Basic Information

Insect: Cetonia aurata
Gene Symbol: lov
Assembly: GCA_949128085.1
Location: OX421888.1:9021542-9031651[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5.2e-17 7.8e-15 55.9 0.0 1 44 390 433 390 434 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5.2e-17	7.8e-15	55.9	0.0	1	44	390	433	390	434	0.96

Sequence Information

Coding Sequence: atgaCCCAATCGCATTATTCGCTCAGATGGAACAACCATCAGAGTCATATATTGTCTGCCTTCGACGCGTTGCTTCAAGCTGAAACGCTTGTGGACGTGACACTGGTCTGCGACGAGACATCGGTGCGTGCTCATAAAGTCGTCCTGAGTGCCTGTTCGCCCTTCTTCCAGAGGATATTCTCCGAGAATCCCTGCAAGCATCCGGTCATCGTACTGAAGGACTTCAGCGGTTGGGAAGTTCAAGCGATCGTGGACTTTATGTATAAAGGGGAGATCAGCGTCGGCCAAGAACAACTGCAGAGCCTTATCAAAGCTGCTGAGAGTCTGCAAGTGAGGGGATTGGTGCACCAAGATAATTTCGGCATTGACAAGGAGTCCCATTTAATAACGAATCAAACTCCGACGCCTTCGAACTCGCCCAACGATTACGAGCGAAGTTTCTATCCAACGGGTCGTTTCCCCACGCCCGGTATCACGATGAGGACTCCGAATGAGAGGACGTCGCCGTTTTCGCCGTTACCTGGACCAAACTACGATCCGCCTCTGAAATTACCTCACATGTCCCAACTGTCCTTCCCGGAATCTCTGATACCCAGGCCGGACTGTCATTCGCCCATCCCTAGGCGTAAACAAGCGAGACCCAGGCGGAGGTCAGGTGAGATGTGTGGAGCGCAAGACCTAAGCACCAATCCTATAAATAAACCTCCGTCGCCTATCGAAGAGACTGCTGAGAATCTTTGTTTGAAGAAACCCGCGAAAGAGGACTTAAAAATTAGGGAACAAGAAAGGACGAAAACTCCTGAACTTATGGGAAGTCCCGAACTGGATTTGAGTATGCATGGGCTCCATAAGGACTTCACCTCCTCTCCTCCTTTAAGTTTACCGCCGATTTTAAGTTTGAAACCGGATCTAGATAATCATTCTCCTTTGTCCTTTCCTCCTATGCCTTCTGTATCAGCTCTCACGATGACACCACCTCATAGTAAATTTTTCGGTCTGGATTCTCCGCTGGGGCTCTTTCCGCCGGGACTCGACGGCTGTAGAAATCCGCTACTGGAAATGGCCGATCCTCGAACCGCCCCGGAATCGCAACTGttcgttaaaaagaaaaTGGGCCGCCCAAAAGGTCAACATTCAGCACCTCGGGGAGGACCACCAAGGAGCTGGACAAACGCTGAATTAACGGAAGCCCTGCAGCACGTATGGAATAAAAAGATGACGACGAGTCAAGCCTCTAGAATATTCGGCATCCCCTATAACTCTCTCCTAATGTACGTGAGAGGGAAATACGGGAAGAGCCTGAAATTAGAACAGCTGAGGAAAGATTGCATAGGCGGCCCCGGTACGCATATGGACCTTATGGCAATGTCCggtaataacaacaataatccCTGCAAGAACGATAGAGAACCGGATATACAACAGCCGAACACCAGGCCATCTAGTACCGAAGAGCAGAACCCGCAACAGCCGATATTCAACCCGTTCGCGCAGAACTTCTACCCGGATTTCGGAACAGGTTTCCCCATACCGGTTAGCATGATACATCTGTTACCGCAGAGTGAAAAGAACCGCGATCATTACAGACCGCAGCCATCTATAGAGGACGGCTGCAAGAACGACAGAGTCAAAGAGGAACCGCAGGACCTATTTATGAGCGCGGCGCTATCTTGTGAGGACCGTCGAGAACTAGTACAACAAAACGGGCAAGACTAG
Protein Sequence: MTQSHYSLRWNNHQSHILSAFDALLQAETLVDVTLVCDETSVRAHKVVLSACSPFFQRIFSENPCKHPVIVLKDFSGWEVQAIVDFMYKGEISVGQEQLQSLIKAAESLQVRGLVHQDNFGIDKESHLITNQTPTPSNSPNDYERSFYPTGRFPTPGITMRTPNERTSPFSPLPGPNYDPPLKLPHMSQLSFPESLIPRPDCHSPIPRRKQARPRRRSGEMCGAQDLSTNPINKPPSPIEETAENLCLKKPAKEDLKIREQERTKTPELMGSPELDLSMHGLHKDFTSSPPLSLPPILSLKPDLDNHSPLSFPPMPSVSALTMTPPHSKFFGLDSPLGLFPPGLDGCRNPLLEMADPRTAPESQLFVKKKMGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIGGPGTHMDLMAMSGNNNNNPCKNDREPDIQQPNTRPSSTEEQNPQQPIFNPFAQNFYPDFGTGFPIPVSMIHLLPQSEKNRDHYRPQPSIEDGCKNDRVKEEPQDLFMSAALSCEDRRELVQQNGQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00308131; iTF_00464580; iTF_00466515; iTF_00465909; iTF_00465078; iTF_01123863; iTF_01123601; iTF_00434268; iTF_00433962; iTF_00626977; iTF_00627368; iTF_00626318; iTF_00626040; iTF_00065085; iTF_00070224; iTF_00740734; iTF_00740957; iTF_01499007; iTF_01498800;
90% Identity: iTF_00308131; iTF_00626977; iTF_00627368; iTF_00626318; iTF_00626040; iTF_01123863; iTF_01123601; iTF_00434268; iTF_00433962; iTF_00065085; iTF_00070224;
80% Identity: iTF_00308131;