Basic Information

Gene Symbol
ZFX
Assembly
GCA_000503995.1
Location
NW:743484-751342[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 1.2 73 3.2 0.1 3 23 24 44 23 44 0.94
2 15 6.2 3.7e+02 1.0 2.5 1 19 1010 1028 1010 1033 0.74
3 15 0.0068 0.41 10.3 1.1 3 23 1117 1138 1115 1138 0.96
4 15 0.0025 0.15 11.7 0.3 2 23 1151 1172 1151 1172 0.98
5 15 1.3e-05 0.00079 18.9 2.3 2 23 1175 1196 1174 1196 0.97
6 15 0.034 2.1 8.1 0.4 1 23 1202 1224 1202 1224 0.91
7 15 1.8e-05 0.0011 18.4 4.5 2 23 1231 1252 1230 1253 0.95
8 15 0.08 4.8 6.9 3.7 5 23 1266 1284 1265 1284 0.97
9 15 0.38 23 4.8 0.1 12 23 1292 1304 1288 1304 0.87
10 15 0.0074 0.45 10.2 0.3 2 23 1320 1340 1319 1340 0.97
11 15 4.9e-05 0.003 17.0 0.7 1 20 1346 1365 1346 1368 0.92
12 15 6.1e-05 0.0037 16.7 2.7 1 23 1376 1398 1376 1398 0.99
13 15 0.0017 0.1 12.2 3.2 1 23 1404 1426 1404 1426 0.97
14 15 3.1e-06 0.00019 20.8 3.9 1 23 1432 1454 1432 1454 0.99
15 15 0.00022 0.013 15.0 7.2 1 23 1460 1482 1460 1483 0.96

Sequence Information

Coding Sequence
ATGGATCTCAGTACAGCCGTAAGCGCGATGTCGGCCGGGACGACGAGTGGCACCGGGGGAGCAGTCGCCTGCCCCGTGTGCACATTGTACCTGCGCGAGGGCATCAGCTTACAAAAGCACTTGGACACGCATCCCAAGGAGCAGGTGATCGAGGCGCTCATAAGAGCCAGCAGCGGTGGCGGCGCCTCGGCCATCCTAAGCCAGGCGTGCGTGCCGCAGTCTCAACAaccaaCACCAACACCAACACCAACACCAACACCAAcaccaacagcacagcaacagcaacagcaacagcagtcGACTGCGGGCCCGGGTACACATGTTCCTCATGCCCAATCGCCCTACCCGATCGGACCCATATTCGAGTGCCCACCGATCAACGCCATGATACCTCCACCCCAATTTGCTTCGTTTAGCTAccagcaatttattaataatgGTACGATGATGATACCAGCTCAATACGCAATGGCCCAAGCGCAGTCTCCCCAGACGAGCCAGATGATGCAGATGCTGTACAGCCCTTACGGTATGTACCATCAGCAACAGATTCCCACAGTTCAGATGATCTCCGCACCACCGATGATGCCCACCTCCTCGGCGACTCTACCGACGACAGTGCCTGCGATTACGACGCGAATGAGGTCCGCGACGAGCACGAGCAACAACGTCCCGCTGACGGCGATCAACGAGAAGGTGACGACGCCAACGTCGCCACCCGCGCCACTTCCACCTCCTCCGCCCCTGAGGCCAACCTGctcgcagcagcagcagcagcaacaacaacaacaacaacaacaacaacagcagcagcaacagcagcaacaacaacaactcgTCGTTGATTCACCAAAGCAGGCCATAATCCAAGAAGTCATACCGACCTCGGATCGTATACTACCGGATTTAGAAATGCCATTAATGCCCGAAACGTCTCATCCTGACGAAGAGGAGGAACAGAGCGCCGCGCACGCAGAACATCGAGAGCAACGGATTCCGGATAATTGTATGCAAGGAGAACAGCAGCAAGTTATTGAACAATATCAGAGtGAAAATCCATCAACGCTGATGAATAATCCTTGCGATAATAGTACTGATGAGGACAAGACTGAAAGGATTTTGCCAGAAATTGAAGACGATATAGAAATTGAATCTCTAATAGTGCGCGAACCAGGGAAAGtagaaaattacaatgaaattaaagtacaAGAATCGGAAACCGTtgaaaaaatcgaaaattcaATGGGCGAGGAAAATTCGAAAAAAGATGCAGAAAAGACGGACGTAAACGATGAGGAGAGTTGCAAAAAGTTTGAGCAGAAATCTGAAACGCGTTCGCAGGTTGTTATCGAAAGTACAGAGCCTCATGATTTATCAGCCAACGAAACTCGAGTCTCGAATGTTCACGAGCCGGAGGTGGAGCAGCTGAGTCGATTACTGATAAACATGGAGTCTGAATTTAGCGGCGAAAAAGCAGCGAAAAAAGGCAATGAGAAGAGTAGCGAAAGATTTCGGGAAAATATCGACGTCGCTTTACCCAATGAAGCTCAAGAAAAGCATCGCGCCGAGGACGAGAACACGAGTGTATCATATCATAAAAGCAGCACCGAATCGATTGAGTGCAAAATCATAGTGGCTCACGAGGACACGGACGTGTCATCAATCTCCTCGGAGGATTCGATGCAATGCGATTTAGAGATTCAAAAAATCATCACTTCATCCTATCAGTACAAGTATTCCCAATCAACTCCCTGTTTTCCAATTGTTAAAAAGAAGTTACATCGGTCTCTGTCACGAGCATCTCTGCGATCCGACTTTTACCGCTCGAACGAGAATGTTTGTACGGTTGACTTCGAAGCCACCAAATTACAAGACTATCTCAAAGACAATTATAATGACGAGGACATGGAGCTCGAGGAGCTGCAACATCACTCGTACATGAAGCAGAACAACGGTATAATCTTGGAACGTACGAGATCGCACACCTCTTTGTCAGCAAATATGAGTAGTAGTAGTCTTTCGATATTGAAAGCTCGCCGAAGCAAAAGACCGACCTCTCCTTTGTCCGTACATAGCTCCTCGCCATACTGTCaggaagaggaggaggaggaggaggaggaagataCGGATGGTGAAAGTTGCGTTAGTTATCATGCTAATGGAAAGAACGAGGATGAGGAGTTGGAGGAAGATGGACGCCTCCTGTTGAATCAAGAGGGGGAACGCGAGCAAAAGAAGCTCGTTCATCAAGACAATAAGGCTACGATAGCCACTGAGATTATACAACTGCAGGAAAAGTCTGGAGATTATAAATCCCAGAATTTAATATCCGAGTTGTACTCGATCGGGAACTTCCCGCTGGAACATCATTTGTCGAttcaacagcagcagcaacAGTCGACCATTTCCACGCATCACGATGGTTATCCATTATCCGGTAATGCAGTGTCGCAGAATCTTTTAAACATGTCCGAATGCGCTGATCCAACGACTAGTACAGACTCGAAGAGCTACTCCAGCTCGAATAAGTCTTTAATACAGAAGCCAACGACGGAGCTGCTAAATATCAACGAGGATGCGCATGCGGGACCAATGAATGTGCTTGAATACGATGGACTGCAAATTCTTGTACCAAGCACATTTATTAGCGAATCGTCGCAGAAGGCCGTTAGCGGGACGAGTCAGCAATCGATGTCGAGTAGCGAAAACGGAGCCGGAAATGACGAGGAGGTTAAAAGCGTGAATATGCGAGCGGATGAGACGATGCCCCCGAGGGGCGAACTTTCGGAACAAGAGAGTAACGGCTGTACGGAACAGTCGACGTGGCagTCGTACATGGCCCAGGATTTATCGCGCATGTCGACGTCTTACGATCTGATGGCGCGCGAGAGTTGGGAAGAATCCGAGGTATCGGAGCACGAGGACAACAACGTAGGCCCTCTTCTCGACAGCCGCTCACTAGCGACTCATTTCACCTCGAGCCTCTTCCTCGATCGCGATCGCAAGACGCCACCTGGCAGACGCATTTTCAAATGCTCGCATTGTGCGGAAGTGTTCGAGTGCCCGAAGGAGCGACGCGTACACAGTACAATGGTGCACAAGGAGGCTGGACCTTCCGGTTGCGGTTTGGACAACGGCGATCAGCAAGAACTTAAGGACATTAAGATGCTAGACGCCCGCGCAGGTGCCTTCGAGGATATGTTCGTACCCGGCGCACTGCACGCCTACCAAATGCATCAGCAGCCGTTGCTCCACCAGCTCCAGCCGGCCCAGCACTCGAGCTCCACCAAAGTCGAGATCGACGCCAAACTCGATCCCCTCCATCTGTCGACGACGAACGAGGTCATCTGCGGTCTCTGTAGCCAACGCTTCGGCAGCGAAAAATCCTTGCAGATCCATCATAGACGCATGCACGCGATCGAGCCGGTGAAACGGGTTCGCGAGAATGCCAAGTGCCAAATTTGCAGCGAGGAATTTAGCTCGGTAGCGACCTTCAACCTGCATTTGAAAATCCATCCGCTGGAGTGTGGCCAGTGCGGCAAATACTTTTACCGCAAGCAGAATTTCAAACTTCACATGAAGCGGCACTTGGGCATCAAGCCATTTCCCTGCACCGTTTGCGACAAGGCCTTCCTCACCAAGCAGAAGCTCGACGAGCACAATAACGGCCACACGGGCAACGCCCCCGTAAAGTGTAACCTGTGCAACGAGACATTCAGGCGCTACTCGAATCTCACGCAGCACAAGAATCGCCATCACTTGAACATTAAGAAGAAACTAAAGGACTATATATGCCACTGCGGCGAGGTCTTTCACACGAAGAAGAAGCTCGCCTGGCACAAAGAAACGCACGACGAGAAGCCGAAGGCCTGCACCTTGGCGAGCTTGACGCGGCACATGCGTCGCGCCCATAATAGGAGATTCGTCCCCGACGCCCAGAGGGACAGCGAGAACGTGGAGTGCCCAATTTGCAAGTGCATTTACCTCAGGTCCTCCCTCGCAGTGCACATGCGCGTGCACAACGGGGAAAGGCCCTACGAGTGTCAAGTGTGTTCTAAAGCCTTCAGTACTAAGTGGAACTTGCAACTGCACAAGTGGACTCACGCCGCACGCAGTACGAAGCCCTTCAAGTGCAACCAATGCAGCGCGGCCTTCTACAGACACAGCGACTACACAGCGCATATGAATTCCCATAGGAACGTCAGGCCTTATACCTGTAATTACTGTGGTGCTCAATTCATTAGAAAGTACAACTGCCTCCGGCACGTTAAGGAACACGAAGAGAATAAGGCGTACACGTGCGACGTGTGCAATAAGACGTTCCACAGGTCGTATTATCTGAAGGAGCATCTACGAGTGCACTCGGGAGCAAGACCTTACACTTGCCATATATGTGGCAAGTCCAGCAGCACAAAGTCCAATCATAATAAGCACGTTAGGATTCATCATGCTCGCGAGCCTGTAAATACGGAGAATTAA
Protein Sequence
MDLSTAVSAMSAGTTSGTGGAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIRASSGGGASAILSQACVPQSQQPTPTPTPTPTPTPTAQQQQQQQQSTAGPGTHVPHAQSPYPIGPIFECPPINAMIPPPQFASFSYQQFINNGTMMIPAQYAMAQAQSPQTSQMMQMLYSPYGMYHQQQIPTVQMISAPPMMPTSSATLPTTVPAITTRMRSATSTSNNVPLTAINEKVTTPTSPPAPLPPPPPLRPTCSQQQQQQQQQQQQQQQQQQQQQQQQLVVDSPKQAIIQEVIPTSDRILPDLEMPLMPETSHPDEEEEQSAAHAEHREQRIPDNCMQGEQQQVIEQYQSENPSTLMNNPCDNSTDEDKTERILPEIEDDIEIESLIVREPGKVENYNEIKVQESETVEKIENSMGEENSKKDAEKTDVNDEESCKKFEQKSETRSQVVIESTEPHDLSANETRVSNVHEPEVEQLSRLLINMESEFSGEKAAKKGNEKSSERFRENIDVALPNEAQEKHRAEDENTSVSYHKSSTESIECKIIVAHEDTDVSSISSEDSMQCDLEIQKIITSSYQYKYSQSTPCFPIVKKKLHRSLSRASLRSDFYRSNENVCTVDFEATKLQDYLKDNYNDEDMELEELQHHSYMKQNNGIILERTRSHTSLSANMSSSSLSILKARRSKRPTSPLSVHSSSPYCQEEEEEEEEEDTDGESCVSYHANGKNEDEELEEDGRLLLNQEGEREQKKLVHQDNKATIATEIIQLQEKSGDYKSQNLISELYSIGNFPLEHHLSIQQQQQQSTISTHHDGYPLSGNAVSQNLLNMSECADPTTSTDSKSYSSSNKSLIQKPTTELLNINEDAHAGPMNVLEYDGLQILVPSTFISESSQKAVSGTSQQSMSSSENGAGNDEEVKSVNMRADETMPPRGELSEQESNGCTEQSTWQSYMAQDLSRMSTSYDLMARESWEESEVSEHEDNNVGPLLDSRSLATHFTSSLFLDRDRKTPPGRRIFKCSHCAEVFECPKERRVHSTMVHKEAGPSGCGLDNGDQQELKDIKMLDARAGAFEDMFVPGALHAYQMHQQPLLHQLQPAQHSSSTKVEIDAKLDPLHLSTTNEVICGLCSQRFGSEKSLQIHHRRMHAIEPVKRVRENAKCQICSEEFSSVATFNLHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHNNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTLASLTRHMRRAHNRRFVPDAQRDSENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01219241;
90% Identity
-
80% Identity
-