Basic Information

Insect: Ceriagrion tenellum
Gene Symbol: -
Assembly: GCA_963169105.1
Location: OY720645.1:24753972-24756941[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 9.4e-06 0.0088 19.4 3.9 1 21 100 120 100 122 0.94

2 16 7.6e-09 7.1e-06 29.1 0.5 1 23 147 170 147 170 0.98

3 16 2.5e-06 0.0024 21.2 1.0 1 23 173 196 173 196 0.97

4 16 9e-05 0.083 16.3 1.0 1 23 202 224 202 224 0.97

5 16 8.4e-07 0.00078 22.7 0.5 1 23 232 255 232 255 0.97

6 16 6.8e-05 0.063 16.7 0.3 1 23 263 286 263 286 0.95

7 16 1.5e-06 0.0014 21.9 4.5 1 23 292 314 292 314 0.97

8 16 0.00055 0.52 13.8 9.1 1 23 320 342 320 342 0.97

9 16 0.006 5.6 10.6 0.0 2 23 348 369 347 369 0.96

10 16 3.2e-08 3e-05 27.2 1.6 1 23 375 397 375 397 0.98

11 16 8.6e-07 0.0008 22.7 0.7 1 23 403 425 403 425 0.97

12 16 0.00063 0.59 13.6 1.6 3 23 433 453 431 453 0.98

13 16 0.024 22 8.7 1.2 1 23 459 481 459 481 0.96

14 16 2.9e-05 0.027 17.8 1.3 1 23 490 512 490 512 0.98

15 16 1.6e-06 0.0015 21.8 0.2 1 23 518 540 518 540 0.97

16 16 0.013 12 9.5 0.9 3 23 552 573 550 573 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	9.4e-06	0.0088	19.4	3.9	1	21	100	120	100	122	0.94
2	16	7.6e-09	7.1e-06	29.1	0.5	1	23	147	170	147	170	0.98
3	16	2.5e-06	0.0024	21.2	1.0	1	23	173	196	173	196	0.97
4	16	9e-05	0.083	16.3	1.0	1	23	202	224	202	224	0.97
5	16	8.4e-07	0.00078	22.7	0.5	1	23	232	255	232	255	0.97
6	16	6.8e-05	0.063	16.7	0.3	1	23	263	286	263	286	0.95
7	16	1.5e-06	0.0014	21.9	4.5	1	23	292	314	292	314	0.97
8	16	0.00055	0.52	13.8	9.1	1	23	320	342	320	342	0.97
9	16	0.006	5.6	10.6	0.0	2	23	348	369	347	369	0.96
10	16	3.2e-08	3e-05	27.2	1.6	1	23	375	397	375	397	0.98
11	16	8.6e-07	0.0008	22.7	0.7	1	23	403	425	403	425	0.97
12	16	0.00063	0.59	13.6	1.6	3	23	433	453	431	453	0.98
13	16	0.024	22	8.7	1.2	1	23	459	481	459	481	0.96
14	16	2.9e-05	0.027	17.8	1.3	1	23	490	512	490	512	0.98
15	16	1.6e-06	0.0015	21.8	0.2	1	23	518	540	518	540	0.97
16	16	0.013	12	9.5	0.9	3	23	552	573	550	573	0.96

Sequence Information

Coding Sequence: ATGACAATTGTCGTCCGCAGTCACCGCATAGCACCCGGCAGACGACAATTGTCGTCGGTCAGCGTTCAACaaccCAAGGCCAAGCGCCGAAGATTGGAGCCACGTGCTCCTGTGGACAGAGGGAGTGTTTTGAATGGTGTGGACAAAACCGATTTATCAGGAGGAGAAATAGGTGCACCTGAAGTCAAAGATGCAGACAGGAAAAAGCCAGTGAGGGGGAGGAACTCAGTGAAACGAACTGGCAGTATTGTGGTCAGTAAATCGAGAAAGGATTCAGGAATGCCAGAGGTGCCGAAACACAAGTGTAAAGATTGTGGGAAGGTGTTCACCTCAAAGGTATTGTTGGAGAATCATGTGAAATGTCACTCAAGCCAGAATTCAGGTGAGGCTCAGAGTGGTGGACCagtgaggaaggagaaggaaggcaGTCGAACTTCTTACGAGTGCAAAGATTGCGGGAAGCAGTTTCCACAACAAAGAAATTTGAATGCACACATCAGGAAAGAGCACAGGGTCTTCATGTGTGACATATGCCAGAAGGTCTTCAAGCACAAGGCGGCCATACAGACTCACATCAGAAGTGTCCACCTGAAGCTCCGCAACCATTCTTGTGGGGTATGCAGGAGGGCGTTTAGTACCAAGAACCAAGTTGCTTTGcacatgaaaatacataaaaaatcaaaggAGAAATCTCACAAGTGTGGGGACTGTGGAAAAGGGTTCTCTTCGGCCAGGAACGTGAAGATTCACATTAGGAACATCCACCAAAGAGATCAGTGCGAGAGATTCAAGTGTGACCTTTGCCCGAGGGAGTTCCAACGTAAGTCCAGCCTGGATATTCACGTGAAAGGCGTCCACATTGGGGAGAGGAAGTTCGACTGCAAATTATGCCCAAAAACATTCAAGAGAGCGCATCATCTCAATTCTCACATGGGGACTCACACTGGGAGCCATCCTCATGAGTGCAAAATATGCCACAAGACATTCCATTGGCCGAGTCATCTAAAGAAGCACATGGAACGTCACAGTGGAAAGAAGGTGTCCTGTCCCATCTGCTCGAAGGAAGTCTTGGATTCATCATTGCTGCGATCTCACCTTCTGGTGCACTCCAACAAGCGACCTCACCAGTGCAAGGAGTGTCCCAAGGCTTTCAAATCCAAGCCCAACCTGACACTTCACATGCGTGTCCACTCTGGGGACCAACCTCACGAGTGCTCAGTGTGTGGAAAGAAGTTCTCTATCAAATCAAACCTGGGGGTTCACATGCAAATCCACAGAGGGGAGAAGAGGTTTGGTTGCAACATTTGCTCGAGGACATTCCTTCGCAAGAATTCTTTTCAGAATCACATCCTCACACACTCGGACGAGAAGCGATTCCAGTGTGAATTGTGTGGCAAGTGGTTGAAGAGCAAAGCATGTTTACGTGGTCACACTCTTCTGCACACGTCATCCGTGAACGAGAGGCCATTCAAATGTGACATTTGCTCGAAGGCATTCCGGATCAAATCAATCCTCCGCAAGCACATGTCGAGTCACACTGGCGAGAAACCCTATGCATGCCAGGTGTGCTCCAAGGCATTCTCCCAGAAGTCGAACCTCGGGGCACACTTGGTTACTCACGAGGTGGACAGGAATCGCAGAAAAGTCTTCGGTTGTGACAAGTGCAACTTCACAACAGTCAAAAAGGATTATGTGAAGGTTCACATGAAGGCAAAGCATGGGTAG
Protein Sequence: MTIVVRSHRIAPGRRQLSSVSVQQPKAKRRRLEPRAPVDRGSVLNGVDKTDLSGGEIGAPEVKDADRKKPVRGRNSVKRTGSIVVSKSRKDSGMPEVPKHKCKDCGKVFTSKVLLENHVKCHSSQNSGEAQSGGPVRKEKEGSRTSYECKDCGKQFPQQRNLNAHIRKEHRVFMCDICQKVFKHKAAIQTHIRSVHLKLRNHSCGVCRRAFSTKNQVALHMKIHKKSKEKSHKCGDCGKGFSSARNVKIHIRNIHQRDQCERFKCDLCPREFQRKSSLDIHVKGVHIGERKFDCKLCPKTFKRAHHLNSHMGTHTGSHPHECKICHKTFHWPSHLKKHMERHSGKKVSCPICSKEVLDSSLLRSHLLVHSNKRPHQCKECPKAFKSKPNLTLHMRVHSGDQPHECSVCGKKFSIKSNLGVHMQIHRGEKRFGCNICSRTFLRKNSFQNHILTHSDEKRFQCELCGKWLKSKACLRGHTLLHTSSVNERPFKCDICSKAFRIKSILRKHMSSHTGEKPYACQVCSKAFSQKSNLGAHLVTHEVDRNRRKVFGCDKCNFTTVKKDYVKVHMKAKHG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00307086;
90% Identity: -
80% Identity: -