Caur001918.1
Basic Information
- Insect
- Cetonia aurata
- Gene Symbol
- bab1
- Assembly
- GCA_949128085.1
- Location
- OX421882.1:6827184-6836938[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-10 3.3e-08 34.7 0.0 1 35 35 70 35 75 0.92 2 2 1.3e-16 1.9e-14 54.7 0.0 1 43 164 207 164 209 0.95
Sequence Information
- Coding Sequence
- ATGAAAACCCGTATATTCACGAAGCGTGCCAGTCTCAGGCTGGCACGACAATTGATAAATTACGATTATCCCAACTTGCTAAAGCTAAAAACGCCGACGTGGACACAAGAGCAGCTGAAGGAGGCGATACACGCGGTAGCCACGCAGAAGATGCGCTTCACCCAAGCCTCCTCCAAGTACGGCATACCCAAAGGTACGCTTTACGATAATATACTGGGCAAGTCGAAACGGATGGCCGTGCTAGAAGAGGCGGACCTCACTCAAGCGGAAGAGAATGCGGTTTTAGAGTTTTGTTGCGACGTTTCGGTGTCGCCTTACAATAGGCGCACGAAAAAGTCGCTGAAATCCATCTTGGAGTACGTGGAGATGCTCAGAAGACCAGACAGCTATCAGTACCAACTGCAGTCCATGTGGCAGAAGTGCTGGAATACGAACCAAAGTCTAGTGCACAACTTGCGCTTCCGCGAACGTGGCCCCTTGAAGTCTTGGCGGCCGGAAACTATGGCCGAAGCAATCTTTTCCGTGCTGAAGGAAGGACTGTCGTTGTCGCAGGCGGCTAGAAAATACGACATCCCCTATCCGACATTCGTGCTATACGCCAACAGAGTGCACAACATGCTCGGCCCATCTGCGGACGGAGGTTCCGGTAAGTTCCAATACCCAAAAAGTGTTCATACGTTGATTACGCAATTTTGA
- Protein Sequence
- MKTRIFTKRASLRLARQLINYDYPNLLKLKTPTWTQEQLKEAIHAVATQKMRFTQASSKYGIPKGTLYDNILGKSKRMAVLEEADLTQAEENAVLEFCCDVSVSPYNRRTKKSLKSILEYVEMLRRPDSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSGKFQYPKSVHTLITQF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01566162;
- 90% Identity
- -
- 80% Identity
- -