Basic Information

Insect: Cerceris ruficornis
Gene Symbol: su(Hw)
Assembly: GCA_963989415.1
Location: OZ022524.1:19326803-19329822[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00047 0.082 14.6 0.3 1 20 48 67 48 69 0.94

2 13 1.5e-07 2.6e-05 25.6 0.3 1 23 159 182 159 182 0.97

3 13 1.4e-05 0.0025 19.3 5.4 2 23 189 211 188 211 0.95

4 13 0.00073 0.13 14.0 2.3 1 21 217 237 217 238 0.94

5 13 4.2e-08 7.3e-06 27.3 1.8 1 23 249 271 249 271 0.97

6 13 0.00072 0.13 14.0 0.3 2 23 281 302 280 302 0.97

7 13 0.00038 0.068 14.8 0.5 2 23 309 330 308 330 0.97

8 13 7.6e-06 0.0013 20.2 3.0 1 23 336 358 336 358 0.99

9 13 5.8e-06 0.001 20.6 1.8 1 23 364 386 364 386 0.94

10 13 4e-05 0.0071 17.9 1.1 1 23 392 415 392 415 0.94

11 13 2.2e-05 0.0039 18.7 0.5 1 23 421 443 421 443 0.97

12 13 3.7e-08 6.5e-06 27.5 1.7 1 23 449 471 449 471 0.99

13 13 0.00069 0.12 14.0 1.4 5 23 481 500 478 500 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00047	0.082	14.6	0.3	1	20	48	67	48	69	0.94
2	13	1.5e-07	2.6e-05	25.6	0.3	1	23	159	182	159	182	0.97
3	13	1.4e-05	0.0025	19.3	5.4	2	23	189	211	188	211	0.95
4	13	0.00073	0.13	14.0	2.3	1	21	217	237	217	238	0.94
5	13	4.2e-08	7.3e-06	27.3	1.8	1	23	249	271	249	271	0.97
6	13	0.00072	0.13	14.0	0.3	2	23	281	302	280	302	0.97
7	13	0.00038	0.068	14.8	0.5	2	23	309	330	308	330	0.97
8	13	7.6e-06	0.0013	20.2	3.0	1	23	336	358	336	358	0.99
9	13	5.8e-06	0.001	20.6	1.8	1	23	364	386	364	386	0.94
10	13	4e-05	0.0071	17.9	1.1	1	23	392	415	392	415	0.94
11	13	2.2e-05	0.0039	18.7	0.5	1	23	421	443	421	443	0.97
12	13	3.7e-08	6.5e-06	27.5	1.7	1	23	449	471	449	471	0.99
13	13	0.00069	0.12	14.0	1.4	5	23	481	500	478	500	0.90

Sequence Information

Coding Sequence: ATGGAAAATACAACAACATTGGAGAATTTactcgATTCTGATAACACTCAAACCATTATCGTGTCCAATGGACAAGAATCGGATGAGATCAAAGGTACGGTCATTTCCCAAAGTGGTCAGATCATAGAAATCATAACGGATTATGAGTGTGTAACGTGCCACCGTGTTTTTCAATCACAGGATATGCTGAAGGAACACTTAGATATGTGCAGAGAAGAAGATGACTCCACCAATATCTTAGAGTTagggaatttggaaaattatgactccgaggaggaggaagaagacgaagacGAAGATGAAGATGAAGAGGAAGAAGTGGATAATCCAGATAgcgttattaatattaatatcaaagATTCTAGTTCCAAAAACCAAAAAAATAACAACGATAAGCCAGTAATTGTTCCTGTAAGAGATAATCAGTGCCACTGCTGCACGGAAGATTTGAAAACTGCTCATAGCGGCGGTGAATATAAATGTCCAAATTGTGATTtgtcttttaaaaaaaattcttcattaGAGAGGCACATAATAGTAATTCATTGGAATTGTGACTCTTGTACCTGCAAAGAGTGTGGTACATCGTTTCGGGATAAGAAGTCACTGAATAAACACCGTTACACCACTCACGCGGATAAGAAAATTTATAAATGCGAACCCTGTGATACATATTTCTCGAGAAACTATCATTTAAATCGCCATAAAATGCAGTCCGGTTGTCATGGTAATATTCGTAATACCTTTGACTGCCAAGTATGCAAAAAGGTGTTCACGCGTAAAGATAACTTACGCGAGCATTTACGTACGCACACGGGAACCTCTCTGAGGCAAAAAAAGCCATGTAAATATTGTCCTAAAGAATTCTTTACTGGCCAACAGTTGCTAGTACACGAAAGAGTGCATACAGGGGAACGACCTGTACAATGTGATTTATGCCCAAAAACATTTTTATCGTCTCTCGCGTTAAAAAAGCACCGCCGCGTGCATACTGGAGAAAAACCGTTCGAATGCAAATTTTGTAAGAAAAAGTTCGCTGCCCGAGAAACCTTAAATCGTCATCAACGAACACATACGGGCGAAAAGCCACATGTTTGTCAATATTGCGGAAAATCATTCATTCAAGCAGCTCAATTGAGAGCGCATGTATTCCATCATACCGGTGAGAACGGTTTCTATTGTGACGTTTGTGGAAAAGCATTTAATCGGAAAGCTCGTTTGAACTTGCACAAGAAGTTTGTACACGAAGGTGCAACTCCATTCACTTGCCAAGTTTGTCAAAAGGGATTCATACGACGAGAAGATTTAGTTAAGCACACGTTATTACATACGGGAATTAAACCATTCAAGTGCGATAAATGCTCGAAAGCATTTTCCACAAAGTCCTCCCTGCAGGCTCATTTAAATACTCATAGGCGAGAACCTCCGCAATCGTGCATCGAATGTAACAGGGTGTTCATTCGACAAGATTGCTTAATGAGACATATTAAAGCAAAGCATCGAGAACTCCTCGAAGATGTTATGAACGAGGTTGAAAAGAAGCATTTACAGACGCAATTGTACACCATTGCGTCTATCGCAGCAGAGAAGACGAAGACTGGAGAATCCAGAAATCTCTCTACCGATGATTTGTTAACAGCTATTTACGATCTGTTAAAAATACTCATCGACGAAGAAACTCTCCAGTTATTCGGTTGGCCGGCTGCTCCGATTCAAGATATTCTTGAAGCTGTAATAAGAAGATGCGGCCACGAACCAGTGACTTCCGAAAGTGATTTAATGTTCACTGAACGACTAAGACAGAACGTTAAACTTTTATTTACAGTAGTCATCGAGGATGATGCGGTAAAGTCTCTTTTAACAACGAAAACCGTTGATGACGTTATTCTTCATGTTTTGGAACTTTCGAAGGAGTTTAAAGAAGAATCGTAG
Protein Sequence: MENTTTLENLLDSDNTQTIIVSNGQESDEIKGTVISQSGQIIEIITDYECVTCHRVFQSQDMLKEHLDMCREEDDSTNILELGNLENYDSEEEEEDEDEDEDEEEEVDNPDSVININIKDSSSKNQKNNNDKPVIVPVRDNQCHCCTEDLKTAHSGGEYKCPNCDLSFKKNSSLERHIIVIHWNCDSCTCKECGTSFRDKKSLNKHRYTTHADKKIYKCEPCDTYFSRNYHLNRHKMQSGCHGNIRNTFDCQVCKKVFTRKDNLREHLRTHTGTSLRQKKPCKYCPKEFFTGQQLLVHERVHTGERPVQCDLCPKTFLSSLALKKHRRVHTGEKPFECKFCKKKFAARETLNRHQRTHTGEKPHVCQYCGKSFIQAAQLRAHVFHHTGENGFYCDVCGKAFNRKARLNLHKKFVHEGATPFTCQVCQKGFIRREDLVKHTLLHTGIKPFKCDKCSKAFSTKSSLQAHLNTHRREPPQSCIECNRVFIRQDCLMRHIKAKHRELLEDVMNEVEKKHLQTQLYTIASIAAEKTKTGESRNLSTDDLLTAIYDLLKILIDEETLQLFGWPAAPIQDILEAVIRRCGHEPVTSESDLMFTERLRQNVKLLFTVVIEDDAVKSLLTTKTVDDVILHVLELSKEFKEES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01169316;
90% Identity: -
80% Identity: -