Csis008803.1
Basic Information
- Insect
- Chalcis sispes
- Gene Symbol
- -
- Assembly
- GCA_949987625.1
- Location
- OX465095.1:4446929-4485940[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.65 2.9e+04 -4.9 42.4 28 157 36 171 25 178 0.60 2 2 3e-10 1.3e-05 25.9 0.2 320 381 252 314 242 320 0.87
Sequence Information
- Coding Sequence
- ATGTCGGTCCAAGCGGAGCAGGCGGCGGCCCGGGGTGCGCCGGACACTCGCCACGGTCACCATCATCACGGCCATCACAACCACGGCCACCACGTCGAGTCGGATCCCGCCATCGCATCGCTCTTTCGCGCTCCAGTTAGGGTAAACCCGGACGCCCAAGACCGAACTACTCAGCAGATCCAGTCAAAGCTGGGTAATTATTCGCTGGTAAAGCACTTGCTGGACGAGCCAAAGCGACTGATCGGTATCGAGGGAGTACCGGCAAGCCCGGCGCCCGTACCTTCGATCCACTCGCGCATGTCGACGAATCGCAGCTCGCCCTCGTCTTCGTCGCAGGAGTTCAAAAAACCCGGTGGGCCGCGCTCCTCCTCGGCGACGAGCTCCTCCGTCGCGGcgccctcctcctcctccatctCCTCGTCGTCCACctcgtcgtcctcgtcctcCTTGGCCTCCACTACCTCCTCCACCACCTCCTCCACCTCCACCTCGtcctcgtcgtcttcgtcgcaACGCGGCGGCTTCGTCAAGCCGGCGGATGGTAAACCGCCTTACGGCGGCCGCGGCGGCTATCCCGGCCAGCCGATAAAAcacggcagcagcagcagcaacgagcACCGTAGCCATGGGCTCATACCGGCCAAAGGCCCACCGCCGGGCGGACAGGCTTCCGGACCAGGAACCATGGGATCCGCGAGCGCCGCCAGCGGACAGGCTGGACTCTTGGGAGGGAACAGCGGCAGCATACAGAACAGACTGCACACGGCCAGCGTCAGATTGCCCAAGCTGCCCATTGATACCGGTACGAGCTCGAGGCATCTGAGCGCCGACAGTACGGCCGAGGTGGAAACCATTCTAAAGGAAATGACGATGCCACCAACGCCGTTGACTGCGATCGCCCAAACGCCCAGAAAAGAATTGGAATCTAAGTTTACTTTTAATCCCGTTCTCGCCAAgCTGGAAGTTCCGGCACCAGAACCCGTCAAACCTCGTAAGTATTTCGTAACTATTGATCTCAATatcttttttatcgattaa
- Protein Sequence
- MSVQAEQAAARGAPDTRHGHHHHGHHNHGHHVESDPAIASLFRAPVRVNPDAQDRTTQQIQSKLGNYSLVKHLLDEPKRLIGIEGVPASPAPVPSIHSRMSTNRSSPSSSSQEFKKPGGPRSSSATSSSVAAPSSSSISSSSTSSSSSSLASTTSSTTSSTSTSSSSSSSQRGGFVKPADGKPPYGGRGGYPGQPIKHGSSSSNEHRSHGLIPAKGPPPGGQASGPGTMGSASAASGQAGLLGGNSGSIQNRLHTASVRLPKLPIDTGTSSRHLSADSTAEVETILKEMTMPPTPLTAIAQTPRKELESKFTFNPVLAKLEVPAPEPVKPRKYFVTIDLNIFFID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -