Caur040506.1
Basic Information
- Insect
- Cetonia aurata
- Gene Symbol
- egg
- Assembly
- GCA_949128085.1
- Location
- OX421889.1:2561694-2570877[-]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.5 3.3e+04 -3.8 0.0 22 35 506 519 501 519 0.77 2 3 0.45 4.2e+03 -1.0 0.1 31 42 722 733 686 736 0.82 3 3 2.9e-15 2.7e-11 44.5 0.0 5 75 763 826 760 828 0.91
Sequence Information
- Coding Sequence
- ATGAATGCATCATCGATGGATATTGAAGTAATTGACGATGATGCACCAGACGATCCGCCCCCGAAGGACGCCGCCCCGGATTCGTCGACAGCTCCCGCGGAAATCGTCGTATTGGACGACGATGCGACAGAATGTGTAACCATAGATTTGGTCCGGCCTGAAATGACCGGGAGCACGAAATGCATCAACTACGCCTGCAAGGGGGGCACTACGATGATAGAACCCCCTGGGTTTTGTCTGAGTTTCTACCGCGTCAAGAATAAACTAACCAAGAAGCAACAGATATGCACCGATTGCTACGATAACGCCGTTGAGCATTACGACCGGCTCGTGGAGGCCCTAACCGATAATAAATCCCTTCTAGAAGTCGAATTGCCTTTTCGAAACGACGTCGTGGAGATCGAGGACTCGGACTCCGACGAGGAAGCCTCGGAAGACGTCTGTTTGAGCGAGGAGACGGTGAAGATGTTGGAAGAGCACTTCGATAGCACGATGAGCGCCGTTTTGAATAAATACGACTTCGATGATCAAGTCGAGAAGGCATATATGTGCTTGAATAAGCGCTGTGAGGATATCAATACTTCGTTTTTGGAGGTTAAAGATATGTTTAAAAGTATAAGATCCGATACCGATCAGATGATTTTCCAATTATCCGATATTTTAAGACCGGATAATGTCGAATTGTTAGCTGTGGATGTGTCTGCAAATAAGCCGACTCGAGTTCCAAGAGTACAACAAGCGAAGCGACAACAAAGATcCACACCTATATCGTCCCCTAAAACACCGAAGGCTGCTGCTGCTGCACAACAACGAGCAAATTCCGTTCAAAAATCTCCGAAACCCGCTCAAACATCTCCGAAACCCACTCAAACACCTTCGAAACCCTCTCAAACACTTCCGAAACTTATTCAGTCTGCTCCGAAACCTTTAGCTCCCAAACTGCCACCTTTAGCTATGGTTACGAAGCCGCCGATTCCATCGACAACATCTCAAGCGGCGACATCACCTCAACTGTCGAGCACATCTCAATCGTCGACGTCACCTCAAACATCGACGACATCTCCTCAAACATTGACGACATCTCAAGTATCGACAACGTCTCAAGTATCGACGCCGAGCGCTACAGAATCAGATTGGAACCTTGTGGTAATGCAAGAATCGCACTTAGATCCGAGTAGCGCGCTCTCCGACGCCCCAGAGCCACCTCCGGCCGATATTCCGTCCAAAGGACCGTTGTTCAAGCCAAATTTGGTTGTGGGCCAACAGTACTACGTCAACCGTCACGAGATCATGGGCGCTTGGGTTCAAGTGACCCTGAAGGAGATCATAACACCCGGGACAAGGCGGGACGGGCAGATTTACACCAACACTATGTACGTGGTCGCCATAGAGAATAGGCTGAAGGTTATCAGGCATAAAATCGTCACGGGAAGGGAGATCGCTTACGGCCAACCGGTCGATGTTCAACTGGACGTCGGCGCTCGCGTTATTGCGGTCTTCAGGGAGAATCTGCTGCCAGAAGATTCCAGTAAGAGGGTCAGGAAAGATGTATTTTATCCCGGGATCGTGGCCGAACCGTTGTTGCAGAGCAATAAGTTCAGgtatttaatatttttcgacGACGGTTACGCGCAATACGTCGACTACAAATTAGTTCACGCGATACGCGATGCTAGCAAAGAAGTTTGGGAGGACGTTAACATAAACTCCAGGGGTTTCATTAAGAAATATCTCGAGAAGTACCCGGAGAGACCTATGGTGAAGCTGCACAAGGGCCAGACGATCAGAACCGAGTATAATGGTAAATGGTGGGTCACTACGGTGATGAACGTGGATTGTTCTCTCGTGCAAATGCTATTCGATGCTTCTGGGAGAGTCGAATGGATTTATCGAGGCTCGACGAGGTTGAATCCCATGTTCAAGGAGGAGCAGGCGATCAGCAATCGTTTGCAACATCGACAGCGCATGACTAGGAAAGCAAATGCTaCGTCGGCCCCTTACGTTGAGTATACACGTCCTCCTACGGACCAATTGGAAAACCATCAGCAGCAACAACAAAGATCAGTTGCTAGGAAAAGCACATCGAGACCTCCTATGTCGAGCAATAATATCACTTACGGTGTCAACCAATTCCTGCCCAGTCCACCGAAGGAAGCCCCGGCTACCAAAATCGTGTATTATACTCCGAGAAGGCAGAAACCGAAGACCAACATCTACGCACCTCACACGTGCAGTTCTACGTGTAAAGATTTCATGTACTGTTCCTTGTCGCGATTGAAAGGTTACAGTCCCTTGTCGAAGCCCCTGTTATGCGGTTTCTATCGCTTGATGTACAAAGCGAAAAACAGGAAATGCGTCGTGTACAAAGCTCCATGCGGTAGGACTTTACGCAGGATGGATGAGGTCCACATGTATTTACGGATAACCAAATCGGATCTGACAGTGGATTTATTCGATTTCAATGTTTACGTTAGGTGCCTAGCCGAGTTCATGGTCGAGCAGAAGAATATACTTATAAAAGATCTATCGCAAGGTAAAGAAGAATGTCCTATCACTGTCGTTAACTACGTTAATTCAGCGCAGTTGAATTTCTGCAACTACTCGACGAAACGAGAACCCATGGCAGGTGTAAATCTAAATACGAATACAGATTTCCTAACAGGATGTGATTGTACGGACGATTGCATTGACAGGAGCAAGTGCTCGTGCTGGCAGTTGACGTTGCAATGTTTGAAGTACATGGATAAAGATACGGACCCTAAATCTGTCGGATATCAATATCGGAGACTGCCAGAGCCAATATTTTCAGGAATATATGAGTGCAATAAACGATGCAAGTGCGCTTCGACGTGCTTAAATAGAGTCGTACAGAATCCCCTCCACCACAAGCTGCAGATCTTCCAGACGGACATGAAGGGGTGGGGAATCCGCTGTTTGAACGACATCCCTCAAGGTTCTTTCATCTGCATTTATGCCGGAGTTCTGCTGACCGAAGACATGGCAAACAGGGACGGCAAATTTTACGGCGACGAATACCTGGCCGAGTTGGATTTCATAGAGACGGCGGAGAGGGCAAAAGAAGATTACGAAGAAGATCCTTATCGCGATGAAGATATGAAGGAGGCGAAGACGCCCGAAGAATCGACCGAAGATAGCGCCCCCGAAGATGAAGACGAAGAGGACGACCCGATAGCCAGGGAAACGGACGATCGGGATTTCGTGCCCACGTTCTCGGCTAAGAGGCACCACAATGAAGATAGCGGAATCCGGACGCGGTTGAGGAAACGACAGGAAGAGGTGGTCGTTAAACAAGAGAAGAGGGCGCCCGTGCCCCCGAGTTTAGTCGAAAACGATGAGACGGTCATGATTAGCGATGATGAGGATTACGCACCTAGGGAACCTTCCAGTTTCAATCCGAAAGATTCAGGTTTAACAGAAGGGGGTGGTACGAAGTATAAATCGATTAGGGAACTGTTCGGTTCGGATGAAGATGTTTACATTATGGATGCGAAGAATACCGGCAACATCGGACGCTTCTTAAACCATTCTTGCTCCCCCAACATCTTCGTACAAAACGTTTTCGTCGACACTCACGATCTAAGATTTCCATGGGTGGCGTTTTTCACTCTAAGCTACGTCAGAGCAGGGACAGAACTGACTTGGAACTACAATTACGACATAGGAAGCGTCACAGGGAAGGAGTTGTCCTGTTATTGCGGTTCCAGCGAGTGCAAAGGCCGattgttataa
- Protein Sequence
- MNASSMDIEVIDDDAPDDPPPKDAAPDSSTAPAEIVVLDDDATECVTIDLVRPEMTGSTKCINYACKGGTTMIEPPGFCLSFYRVKNKLTKKQQICTDCYDNAVEHYDRLVEALTDNKSLLEVELPFRNDVVEIEDSDSDEEASEDVCLSEETVKMLEEHFDSTMSAVLNKYDFDDQVEKAYMCLNKRCEDINTSFLEVKDMFKSIRSDTDQMIFQLSDILRPDNVELLAVDVSANKPTRVPRVQQAKRQQRSTPISSPKTPKAAAAAQQRANSVQKSPKPAQTSPKPTQTPSKPSQTLPKLIQSAPKPLAPKLPPLAMVTKPPIPSTTSQAATSPQLSSTSQSSTSPQTSTTSPQTLTTSQVSTTSQVSTPSATESDWNLVVMQESHLDPSSALSDAPEPPPADIPSKGPLFKPNLVVGQQYYVNRHEIMGAWVQVTLKEIITPGTRRDGQIYTNTMYVVAIENRLKVIRHKIVTGREIAYGQPVDVQLDVGARVIAVFRENLLPEDSSKRVRKDVFYPGIVAEPLLQSNKFRYLIFFDDGYAQYVDYKLVHAIRDASKEVWEDVNINSRGFIKKYLEKYPERPMVKLHKGQTIRTEYNGKWWVTTVMNVDCSLVQMLFDASGRVEWIYRGSTRLNPMFKEEQAISNRLQHRQRMTRKANATSAPYVEYTRPPTDQLENHQQQQQRSVARKSTSRPPMSSNNITYGVNQFLPSPPKEAPATKIVYYTPRRQKPKTNIYAPHTCSSTCKDFMYCSLSRLKGYSPLSKPLLCGFYRLMYKAKNRKCVVYKAPCGRTLRRMDEVHMYLRITKSDLTVDLFDFNVYVRCLAEFMVEQKNILIKDLSQGKEECPITVVNYVNSAQLNFCNYSTKREPMAGVNLNTNTDFLTGCDCTDDCIDRSKCSCWQLTLQCLKYMDKDTDPKSVGYQYRRLPEPIFSGIYECNKRCKCASTCLNRVVQNPLHHKLQIFQTDMKGWGIRCLNDIPQGSFICIYAGVLLTEDMANRDGKFYGDEYLAELDFIETAERAKEDYEEDPYRDEDMKEAKTPEESTEDSAPEDEDEEDDPIARETDDRDFVPTFSAKRHHNEDSGIRTRLRKRQEEVVVKQEKRAPVPPSLVENDETVMISDDEDYAPREPSSFNPKDSGLTEGGGTKYKSIRELFGSDEDVYIMDAKNTGNIGRFLNHSCSPNIFVQNVFVDTHDLRFPWVAFFTLSYVRAGTELTWNYNYDIGSVTGKELSCYCGSSECKGRLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -