Basic Information

Insect: Cetonia aurata
Gene Symbol: -
Assembly: GCA_949128085.1
Location: OX421885.1:6468004-6469614[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0027 0.49 12.5 1.8 1 23 131 153 131 153 0.98

2 12 7.4e-06 0.0014 20.6 0.8 3 23 162 182 161 182 0.98

3 12 1.5e-05 0.0028 19.6 1.3 1 23 188 210 188 210 0.99

4 12 0.00024 0.044 15.8 0.2 3 23 218 238 216 238 0.96

5 12 2.6e-06 0.00047 22.0 0.5 2 23 245 266 244 266 0.97

6 12 4.5e-07 8.2e-05 24.4 2.4 1 23 272 294 272 294 0.99

7 12 0.00011 0.02 16.9 1.3 1 23 300 322 300 322 0.95

8 12 7.1e-08 1.3e-05 26.9 0.7 1 23 328 350 328 350 0.98

9 12 9.5e-07 0.00017 23.4 0.2 1 23 356 378 356 378 0.98

10 12 5e-08 9.1e-06 27.4 3.0 1 23 384 406 384 406 0.98

11 12 6.4e-05 0.012 17.6 0.2 1 23 412 434 412 434 0.97

12 12 5.7e-06 0.0011 20.9 0.6 1 23 440 462 440 462 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0027	0.49	12.5	1.8	1	23	131	153	131	153	0.98
2	12	7.4e-06	0.0014	20.6	0.8	3	23	162	182	161	182	0.98
3	12	1.5e-05	0.0028	19.6	1.3	1	23	188	210	188	210	0.99
4	12	0.00024	0.044	15.8	0.2	3	23	218	238	216	238	0.96
5	12	2.6e-06	0.00047	22.0	0.5	2	23	245	266	244	266	0.97
6	12	4.5e-07	8.2e-05	24.4	2.4	1	23	272	294	272	294	0.99
7	12	0.00011	0.02	16.9	1.3	1	23	300	322	300	322	0.95
8	12	7.1e-08	1.3e-05	26.9	0.7	1	23	328	350	328	350	0.98
9	12	9.5e-07	0.00017	23.4	0.2	1	23	356	378	356	378	0.98
10	12	5e-08	9.1e-06	27.4	3.0	1	23	384	406	384	406	0.98
11	12	6.4e-05	0.012	17.6	0.2	1	23	412	434	412	434	0.97
12	12	5.7e-06	0.0011	20.9	0.6	1	23	440	462	440	462	0.98

Sequence Information

Coding Sequence: atggaTGAAATTGCATATTACGATTTAGATAAAATCTGTCGAGTTTGTCTTaaagaaaagcaaaatatgttGTCTCTGAATGATAAAGATAATGCAAGCATGTTTATTTCTTGCACTTCTTTAAATATTGATGAGAAGATGCCTATAAAACTTTGTAGTAAATGCAGAACAAATATGAAcattgcatataattttaagCAATTATGTTTAAAATCACAACAAATATTAGAACAATATCTAGagaatgaacaaaataaattgaataatattACTTGTTTGGAGAACATAGAAGTAAATGAATTGGCAGTAGAAATTgagaaagaaaataagaaaataaatatagtacataAACCAAAAGGAAGGAAAAGGAAAGCAAAACTTGATCGTTCgtttaaatgttctttttgtcCAGAAAGTTTTGACTTAAAATGTGATTTAGATACTCACCTTATTTCACATCCAACAAGTGAAGATGTTGCACTGTGTACTATATGTAATAAGTCATTTTCCAATGCAAGAGTTTTAAAAAGGCATGTAAAAATTCATATGAAAAATAAACCATTTCAATGTGAGGTATGTAAGAACACATATTCCGAATCAGGTAGTTTAACCAGGCATTTAAGAAAACATCGAGGGGAGAAACGTCATCTATGCACAGTCTGTGGGAAAGGTTTCTATGAAGCTAATGTTTTAGCCGTGCACATGAGAATACATACTGGGGAGAAGCCGATAAAATGTGATATTTGTAGCAAACGGTTTTCAGATCCTAATGGTTTAAGAAGTCATTTGAAATCTCACACTGGAGAGAAGAAATATAAGTGTGATATCTGTGATAAATCTTTTGCACATTCGtttgttttaaagaaacatttaagAGTCCATAGTGGTGAAAGACCATACCTATGTTCTGTGTGTGGTAAAAGCTTCACACAGagTCATTATGTCCCAATACATATGAGGCAACATACAGGTGAGCAACCGTTTACTTGTAGTGTTTGTAATAAGGCATTTTCACAGAATAACCAACTGGAAATGCACATGCGAATACATACTGGAGCTAAACCATATATTTGTGCTgtttgtGGAAAACCTTGTACGAGATCGGGCGATTTAGCTATTCATATGAGAAGCCATACCGGTGAGCGACCGTACGCTTGCTCCAAATGTCCAAAACGGTACTCCACGTCCTCTCATTTAACCGTGCACATGCGCACTCATAGTGGCGAGAAGTCGCACGTATGTACTGTATGTGGAAGGGGATTTGCAGAATCCCAGGGATTAAAATCTCATGCACGGGTACACACAGGCGAAAAGCCTTACCAATGCTACATCTGTGGACAGTGTTTTGCGCAGTCTGGCGGGTTAAATGCTCATAATAAAATTCACGGtctcaaaaagtaa
Protein Sequence: MDEIAYYDLDKICRVCLKEKQNMLSLNDKDNASMFISCTSLNIDEKMPIKLCSKCRTNMNIAYNFKQLCLKSQQILEQYLENEQNKLNNITCLENIEVNELAVEIEKENKKINIVHKPKGRKRKAKLDRSFKCSFCPESFDLKCDLDTHLISHPTSEDVALCTICNKSFSNARVLKRHVKIHMKNKPFQCEVCKNTYSESGSLTRHLRKHRGEKRHLCTVCGKGFYEANVLAVHMRIHTGEKPIKCDICSKRFSDPNGLRSHLKSHTGEKKYKCDICDKSFAHSFVLKKHLRVHSGERPYLCSVCGKSFTQSHYVPIHMRQHTGEQPFTCSVCNKAFSQNNQLEMHMRIHTGAKPYICAVCGKPCTRSGDLAIHMRSHTGERPYACSKCPKRYSTSSHLTVHMRTHSGEKSHVCTVCGRGFAESQGLKSHARVHTGEKPYQCYICGQCFAQSGGLNAHNKIHGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00308508;
90% Identity: iTF_00308508;
80% Identity: iTF_00308508;