Cten148888.1
Basic Information
- Insect
- Ceriagrion tenellum
- Gene Symbol
- -
- Assembly
- GCA_963169105.1
- Location
- OY720645.1:16763870-16778386[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 5.7 5.3e+03 1.2 0.1 1 19 164 182 164 183 0.86 2 14 3e-05 0.028 17.8 1.7 1 23 308 330 308 330 0.98 3 14 5.5e-07 0.00051 23.3 1.7 1 23 336 358 336 358 0.98 4 14 3.1e-08 2.9e-05 27.2 0.5 1 23 364 386 364 386 0.98 5 14 1.4e-07 0.00013 25.2 0.8 1 23 392 414 392 414 0.99 6 14 8.4e-07 0.00078 22.7 1.2 2 23 421 442 420 442 0.97 7 14 0.00066 0.62 13.6 0.7 1 19 448 466 448 469 0.96 8 14 0.0044 4.1 11.0 0.5 1 23 486 509 486 509 0.95 9 14 0.00029 0.27 14.7 6.9 1 23 637 659 637 659 0.98 10 14 3.9e-06 0.0037 20.6 1.0 1 23 665 687 665 687 0.95 11 14 0.00011 0.1 16.1 0.3 1 20 693 712 693 714 0.95 12 14 0.00013 0.12 15.8 1.4 1 23 795 817 795 817 0.98 13 14 1.1e-05 0.01 19.2 3.5 1 23 823 845 823 845 0.96 14 14 1.3e-06 0.0012 22.0 1.3 1 23 851 873 851 873 0.98
Sequence Information
- Coding Sequence
- ATGAATGTTcttatttgtatttcttttcaGTTGCAGATCAAAGAGGAGGGATATGAGGACTCTGTGGATCGGGACGGGATccgagaggaagaggaggaaggaggaggtggaagagaatCTGCCGGGGAGATGGACCAGGAAGAGGAACCGGAGGAAGAAGAGCCAGAGGAATACGTAACGGACGAACCGAATCCGCCGCACATGGAGTGCCAGACTGCCGACGACTTTGTGAAGACGGAGATGATCCAGGACGATGAGGGCTCCATGCAGGAGAGCTTTATGGCTGGGGATGTTGTTGAGGTGAAGGTTGAAGAGGTGCACGTGGACGATGAGGGAGGTCAGACAAGAGTGGAAGCCGAGAGTATAGTGTGCGGCGGCGTCGAGCCCCGAGGACACCCGACGGTCGGCGGGAACAGGTTGACCGTTTGCGACGGGTCTGCCGAGTTGGATGACCGCGGAGGGAGTGCCCAGGGCGGTGCCAAGGAGGACTTCATGTGCGCCGTGTGCGAGGAGATATTCCTCGACATGCACAGCTTAAGGGGTCACCTGCCGTGCAGCTCCAGCTCGGGCGTGACCCTCGCCGCCGCTGACCACCACCTCGACGGATTCGGCGCCGCGCGGCGGGGGCACTGGGACGGTGTGGGTTTGTTGGACGGCGGcggaggcgggggggaggagtACGCGGTGACCGAGCGGGTGGAAGCGGAGTCTTCGGCCTGCGCGCCCGGGTTCGCCCCGGGTGGCAATCCCCCTCATCCGCAGAGCGCCAACAGCCGACGAGGGCGCGGTGGTGGTGGCGTGGCCAGGGGCGTGAGGGGGAGGAGGCCTGGTCTCGTGGCTCGCCCTCGCAACGTAAAGGGCGTCCCCATCGTCGGCGGCCCCAAGCTCTCCGACAACTTCACCATCGACAAGAAGGTTTCCTTCCAGTGCGACATGTGCCGGCACGGTTTCCCTCGGCTGGACCTGCTGAAGAAACACATCCAGTCCCACTCTGAAGAGGGCGGATACGCCTGCCCAATCTGCCGCAAGAGCTTCCGGACCCGTTGGAGCCTGAAGAACCACAGAAAGTCGCACCAGAAGGTGTCTCAGTACGAGTGTCCGATCTGCGGGCGGAAGTTCTCGCGTCCGCAGCACCTCGAGGCCCACAGGGCGACCCACGGCACGGGGACGGAGTACCAGTGCGGCATCTGCCGCAAGACCTTCCCGCAGAGCAGCTACTTGGAGATGCACCTGAGGACTCACGCGGGGCAGGACGCCACCCAATGTCACATCTGCGGGAAGAGGTTCAGCAACGCGAACGTGCTCAAAGTTCACCTCCGCGTGCACATGGACATCAAGCCGTTCAAGTGCGAGCTGTGCGAGATGCGGTTCGCGCACAAGGCCGAGCTGAAGCAGCACAACCTGTACCCTTGCGAGTCGGCGGAGCCCGGAACCCACTCCATCCAAAGGGGGTCTCACCGCTGCCATCTCTGCGGCGATACCTTCCCGGATGACGGTGCTCTCTCGCGACACGTCGAGGTCCAGCACGGAGAAGTGAGGAGCAAAGGGTTTAAGCCGGATCCCGATCTTCCGTCCCACTCGATGAGCGCCTCGCAACGCAACTCTGCCGACTCCGGCGAGCCTCGCCTCTCGAGTGTGCCCAAACTGAGGGCGGGAGGCGTCGTGCCTCGCGAGAGCCTCAACACGGGAATGAGctacgaggaggaggaggagtcgcTGAGGTTCAAAACGTCGCCGGATTCCGACTCCGAGGCGGAGGCGAAGGCGAGCGTGGACCAGGACCCCGATTTCGTCCCCGGTCTTACCTCTGACGAGTCCGCCTCCACGTCCGACGCGACGTACAGGCCTCCGGAGCTCGGTTCGGCTGACCGCCCGGGCGAATCGGGCGCGGGGACGAAGGTCAGGCCGTACAAGTGTCAGATCTGCCACAAGTGCTTCGGGGAGAAGTGGGAGCTGAACAGTCACCACCGACTGCACACTCAGTCCAACCCGCACGCGTGTTCAGTTTGCGGCAAGCGGTTCACGGAGACGGTGAACTTGCGGAAGCATATGCTCGCCCACGTGGACAGCAGGCCGTTCGAGTGTCCGTTCTGTGCGAAGCCGTTCACGCTGCGGAAGAACTTGAAGCGGCATCTGGAGCTGGAGTCTTGTCTGAAGCGGCTGGATTTCAACGCCAGTGAGTTGGGACCCGCGGGGGGCGTGGCCCAGGGTAGTCGGGATGGACCGGCGTCGAACCCCAACAAGTGCAGTGGAGCGGACGGCGAGGCGTCGACGGGGGAGAACAAACCCGGCAGCTCCCGGACTCTGGACGATATAATGGCGGCCGCGAAAGAGGCGAGCGTCGAGGTTTACCTGGAACAGGAAGGGTCCGTCAGCAGGGTTTTCCCGTGCACCTTCTGCGAGAAGACTTTCCTGCGGACGGACCAGTTGAAGAAGCACCTCATGGTGCACGGTGGCATCAAACCTCACGCCTGCACCCTGTGCAGCCGGCGTTTCACCGAGAAGGGCAACCTGTCCAAGCACATGAAGACTCACGCGTACGAGAAGCCTTATCCCTGCAAGTTCTGCGAGAAAGCGTACACCCAGAAGAAAAATTTGGAGAGGCACTTGCTTTCGCATCAGAGTGATGATGAGTCGGCCGGGTGA
- Protein Sequence
- MNVLICISFQLQIKEEGYEDSVDRDGIREEEEEGGGGRESAGEMDQEEEPEEEEPEEYVTDEPNPPHMECQTADDFVKTEMIQDDEGSMQESFMAGDVVEVKVEEVHVDDEGGQTRVEAESIVCGGVEPRGHPTVGGNRLTVCDGSAELDDRGGSAQGGAKEDFMCAVCEEIFLDMHSLRGHLPCSSSSGVTLAAADHHLDGFGAARRGHWDGVGLLDGGGGGGEEYAVTERVEAESSACAPGFAPGGNPPHPQSANSRRGRGGGGVARGVRGRRPGLVARPRNVKGVPIVGGPKLSDNFTIDKKVSFQCDMCRHGFPRLDLLKKHIQSHSEEGGYACPICRKSFRTRWSLKNHRKSHQKVSQYECPICGRKFSRPQHLEAHRATHGTGTEYQCGICRKTFPQSSYLEMHLRTHAGQDATQCHICGKRFSNANVLKVHLRVHMDIKPFKCELCEMRFAHKAELKQHNLYPCESAEPGTHSIQRGSHRCHLCGDTFPDDGALSRHVEVQHGEVRSKGFKPDPDLPSHSMSASQRNSADSGEPRLSSVPKLRAGGVVPRESLNTGMSYEEEEESLRFKTSPDSDSEAEAKASVDQDPDFVPGLTSDESASTSDATYRPPELGSADRPGESGAGTKVRPYKCQICHKCFGEKWELNSHHRLHTQSNPHACSVCGKRFTETVNLRKHMLAHVDSRPFECPFCAKPFTLRKNLKRHLELESCLKRLDFNASELGPAGGVAQGSRDGPASNPNKCSGADGEASTGENKPGSSRTLDDIMAAAKEASVEVYLEQEGSVSRVFPCTFCEKTFLRTDQLKKHLMVHGGIKPHACTLCSRRFTEKGNLSKHMKTHAYEKPYPCKFCEKAYTQKKNLERHLLSHQSDDESAG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01286700;
- 90% Identity
- -
- 80% Identity
- -