Csis025586.1
Basic Information
- Insect
- Chalcis sispes
- Gene Symbol
- dl
- Assembly
- GCA_949987625.1
- Location
- OX465097.1:18416608-18421352[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-63 3.4e-59 200.9 0.1 1 169 11 182 11 182 0.98 2 2 1.8 1.4e+04 -2.8 0.1 112 130 298 316 291 331 0.50
Sequence Information
- Coding Sequence
- atgaacaataaaaataacggTAATCCTCACGTGAAAATTATAGAGCAACCTTTAAGTAGAGGAGCAAGATTTCGATATGAATGTGAAGGCAGATATTCTGGAAGTATTCGAGGTGTCAACAGTACTTCGCGTAATAAAACTTATCCTTCTATTGAAATTGTAAATCACGAAGGTCCGGCGTTTGTAGTTGTCTCTTGCGTAACAAAAGATTCACCATATCGTCCTCATCCAAATAAATTAGTTGGCAAAGGGAAAGATATATCCCAAGgaatatgttattttaaaattcctgCTAATCAAAAAATCATAAGTTTTTCAAATCTTGgaatacaatatattaaaaaaaaaaatgtaaacgaaTCATTAGTGGAAAGAGAACGGCTGAAAGTGGATCCTTATAGAAcTGGATTCAGACATAGACATAAACCAGAAAGCATTGATTTAAATTGTGTTCGATTATGCTTTCAAGTTTTTGTCGAAGGGCAAGAAAGCGGCAATTTTAATTTACCTTTGAATCCTGTAGTTTCTAATCCAATTtatgataaaaAAGCATCAGCAGAGCTTGCGATTTGTTGGCTTAGTCACGCTTCAGCTACCGCAAGTGGCGGTAACATAATGTGTATTttgtgtgaaaaaatttttaaagatgatGTACAAGTGATATTTTTTGACAAAGAATATGGATGGGAAGAAATCGCAGAATTAACATCGCCTTTTCACCACAAACAAGTTGCAGTGATTTTTAAAACTCCTAAATATTTAAAGGAAGATATTGACAAGCCAGTTACtgtatatattcaattaaaacgaCTTTCCGACGGTGAAATGAGTAAGCCAGTACCTTTTCAATATTTGCCATTAGAAGTCGaaaattacgattctttaagaaaaaagagacaaaaagtcgatgaaacaccaaaaaatttagttttcaaaCATCTACAAGAAGAGTCAGCAACaaTAAACTCAGCCACACAACGGAATTGTGATATTGCAAAAATCAATCCATCGGATTTACCATTACCAGTGGCTGAAGCagttaattcaaaaatatctgCACCATCATTTTATCCTCAACCGAATAACCAAACAAATACATTTAGGAATAAAGTTCTTCTTCCTTCTGGTGGATACCAAAAATCTGGAATATTCGTGGAAGCCGGAATACATGCGAATGAATGGATCGGCCCAGCTACGGTAACATATTTGCTGAGCGAATTTCTCACAAGCGAAGATCCGGAAGTTCACAGACTTGCTATGTCCTATGATTGGTACATGTTTCCGATTTTTAATCCAGATGAATATGTTTATAGTTTTGAGGAGGATAGATTGTGGCGTGAAACACGCGTACCTACCAAAAATGGATGTTTTGGAGTTGATCCAAATAGAAATTGA
- Protein Sequence
- MNNKNNGNPHVKIIEQPLSRGARFRYECEGRYSGSIRGVNSTSRNKTYPSIEIVNHEGPAFVVVSCVTKDSPYRPHPNKLVGKGKDISQGICYFKIPANQKIISFSNLGIQYIKKKNVNESLVERERLKVDPYRTGFRHRHKPESIDLNCVRLCFQVFVEGQESGNFNLPLNPVVSNPIYDKKASAELAICWLSHASATASGGNIMCILCEKIFKDDVQVIFFDKEYGWEEIAELTSPFHHKQVAVIFKTPKYLKEDIDKPVTVYIQLKRLSDGEMSKPVPFQYLPLEVENYDSLRKKRQKVDETPKNLVFKHLQEESATINSATQRNCDIAKINPSDLPLPVAEAVNSKISAPSFYPQPNNQTNTFRNKVLLPSGGYQKSGIFVEAGIHANEWIGPATVTYLLSEFLTSEDPEVHRLAMSYDWYMFPIFNPDEYVYSFEEDRLWRETRVPTKNGCFGVDPNRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -