAGAAGGAACTGAAAGAAGAAGACAAGCATTCGGCAAAAGAAATACCATCTGGTTCTAATCAGAAATCTTCTAACAAATCTAAAGAAGAAGCTGTTGAGGCTGAACCTGAGGAAAGTCAAactgaagaaattgaaaaagtgACAGAAAAAGACCCAGAAAAAGTCTTGTCACCTACAATAGTAGACAATTCGCAAATAACAGAAGCGCCATTTGAAGAACCAGTAAAAGCAGCAGTCGAAGAGAACAAAGCGGCTCAATCGGAAGGGAAAACTATCACAGAAGTTGCCTCGTGTAAGACCAGATTAATTTCATTCGatccagaagaagaaataatgCCTGAGTCCAAAACACCGAGGAAATCGATAAAAGAAACCGAAAACTCGGTAGAACCAGAGGAGACTTTGAAAATCTCATCAAAGAAAATCGATAAGGGATCTGAAGACAATTCAGTTGAAAAGGAAACGCCCACAGAAGAAGCTAATAGGTCTCAAAAGTCAGCTGTGAAATCATTGACGACAAGCGAGACACAGCTGAAAGATGTGCAGTACACTTTTGACGCAAAATCTGAGCCACCGCCTACGAGTTCCGATAAAgctttgaaatcaataaaaacgaTAGAAATACCGAAGGATTCTGTGGAGGAATTTCCAAATATCCCCAGCGAAGAACAAGTTTTGGCGGAGAAACAATTACCCGAAGAGAAGACACCTTCCGAAACAACAGAGAAAATTGAAACATCCATTGCCATGGAAGTTGATAAAGCCGTTgccgaaaataataaaaccaaaccaaaggaAGATGAAGCTCCAAAGTCAGTTGAAGATATAAAGGAGTCCACTGAAAATGACGCAAATAAAACGACTCAAAGTGCGACAATTACAGAAACATCCGAGAAGGAGAGTTCTAAGGAGGATGAAACAATAATGCCGACAGTTGTGTCAGAAATCACTGACGATATCGAAAAAGCAGAAGATGAATTGAAAGAAGCTGAAGATAAGGACGAGACTAAAGCAGAAACTGATGAAAATAAGAAGATCGCGGATGAGGAAAAACCTTCTGAAGCTGCTTTAGTTCAACCACGAACTGAGGAAACCGAACACAAGGCTGAAGAGGGATCAAAACCTGAAAACGCAAAGGATGACACTACTAGTGCCATGGGCAGCAAGAATCTAATTGAGGAAATCGCTGCAAATGAAGTAGTAAAAACGATAATTGAACCCGTTGTCATTGAAATCGATGATGAGGACAATGACAAAGACACCAGTAAAACAACTGGCGACAAGGACAGCACTAAGAAGCAAGATGATGTATCAGCAAGTACAGAAAAGGATGAAAATGATAAGAAAGAAGACAATCCAGCAGCCGAAAGTCAATCTGAAGAGGGTAAACCAGAGTCAACCACAGATGAGCGGGAGAAACCTTCCGTAGAAGCAAAAACTACTACCATAGAAAAGGATCTAGAAAAGTCTGTCCCAGTTAAAGAACTTAAAAAGCCAGAAGCAAAGCCAATCGATGAACCTAAGGAAACAAAGGAAACTACTGAGAAGGATGATGTCGTTGAAATGATGGAAATCATTGATGATAAACCTGAAGCAGCAGcgaaaccaaaagaagaacaaaGCATTAAGGATGATACCATGATTAAATCTGCTGAAGCAGCACAGGCTCGTCCCGATGATGACGAAGAACCTCTACTGATGATAGACACAGCTCACAAGGACGATAATGACAATGAGGACAATGACAATGATATGGATACCGAGACAGAACAGACAGCGACATCAGCACCAACAACAGACTCAAGTAGCGATGGCTCATTAGAGGTGTTCTATGAAAAAGAATGTGTGAACTATGAGTGCAAACGTGGCAGTAAGAATTTCTATCGAGCAACTTTATTCTCATTGAATTACTATAAGATATCAAAGAAACGAAATAAGGTACAATTTGCCTGTGAAGAGTGTTATGATCGAGCGCTAGATTCATATGAGgaAATGTGTAGAACACTGAAACAGAAACAACCTCTGCTGCATGGTGCGACATTCAAGGGACAGGAATACGTAGAAATTATCGATAGCAGTGACGAGGAGGAGAGCGACAGCACCGCAGAAAAGACAAAAGATGAAAATACACTTCCAAAGGAAAGCATTCAGCTACTCGAAGCCGAACTGGAGGGTGCAATACGCAAGGTTATGCACAATGTAGAGATTCAAAATCAATTGTCATGGACAAAGCAGATACTACAACAACGTTTGAACAATCTCGAACAGGATACACAATTTGTTAGCGAACAACTGCGCCTGCTTCAAAAGAAAACCGACAGCATGCACAATTCACTGTACCAGTgtcctaaaataaaaattcgccAATTAACTCCATTAGATTTGAACAGTGGACGTTCGTATTATCCAGAAACAGAATCTACAataccACCTGTGGGGGAAGTACAACGCCCACCAATTCATATAAACGAAACATATTATGCTGTAAAGAACAAGGCAATTGCCAGCTGGGTACCATGTAGAGTTATGGACGCCATTGATGGCTATCTTCCGCATTCAAAGAGTGTGAAGCATTATAAAATCAAGTTTTTAAAGTCGAAATATCCCATGCTAAAGACTGTCTCAGCGAAGCATATGGCTTTCTTCAATGCACCGAAAGTTAGACTGCCAATTGGAACACGAGTAATTGCTTACTTTGATGCGACATCTCTTGCAAGAGGCAAAGAGAAAATGCAAATCCCGAGCGCATTCTATCCCGGCATCATTGCAGAACCCCTAAAGTTGAACAACAGATATAGATATCTTGTTTTCTATGATGATGGCTACTTTCAATATGTGTACCACAAGGACGTCCGCCTGGTATGTCAGTGTTCAGAGAACGTTTGGGAGGATGTTCATCATCAGTCGAGAGAATTTATTCACAATTACCTCACTCAATATTCAGTCAATCGGCCAATGGTACAGACACAAAGAGGTCAAAGTATGCTGGTCGATTACAATGGCAAATGGATCTATGCGCGTGTAATTGACGTCGATTGTAGTTTGGTGCAAATGCTCTACGAAGGGCAAAGCCGTTCGGAATGGATTTACAGAGGATCAACACGATTAGGACCAGTCTACAAGGaatcgaataatttagtgcaaaaGAATCAGTTTGGCGCATCACGAAGGGTGGGATCGCGTACAGAACCATTTATTCGCTATTTCAATGGTGATGATGCATCATCAACATCACTACCGCCAGAACCACCAGAACcgaagcaacagcagcaacaccaaCAGCCAAAACCGGGTGAAGCACGTTCGGTGGCCAAGAAGAGCGTAAGTCGAAGTGATTCGAGTACATCGCAAGGCTCACAACCTATTCCAACCGTTCGTCACTTAAAcaattcaacaatttttgttGATGACGATAACAAGCCCAAAGGAAAAGTTGTCTACTATACAGCAAGAAAGAATCTCCCACCACGCGATTATGTTCCACACATTTGTAGTCCATCATGTCCGTTTTCCATAACGCATAATTTAATGTACTACAGTCCATTGGCTAAGCCGCTGCTCTCTGGCTGGGAACGACAGGTATTCCGGCAGAAATCAAAGAAGTTCATCGTCTATCGTGGACCGTGTGGCAAACGAATGCGTAGTATGGAAGAACTCCACCGATACCTTCGGGTCACCGATAACGATCTGAATGTAGATAATTTTGACTTTAGTCCAGAGACAAATTGTCTGGCGGAATATGTCATCGAAAGTTGTATCGTTCAGAAGAAGGACATCTcaaatggaatggaaaaaatGCCTATTCCCTGTGTTAATTACTACGACAACACAATGCCACCAGACTGCATATATTCTAGCCGACGGATCCCCACAGAGGGTGTTCCTTTGAATTTAGATAGAGAATTCCTGGTCGGTTGCGATTGTGAGGATGATTGTTCGGACAAATCTAAATGCTCTTGTTGGGAATTGACTTACGCAGGAGCGAAGTACGGAATGCCGAACGTTCCTAATGAAATGGTTGGCTATCAATACAAGCGGCTGTATGAGCACGTCCCCACAGGAATCTATGAATGCAATTCAAGGTGTAAATGCAAAGCGAATTGCGTGAATCGTGTTGTCCAACAACCACTTCAATCCAAGCTACAAGTTTTCAAAACCTCGAATCGTGGCTGGGGCTTGCGTTGCATTAATGATGTTCCACGTGGCAGTTTCATCTGTGTGTATGCTGGCCATCTGCTTACCGAACAAAAGGCCAATGAGGGTGGCTTGGATGCAGGAGATGAGTACTTTGCCGAATTGGATTACATTGAAGTGGCAGAACAAATAAAAGAGGGCTATGAATCTGATGTTGTCGAACCAGACGAGGATGAGgaACTTTACAATCCCGAAAGGGAAGACGATGATGATTTCATAGCTCCCAGTGAATCACATGGTGACAAAGCGTTCAACACTCGCTTAAGAGCAAGACGATCGACGAAGGGTAGCACTGATGCTGAACACGATTCGCAAGAACGGCAGGTGATCAGTTTTGAACCAAACAAGACAATGGGTCAACCAGATAATACTTCTACTGAGAAACAAACAATCCGCAAACTGTTTGGTAAAGACGAGGCTTGCTATATAATGGATGCGAAGGTCACTGGCAATTTGGGGAGATACTTTaacCATTCCTGTTCGCCAAACCTGTTTGTGCAAAATGTATTCGTTGATACTCATGATCTGAGGTTCCCTTGGGTAGCGTTCTTTGCATTCACACACATAAGAGCTGGCACTGAACTGACTTGGAATTATAACTATGAAGTAGGTGTTGTGCCGGGAAAAGTATTGTATTGTCAGTGTGGAGCTCCGAACTGCCGACAGCGATTACTTTAA
Protein Sequence
MEKNITKDLLKKSSPGGESSVSLHAEETPTPSVSTGKIVKSTEKVVKESLKVGSTTQEDEEEDDFVLRLQLSDDDAFVDAIDELIDPNKPTAGEKYFSDIESSDDSQVYEPTLDRVVEDVAGGVKSIGSTIVSEKLSSVKEVQKEKKVLEPEFEPVESEEDDFGDTQSLEGTVEALLKEVGPPGDVDEVSIDTGDASEDMAPLVFEEDNVTLVEEETTVTEEQFPIEDEQSAEGSPKINPEESLAILKASENEKEAVDDELDSLDEVSSAASLAEESCVEDKPDMKKDGVQDDLGNDREVISESKKNTKEDANVADDKDASSCSTVNADESKSKELANKEKQSVLEPMDENMGTDSSPKAKGNVEIEKKDSPTQKVLEEQTSTDVQKPERDVKATSKKELKEEDKHSAKEIPSGSNQKSSNKSKEEAVEAEPEESQTEEIEKVTEKDPEKVLSPTIVDNSQITEAPFEEPVKAAVEENKAAQSEGKTITEVASCKTRLISFDPEEEIMPESKTPRKSIKETENSVEPEETLKISSKKIDKGSEDNSVEKETPTEEANRSQKSAVKSLTTSETQLKDVQYTFDAKSEPPPTSSDKALKSIKTIEIPKDSVEEFPNIPSEEQVLAEKQLPEEKTPSETTEKIETSIAMEVDKAVAENNKTKPKEDEAPKSVEDIKESTENDANKTTQSATITETSEKESSKEDETIMPTVVSEITDDIEKAEDELKEAEDKDETKAETDENKKIADEEKPSEAALVQPRTEETEHKAEEGSKPENAKDDTTSAMGSKNLIEEIAANEVVKTIIEPVVIEIDDEDNDKDTSKTTGDKDSTKKQDDVSASTEKDENDKKEDNPAAESQSEEGKPESTTDEREKPSVEAKTTTIEKDLEKSVPVKELKKPEAKPIDEPKETKETTEKDDVVEMMEIIDDKPEAAAKPKEEQSIKDDTMIKSAEAAQARPDDDEEPLLMIDTAHKDDNDNEDNDNDMDTETEQTATSAPTTDSSSDGSLEVFYEKECVNYECKRGSKNFYRATLFSLNYYKISKKRNKVQFACEECYDRALDSYEEMCRTLKQKQPLLHGATFKGQEYVEIIDSSDEEESDSTAEKTKDENTLPKESIQLLEAELEGAIRKVMHNVEIQNQLSWTKQILQQRLNNLEQDTQFVSEQLRLLQKKTDSMHNSLYQCPKIKIRQLTPLDLNSGRSYYPETESTIPPVGEVQRPPIHINETYYAVKNKAIASWVPCRVMDAIDGYLPHSKSVKHYKIKFLKSKYPMLKTVSAKHMAFFNAPKVRLPIGTRVIAYFDATSLARGKEKMQIPSAFYPGIIAEPLKLNNRYRYLVFYDDGYFQYVYHKDVRLVCQCSENVWEDVHHQSREFIHNYLTQYSVNRPMVQTQRGQSMLVDYNGKWIYARVIDVDCSLVQMLYEGQSRSEWIYRGSTRLGPVYKESNNLVQKNQFGASRRVGSRTEPFIRYFNGDDASSTSLPPEPPEPKQQQQHQQPKPGEARSVAKKSVSRSDSSTSQGSQPIPTVRHLNNSTIFVDDDNKPKGKVVYYTARKNLPPRDYVPHICSPSCPFSITHNLMYYSPLAKPLLSGWERQVFRQKSKKFIVYRGPCGKRMRSMEELHRYLRVTDNDLNVDNFDFSPETNCLAEYVIESCIVQKKDISNGMEKMPIPCVNYYDNTMPPDCIYSSRRIPTEGVPLNLDREFLVGCDCEDDCSDKSKCSCWELTYAGAKYGMPNVPNEMVGYQYKRLYEHVPTGIYECNSRCKCKANCVNRVVQQPLQSKLQVFKTSNRGWGLRCINDVPRGSFICVYAGHLLTEQKANEGGLDAGDEYFAELDYIEVAEQIKEGYESDVVEPDEDEELYNPEREDDDDFIAPSESHGDKAFNTRLRARRSTKGSTDAEHDSQERQVISFEPNKTMGQPDNTSTEKQTIRKLFGKDEACYIMDAKVTGNLGRYFNHSCSPNLFVQNVFVDTHDLRFPWVAFFAFTHIRAGTELTWNYNYEVGVVPGKVLYCQCGAPNCRQRLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-