Caur032714.1
Basic Information
- Insect
- Cetonia aurata
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_949128085.1
- Location
- OX421887.1:4601957-4605202[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2e-79 1.8e-74 252.4 17.8 88 300 25 242 17 242 0.94 2 2 0.011 3e+02 2.1 0.5 120 162 240 282 240 285 0.89
Sequence Information
- Coding Sequence
- ATGGATTCTCTTAACACTTCACTATTCTACGCGGGTGTAATGCTCTCGAACGGAATTCTGAAATATTTCTGCTTGCAGCATGAACTCAAGGAAGTCGAGGAGAAATTCCGAAAGGCGATGGTGACGAACGCGCAGCTGGACAACGACAAGGCCGCGCAGACATATCAGCTGGAACTACTTAAAGATAGGTTAGAAGAACTGGAAGAGGAACATTCGCAGTTGAAACGGGAACACAGGGACAAGTGCAGAGAGCATGACCAGCTGAAGCGGCTGGCCGCCAGGTTGAAGGAGGAATTGGCTGTGACGAACGCTGAGCTTGAGGAACGGGACAGGCTCATAGCGGAGAAAGGTCTGGTGATTGTTGGCGACGATTCCTTGTGCGAGGAAACGTCGGATGGGGCTGTGAACGGTTTGGGTACGCCAAAGAAGGCTTTGGTTAGTGCCGAAAACGCACAATTGTTGAATTGTGCGGGAGAAGGTAGTCTAGATGTTCGGCTGGCCCGATTCGCGAAAGAGAAGGGCGAACTCCAAGATCAAATTAGTCATCTGAAGTTGGAGCTGGAGGAAGAAAGGAGCAAGCGGCGGAAGTCCAATGCGTCTGGTATCACTCTAAACGGCCCGACGTCTGAAGGAGATTACGATGCTGCGGATATACAAAgaGAAGTCAGCAAACAATTAGCGGAATACAAATTCCGCTCACAGAAAGCTGAGCAGGATGTGGCTACGTTACAGGCAACGGTTGCTAGATTAGAGAGTCAAGTGATTAGATACAAATCGGCCGCGGAGGTTTCCGAAAAATCGGAAGAGGCGCTCAAGGCAGAGAAACGAAAGCTACAAAGAGAGGTCAGTCCTTTATAG
- Protein Sequence
- MDSLNTSLFYAGVMLSNGILKYFCLQHELKEVEEKFRKAMVTNAQLDNDKAAQTYQLELLKDRLEELEEEHSQLKREHRDKCREHDQLKRLAARLKEELAVTNAELEERDRLIAEKGLVIVGDDSLCEETSDGAVNGLGTPKKALVSAENAQLLNCAGEGSLDVRLARFAKEKGELQDQISHLKLELEEERSKRRKSNASGITLNGPTSEGDYDAADIQREVSKQLAEYKFRSQKAEQDVATLQATVARLESQVIRYKSAAEVSEKSEEALKAEKRKLQREVSPL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -