Basic Information

Insect: Ceriagrion tenellum
Gene Symbol: -
Assembly: GCA_963169105.1
Location: OY720645.1:24764140-24765777[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 9.2e-06 0.0085 19.4 2.6 1 20 51 70 51 73 0.94

2 16 4.6e-09 4.3e-06 29.8 0.9 1 23 98 121 98 121 0.98

3 16 3.5e-06 0.0032 20.7 1.9 1 23 124 147 124 147 0.97

4 16 5.4e-06 0.005 20.1 0.9 1 23 153 175 153 175 0.97

5 16 1e-06 0.00094 22.4 0.8 1 23 183 206 183 206 0.96

6 16 1.8e-06 0.0017 21.7 0.2 1 23 214 237 214 237 0.96

7 16 9.9e-07 0.00092 22.5 1.7 1 23 243 265 243 265 0.97

8 16 0.0025 2.4 11.7 9.0 1 23 271 293 271 293 0.97

9 16 0.31 2.9e+02 5.2 0.0 2 23 299 320 298 320 0.93

10 16 4.3e-08 4e-05 26.7 1.5 1 23 326 348 326 348 0.98

11 16 2.7e-07 0.00026 24.2 0.9 1 23 354 376 354 376 0.98

12 16 0.0019 1.7 12.2 0.4 3 23 384 404 382 404 0.98

13 16 0.012 11 9.6 1.0 1 23 410 432 410 432 0.96

14 16 3.7e-05 0.035 17.5 1.0 1 23 441 463 441 463 0.98

15 16 7.8e-08 7.3e-05 25.9 0.4 1 23 469 491 469 491 0.97

16 16 0.011 11 9.7 0.7 3 23 503 524 501 524 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	9.2e-06	0.0085	19.4	2.6	1	20	51	70	51	73	0.94
2	16	4.6e-09	4.3e-06	29.8	0.9	1	23	98	121	98	121	0.98
3	16	3.5e-06	0.0032	20.7	1.9	1	23	124	147	124	147	0.97
4	16	5.4e-06	0.005	20.1	0.9	1	23	153	175	153	175	0.97
5	16	1e-06	0.00094	22.4	0.8	1	23	183	206	183	206	0.96
6	16	1.8e-06	0.0017	21.7	0.2	1	23	214	237	214	237	0.96
7	16	9.9e-07	0.00092	22.5	1.7	1	23	243	265	243	265	0.97
8	16	0.0025	2.4	11.7	9.0	1	23	271	293	271	293	0.97
9	16	0.31	2.9e+02	5.2	0.0	2	23	299	320	298	320	0.93
10	16	4.3e-08	4e-05	26.7	1.5	1	23	326	348	326	348	0.98
11	16	2.7e-07	0.00026	24.2	0.9	1	23	354	376	354	376	0.98
12	16	0.0019	1.7	12.2	0.4	3	23	384	404	382	404	0.98
13	16	0.012	11	9.6	1.0	1	23	410	432	410	432	0.96
14	16	3.7e-05	0.035	17.5	1.0	1	23	441	463	441	463	0.98
15	16	7.8e-08	7.3e-05	25.9	0.4	1	23	469	491	469	491	0.97
16	16	0.011	11	9.7	0.7	3	23	503	524	501	524	0.96

Sequence Information

Coding Sequence: ATGGATTCATCAGAGGGAGAAATAGGTGCACCTAAAGGCAAAGATGCAGACAGGAAGAAGCCAGTGAGGGGGAGGAACTCAGTGAAACGCACTGGCAGTATTGTGGTCAGTAAATCGAGAAAGGATTCAGGAATGCCAGAGGTGCCGAAGCACAAGTGTAAAGAATGTGGGAAGGTGTTCACCTCAAAGGTATTATTGGAGAATCATGTGATATGTCACTCAAGCCAGAATCCTGGTGAGGCTCAGAGTGGTGGATCCAttaggaagaagaaggaaggcggTCGAACTTCTTACAAGTGCAAAGATTGTGGGAAGCAGTTTCCACAACAAAGAAATTTGAATGCACACATCAGGAAAGAGCACACAGTTTTCGTGTGTGACACTTGCCAGAAGGTCTTTAAGCAGAAGGTGCACATACAGTCTCACATCAGAAGCGTCCACCTGAAGGTCCGCAGCCATTCCTGTGGGGTATGTGGGAAGGCGTTTAGTACCAAGAACCTAGCTTCTGTGCACatgaaaacacataaaaaatcaAAGGAGAAATCTCACAAGTGTGGGGACTGTGGAAAAGGGTTCTCTTCGGCCAGGAACATGAAGATTCACATTAAGAACATCCACCAAAGAGATCAGTGCGAGAGATTCAAGTGTGACCTTTGCCCGAGGGAGTTCCAACAGAAGTCCAACCTGGAGATTCACATAAAAGGGGTCCACATTGGGGAGAGGAAGTTCGCCTGCAAATTATGTCCGCAAACATTCAAGAGAGCAGAACATCTCAAGTCTCACATGGGGACTCACACTGGGATCCATCCTCATGAGTGCAAAATATGCCACAAGACATTCCATTGGCCGAATCATCTAAGGAAGCACATGGAACGTCACAGTGGAAAGAAGGTGTCCTGTCCCATCTGCTCGAAGGAACTCTTGGATTCGTCATTGCTGCGACCTCACCTTCTGGTGCACTCGAACGAGCGACCTCACCAGTGTAAGGAGTGTCCCAAGGCTTTCAAAGTCAAGTCCGATCTGACACTTCACATGCGTGTCCACTCTGGGGACAAACCTCACGAGTGCTCAGTGTGTGGAAAGAAGTTCTCTATCAAATCAAACCTGGGGGTTCACATGCGAATCCACAGAGGTGAGAAGAGGTTTGGTTGCAACATCTGCTCGAAGACATTCCTGGCCAAGGTGACTCTTCAGAATCACATCCTCACACACTCGGACGAGAAGCGATTCCAGTGTGAAGTGTGCGGCAAGTGGTTGAAGAGCAAAGCATGTTTACGTGGTCACACTCTTCTGCACACATCAGCTGTGAATGAGAGGCCATTCAAATGCGACATTTGCTCAAAGGCATTCCGGCTCAAATCAATCCTCCAGTCGCACATGTCGAGCCACACTGGCGAGAAACCCTATGCGTGCCAGGTGTGCTCCAAGGCATTCTCCCAGAAGTCGAACCTCAGGGCACACTTGGATACTCACGAGGTGGACAGGAATCGCAGAAAAGTCTTTGGGTGTGACAAGTGTGAATTCACCACAGTCAACAAGTATTACGTGAAGATTCACATGAAGGCAAAGCATGGGAAGGATGAGGACGAGAGTGTTTCAGATGGAACTTCCTCTGGTTCTGATTCTGGAACTAAATGA
Protein Sequence: MDSSEGEIGAPKGKDADRKKPVRGRNSVKRTGSIVVSKSRKDSGMPEVPKHKCKECGKVFTSKVLLENHVICHSSQNPGEAQSGGSIRKKKEGGRTSYKCKDCGKQFPQQRNLNAHIRKEHTVFVCDTCQKVFKQKVHIQSHIRSVHLKVRSHSCGVCGKAFSTKNLASVHMKTHKKSKEKSHKCGDCGKGFSSARNMKIHIKNIHQRDQCERFKCDLCPREFQQKSNLEIHIKGVHIGERKFACKLCPQTFKRAEHLKSHMGTHTGIHPHECKICHKTFHWPNHLRKHMERHSGKKVSCPICSKELLDSSLLRPHLLVHSNERPHQCKECPKAFKVKSDLTLHMRVHSGDKPHECSVCGKKFSIKSNLGVHMRIHRGEKRFGCNICSKTFLAKVTLQNHILTHSDEKRFQCEVCGKWLKSKACLRGHTLLHTSAVNERPFKCDICSKAFRLKSILQSHMSSHTGEKPYACQVCSKAFSQKSNLRAHLDTHEVDRNRRKVFGCDKCEFTTVNKYYVKIHMKAKHGKDEDESVSDGTSSGSDSGTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00307087;
90% Identity: -
80% Identity: -