Cnem011184.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chalcosyrphus nemorum
Gene Symbol
Rel
Assembly
GCA_949716465.1
Location
OX454333.1:86428831-86432672[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.8e-50 1.6e-46 158.5 0.4 1 168 99 283 99 284 0.93

Sequence Information

Coding Sequence
ATGCATAACGAAATCTATGATATGGACAAGAAGTTATGTTTTAGTGACAATTCTATGTCGGTTCCTTCCCCTTGTTCGTCACAATCCTCTATGTCGTCCTCAACATCAGGATATTCAAGTAACAGTGCTGTTAGCAATACTTTGCCACTAATGAACATTCCGCGATACGATGTGAACGGTGGCGATATAAACATGACCTTTACCAGTGTGCCAGTACAGAATCTAAATCTGGCACATTTCATGCAAGGAATGCCCGGAGTCGGTGAACCCACAGGAATAGGATACACCAGCCAGTTGGTGATATTGGAACAGCCAACGGAAAAATTTCGCTTCCGTTACAAATCGGAAATGCATGGGACCCATGGATCCCTAAATGGTGATCGTTcggaaaagaataagaaaacatttcCTGAAGTTGAgctgaaaaatttcaatggaatGGGAGTTATACGCTGTAGTTTGTACCAAACAAATATGGATAAACCGTCGCCGCATTCGCATCAGTTGGTCGTGCGTAAGGACGAAATGGACGAGTGTGATCCGCATGATGTTTATGTGTCGCCTGAAAAGGGGTATATTGCTAGATTTGAGAACATGGGAATAATACACACAGCTAAGAAGAATATATGCGATGCTTTGTATGCGAAGAAGAAACAGAAGCTGAAATTCGAAACGGGCTGTGAGGAGTTGTCACAGCGGCAAGAGAAGACCTTGCGAGATGAGGCGGAACGCGAAGGGAAACTGATGAATTTGAATCAGGTCCGTCTTTGCTTTGAAGCTTTTCAAATTGTCGACGGTGGAGTCTGGAGAAGAATTTGCGAGCCGGTATTTTCTCGTCCAATTAACAATCGTAAAAGTGCCTTAACTGGTGAGTTAAAAATCTGTCGCCTAAGTACAGTTGTTGGCAGTGCTGCCGGCGGTGAAGACCTAATACTTTTAGTGGAAAAAGTCAGCAAAAAGAACATACAAGTTCGTTTCTTCGAACTGCATGATGACGATCAAGTTTGGGAAGCATTTGGTGATTTTTCCGACGCCGACGTACATCATCAGTATGCGATTGTAGTTCGTACACCACCGTATCGTAATAAGGATATCGATACAAATGTAACCGTTTTCATAGAACTAGTACGCAAGAGTGACGATGAACGTAGTGCACCACTTAATTTTCGCTACAAACCACGTGATATTGTTTTATCACGCAAACGAAGACGTACCTCATACCCATCGTCAACATCAAGTCCGGTTAGCTCATCAGAACTCCCCGAACCAGTGGCTAAAGGATTGCCACAATATCAACAACAACcacagcaacaccaacaacaacaacaaccccaAACAATAAGCCAAGAGTTTGACAAAGATCAACAATTGAATATGCTTTTTCAGCCAAATTCAACGGAATACCAGTGTACTTTCAGCAGCTTCATGCAAAAGGTCAACGTTGATTCAGATGAATTAAAGTTAATTTCTTCCGATCTTGCCCTATGGGACAACTTTGGTCTGGTAGCCGGTGAAGGTGAACTTCAAACCGACGGCGAAGCTCCTACAAAAGTAAGACAGCGGCAACAACTTTCCAGCTTCGAGACAATTCACATGAATCCACAACAGCAACACCATCcgaaaataaaatccttaataTCACTAATTAACGACAAGAAACTTGGTCTGGATAATATTCGAACAGAAGTTCGAAAAATCTTCGATGATTCCTCAGCAGAAAATGACAATGGCGATACTATAATTCATGACATCGTTAAACAAGGCCAGGGCGCAGATGCaataaatcttttcaaaattctctcgaaatTGAATCTAACCGATCTGCTGTCTCAGACAAACAACCTTGGCCAGACTCCATTGCATGTGGCTTGTATATTCGATCAGGCCATGTTTATACGACCTCTACTCGGTCTTAAGTGTGATCCCAATGTTCAAGATACCGTCGGTAATACAGCATTGCACATTGCCATCACAGAAAATCTTAAGGAATGCCTGGAGAGTTTCGCTTCACACATAACAACCGCCAGTGACAGCAGTAATCTAAACGTGAATTTGGCAAACGACATTGGTTTGACTCCCCTGCACTTGGCCATACGTCAAAACAATATCAATTTCGTTAAGATCCTTTTGACCAAATGCAATGCATCAGCAAAAGTTGCAAGTTCTCGCGATGGCAACAACGCTCTACACTTAGCCGTTCAGCATCAGAATAAAAATATGGTAAAATGCCTCTTGGAAAACAGCAAAGTTaaagtgaatgcaaaaaatcgtTCTGGTCACACTGCAATCGAATTGGCAAAGGCACTGCCAGGTGAGTTGAAAAAGGAAATTCTCGACTTACTACAGGCAAAACTGCCATCATCGAACGAGTTGCTGGCATCTGACCCAATCAAAGACGAACCGGATGAGGATAATGATAGTTCAACCGAAGACGATGACGATAAGTCACTGAGTTCAGAAATCGAGGAACGTAACGAAGAGACACACTTAAAGCGATCTCTACAGGACGAGAAGGTACGCAGCCGCCTTGGGGCAATCCTAAATGTTGATAATAAGTGGAAAAAACTTGGTAGTGAGCTGAAATTAGATCATCTGCTATGTATGTGGGTAAATGCTGAACAATTTTTGCAATACATTCTAAATGAAGAAGTGACGGCGCAAAAACTCTTAAATGCACTACAAGTAGTCGACCCCGAGGCTGCCAGTATGTGCACTTCACTACTGAAGACATAa
Protein Sequence
MHNEIYDMDKKLCFSDNSMSVPSPCSSQSSMSSSTSGYSSNSAVSNTLPLMNIPRYDVNGGDINMTFTSVPVQNLNLAHFMQGMPGVGEPTGIGYTSQLVILEQPTEKFRFRYKSEMHGTHGSLNGDRSEKNKKTFPEVELKNFNGMGVIRCSLYQTNMDKPSPHSHQLVVRKDEMDECDPHDVYVSPEKGYIARFENMGIIHTAKKNICDALYAKKKQKLKFETGCEELSQRQEKTLRDEAEREGKLMNLNQVRLCFEAFQIVDGGVWRRICEPVFSRPINNRKSALTGELKICRLSTVVGSAAGGEDLILLVEKVSKKNIQVRFFELHDDDQVWEAFGDFSDADVHHQYAIVVRTPPYRNKDIDTNVTVFIELVRKSDDERSAPLNFRYKPRDIVLSRKRRRTSYPSSTSSPVSSSELPEPVAKGLPQYQQQPQQHQQQQQPQTISQEFDKDQQLNMLFQPNSTEYQCTFSSFMQKVNVDSDELKLISSDLALWDNFGLVAGEGELQTDGEAPTKVRQRQQLSSFETIHMNPQQQHHPKIKSLISLINDKKLGLDNIRTEVRKIFDDSSAENDNGDTIIHDIVKQGQGADAINLFKILSKLNLTDLLSQTNNLGQTPLHVACIFDQAMFIRPLLGLKCDPNVQDTVGNTALHIAITENLKECLESFASHITTASDSSNLNVNLANDIGLTPLHLAIRQNNINFVKILLTKCNASAKVASSRDGNNALHLAVQHQNKNMVKCLLENSKVKVNAKNRSGHTAIELAKALPGELKKEILDLLQAKLPSSNELLASDPIKDEPDEDNDSSTEDDDDKSLSSEIEERNEETHLKRSLQDEKVRSRLGAILNVDNKWKKLGSELKLDHLLCMWVNAEQFLQYILNEEVTAQKLLNALQVVDPEAASMCTSLLKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01223157;
90% Identity
-
80% Identity
-