Basic Information

Insect: Cerceris ruficornis
Gene Symbol: -
Assembly: GCA_963989415.1
Location: OZ022528.1:4863276-4872300[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.6e-05 0.0064 18.1 2.4 1 23 450 472 450 472 0.98

2 18 0.0032 0.56 11.9 1.6 1 20 478 497 478 500 0.94

3 18 1.3e-05 0.0023 19.4 1.4 1 23 506 528 506 528 0.98

4 18 7.8e-05 0.014 17.0 4.4 1 21 534 554 534 556 0.95

5 18 1e-05 0.0018 19.8 5.6 1 23 562 584 562 584 0.99

6 18 2.4e-05 0.0042 18.6 5.3 1 23 590 612 590 612 0.97

7 18 9.1e-05 0.016 16.8 6.9 1 23 618 640 618 640 0.96

8 18 8.9e-08 1.6e-05 26.3 2.7 1 23 646 668 646 668 0.98

9 18 6.6e-05 0.012 17.2 6.7 1 23 674 696 674 696 0.97

10 18 2e-05 0.0036 18.8 5.8 1 23 702 724 702 724 0.98

11 18 5.4e-07 9.5e-05 23.8 2.9 1 23 730 752 730 752 0.98

12 18 8.1e-06 0.0014 20.1 7.8 1 23 758 780 758 780 0.98

13 18 2.5e-05 0.0045 18.5 9.1 1 23 786 808 786 808 0.98

14 18 3.3e-05 0.0058 18.2 7.5 1 23 814 836 814 836 0.98

15 18 0.0016 0.28 12.9 8.8 1 21 842 862 842 864 0.94

16 18 1.2e-05 0.0021 19.6 0.4 1 23 870 892 870 892 0.98

17 18 0.029 5.1 8.9 4.5 1 23 902 924 902 924 0.98

18 18 4.7e-07 8.3e-05 24.0 1.3 1 23 930 952 930 952 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.6e-05	0.0064	18.1	2.4	1	23	450	472	450	472	0.98
2	18	0.0032	0.56	11.9	1.6	1	20	478	497	478	500	0.94
3	18	1.3e-05	0.0023	19.4	1.4	1	23	506	528	506	528	0.98
4	18	7.8e-05	0.014	17.0	4.4	1	21	534	554	534	556	0.95
5	18	1e-05	0.0018	19.8	5.6	1	23	562	584	562	584	0.99
6	18	2.4e-05	0.0042	18.6	5.3	1	23	590	612	590	612	0.97
7	18	9.1e-05	0.016	16.8	6.9	1	23	618	640	618	640	0.96
8	18	8.9e-08	1.6e-05	26.3	2.7	1	23	646	668	646	668	0.98
9	18	6.6e-05	0.012	17.2	6.7	1	23	674	696	674	696	0.97
10	18	2e-05	0.0036	18.8	5.8	1	23	702	724	702	724	0.98
11	18	5.4e-07	9.5e-05	23.8	2.9	1	23	730	752	730	752	0.98
12	18	8.1e-06	0.0014	20.1	7.8	1	23	758	780	758	780	0.98
13	18	2.5e-05	0.0045	18.5	9.1	1	23	786	808	786	808	0.98
14	18	3.3e-05	0.0058	18.2	7.5	1	23	814	836	814	836	0.98
15	18	0.0016	0.28	12.9	8.8	1	21	842	862	842	864	0.94
16	18	1.2e-05	0.0021	19.6	0.4	1	23	870	892	870	892	0.98
17	18	0.029	5.1	8.9	4.5	1	23	902	924	902	924	0.98
18	18	4.7e-07	8.3e-05	24.0	1.3	1	23	930	952	930	952	0.97

Sequence Information

Coding Sequence: ATGAATAGTGAGCAGCATGCTTTGCCAGCGACTACGCAGGCACAACAAGAGGATGTAAACGCGGGTCAAAGTGGTCGTCCTTCATACCCAGGTGGTTTGGCTACTGGGACCAGTCTTGGCAATGTAGGGAGTACCCCACATTCATCCGCGGACCTGCGTGTAGGTACAGCCGTAGCGTTAGCCTCCTCGGTAGCTAAGTATTGGGTCCTCACCAATCTGTTTCCTGGACCGCTACCTCAGGTCTCGGTCTATCACCATTCCCACCACAACTCCTCGCATAGGAGTGGTGGAGGTGGAGAGGCATCCTCCAAAGAACCAGCCTCTTCATTGAACCAGGAAATGGCGTTGACTTCTAGCTCTCACCACCAATCAACATCTGCACATCATCATCATCAACCTTCAGTTAGCAGTAGCAGTCATCACAGCTCACTGCAACCAAATCCGCAGATTCCAGTTTCTCTTCCTGGCCTTAATTTAGACGGGGCACATATTCCTGCAAGTGTCAGTCATTTACAAGCAGCACATGCACAAATGCAACAACAAATGCAGGCGCAACAGCAACAGCTGCATCAGCAGCAaccacagcagcagcagcagcagcaacctcaacagcagcaacaacagcaatcACATCATCAGATGCAAAACCATCAAAATGCTCAGAACAGTGGACCAACTGCACACAACCAAAACGCACAGAGAGATGATAACAAAGTAAAAGACGAAGGTGGAAGCTGCACGACCGAACGGTGTAGTGATAATCAAGTGCACTGTCAAGTTCAGTGTGACCTTCAGTTACAGCCGCCGCAAGATTTGCAGCAAAGTCTCatgcagcaacaacagcagcagcagcagcaacaacaaattGGTGTAAATATAAGCGGAAATTCTTCGACCGAAGGTGGAAGTCAGAACAATTCCGAGAAGCccgaaaaggaaaaagaattaCGCCAACTGAATATGACACAATTTCAAGTACCAGATTTAAAACCAGGCGGTCACATGATGGATGTAAGAACAGCTGATGGTTCTGTTGTAAAAATCAGTGCTGGAAACGAACAAGATCTCGCTAAGACCCTTGGTGTCGAAATGGTGCAAAACATGTACAAGGTAAACGTTGAAGACATCAATCAACTCTTGGCATATCATGAGGTTTTCGGAAAACTACAAAGTGAAATAGCAGCTGGTACAACATTAGTTGGAAGCACAGTTCCTACGCAAACAGTTACCACTATACAGAATGGTACTCCGATAGTGCAGCAAGTTCAGTTGAATAAGTTCGATATCAAATCGAGCGACGGTGAAGCAACACCGGGAGCGAGTGCATCACCTGTATCGGTTGGAAGCCATACTTGTGAAATATGTGGGAAGATTTTTCAGTTTCGTTACCAGCTTATCGTACATCGTCGCTATCACACGGAAAGAAAACCGTTCACTTGTCAgGTATGTGGCAAGGCATTTTTAAATGCAAATGACTTGACACGCCATGGAAAGTGTCACTTGGGTGGATCCATGTTTACTTGTACAGTATGCTTTCATGTCTTTGCAAATGCACCATCTCTGGAGCGTCATATGAAAAGACATGCTACCGACAAACCGTACAATTGTACCGTATGTGGTAAAAGTTTCGCGAGAAAAGAACATCTAGATAATCATACACGATGCCATACTGGAGAGACACCTTACAGGTGTCAGTACTGTTCGAAGACATTTACCAGAAAAGAGCATATGGTAAATCACGTACGCAAACACACGGGCGAAACTCCACATCGATGTGATATATGCAAAAAGAGCTTTACTCGCAAGGAACATTTCATGAACCATGTTATGTGGCACACAGGAGAAACTCCACATCATTGTCAAGCCTGCGGCAAGAAATATACGCGTAAAGAACATCTTGCAAATCATATGCGTTCACATACCAATGATACACCATTCCGCTGCGAAATTTGCGGTAAGTCCTTTACGAGAAAGGAGCACTTCACGAATCACATAATGTGGCACACTGGTGAGACGCCGCACCGCTGCGATTTCTGCTCGAAGACGTTCACAAGAAAGGAGCATCTCTTGAACCACGTTCGCCAGCACACGGGTGAGTCTCCACACCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAACCACATCCGCCAACACACAGGAGAGACGCCCTTCCGCTGTCAGTACTGTCCAAAAGCTTTTACGCGGAAAGACCATCTGGTGAACCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACCAAATCCTTCACGAGGAAGGAACATTTGACAAATCACGTGCGTCAACACACAGGCGAATCGCCACACCGATGCCACTTCTGCTCCAAATCATTTACTCGTAAGGAGCATTTGACGAATCATGTACGAATCCACACTGGCGAATCACCGCATAGGTGTGAGTTTTGTCAGAGGACGTTCACTAGGAAAGAACACCTCAATAACCATCTCCGTCAACATACCGGAGATTCTTCACACTGTTGTAACGTGTGTTCAAAACCATTTACAAGAAAGGAGCATCTTGTAAATCATATGCGTTGTCATACTGGTGAACGTCCATTTGTATGCACAGAATGTGGCAAAAGCTTCCCTCTAAAGGGCAATCTACTTTTCCATATGCGTTCGCACAATAAAGGAAGTAATGCCGAACGGCCATTCCGTTGCGACCTCTGTCCAAAAGACTTCATGTGCAAAGGACATTTAGTCTCGCACAGACGATCACATTCGGACGAAAGACCACATAGCTGTCCAGATTGTGGAAAGACTTTTGTCGAGAAAGGCAACATGTTGAGACATTTAAGAAAACATGCAGCGGAAGGACCACCGACTCAAGTTAGCACACCATCAGCCATTCCTCAATCTGGTGTCTTGCCGATACCCGCGGCGGCAGTTTTGGTTGGACATCCATTAGCACCGCCTGCACCACCTGTGGTACCTGTGGTACCACAGCACACGGTGGTTGTACCAACACCTCCTGGTGTGCTAACCTCCTACTAA
Protein Sequence: MNSEQHALPATTQAQQEDVNAGQSGRPSYPGGLATGTSLGNVGSTPHSSADLRVGTAVALASSVAKYWVLTNLFPGPLPQVSVYHHSHHNSSHRSGGGGEASSKEPASSLNQEMALTSSSHHQSTSAHHHHQPSVSSSSHHSSLQPNPQIPVSLPGLNLDGAHIPASVSHLQAAHAQMQQQMQAQQQQLHQQQPQQQQQQQPQQQQQQQSHHQMQNHQNAQNSGPTAHNQNAQRDDNKVKDEGGSCTTERCSDNQVHCQVQCDLQLQPPQDLQQSLMQQQQQQQQQQQIGVNISGNSSTEGGSQNNSEKPEKEKELRQLNMTQFQVPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGSTVPTQTVTTIQNGTPIVQQVQLNKFDIKSSDGEATPGASASPVSVGSHTCEICGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFLNANDLTRHGKCHLGGSMFTCTVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCSKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQACGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCSKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVSTPSAIPQSGVLPIPAAAVLVGHPLAPPAPPVVPVVPQHTVVVPTPPGVLTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00899003;
90% Identity: iTF_00983718;
80% Identity: -