Csol001579.1
Basic Information
- Insect
- Ceratosolen solmsi
- Gene Symbol
- -
- Assembly
- GCA_000503995.1
- Location
- NW:1330373-1367121[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 4.8e-06 0.00029 20.2 1.0 1 23 227 249 227 249 0.98 2 31 0.0021 0.12 11.9 1.9 1 23 272 295 272 295 0.96 3 31 0.0001 0.0062 16.0 0.5 2 23 302 324 301 324 0.96 4 31 0.00056 0.034 13.7 0.9 1 21 344 364 344 365 0.94 5 31 0.0041 0.25 11.0 0.0 2 23 470 491 469 491 0.97 6 31 0.011 0.68 9.6 0.3 1 23 497 520 497 520 0.91 7 31 9.1e-05 0.0055 16.2 0.1 1 23 589 612 589 612 0.96 8 31 0.0061 0.37 10.4 0.4 1 23 618 641 618 641 0.96 9 31 0.092 5.6 6.7 1.5 1 23 654 676 654 676 0.97 10 31 2.7e-05 0.0016 17.8 0.9 3 23 720 741 719 741 0.96 11 31 0.76 46 3.8 0.9 2 23 804 827 803 827 0.93 12 31 2.4 1.4e+02 2.3 0.0 2 23 836 858 836 858 0.84 13 31 0.085 5.1 6.8 0.0 2 23 865 887 864 887 0.94 14 31 1e-05 0.0006 19.2 1.2 1 23 895 917 895 917 0.98 15 31 9.4 5.7e+02 0.4 1.8 2 23 974 997 973 997 0.89 16 31 0.00016 0.0097 15.4 3.3 1 23 1000 1023 1000 1023 0.97 17 31 0.013 0.77 9.4 0.5 2 23 1030 1052 1029 1052 0.95 18 31 0.00054 0.033 13.8 4.8 1 21 1092 1112 1092 1113 0.94 19 31 0.0021 0.12 11.9 1.8 2 23 1127 1148 1126 1149 0.93 20 31 0.61 37 4.2 2.6 1 23 1152 1174 1152 1175 0.95 21 31 0.006 0.36 10.5 0.9 2 23 1182 1205 1181 1205 0.93 22 31 0.74 45 3.9 0.2 2 23 1213 1235 1213 1235 0.95 23 31 2.8 1.7e+02 2.1 0.0 2 23 1242 1264 1241 1264 0.87 24 31 0.17 10 5.9 2.7 2 23 1273 1295 1273 1295 0.96 25 31 0.2 12 5.7 0.8 2 23 1301 1323 1301 1323 0.93 26 31 0.032 1.9 8.2 0.3 1 23 1390 1413 1390 1413 0.96 27 31 0.0098 0.59 9.8 2.0 1 21 1442 1462 1442 1463 0.93 28 31 0.25 15 5.4 1.9 2 23 1551 1573 1550 1573 0.94 29 31 3.1 1.9e+02 1.9 0.9 2 21 1580 1599 1579 1602 0.94 30 31 0.13 7.8 6.3 1.8 1 23 1613 1635 1613 1635 0.97 31 31 0.029 1.7 8.3 0.1 2 20 1643 1661 1642 1663 0.93
Sequence Information
- Coding Sequence
- ATGGAGCAACGCGAAAGGTTCGAGGAGCTCTGCAGGCTTTGCGCCTCCTATGACGCCGTCAAGATGGACATCTTCGGCCAGGAAGGCAAGAACCGCCAACTCGTCGACAAGATACGGACTTGCCTGCCCTTCAAGaTAGCTGAAGATGACAGATTGCCGAAATGCCTTTGCTATAGATGCATGTACAATTTGGAGAACTTCTATGACTTTAGAACGGCTTGCGTCAATGCGGTCGCTCTACTGGAAAGATGCTTACCACCGGAAGAGGCGAAGACGGCCATCAAGCAGGAGGGTGACGATGTTGAGCCGTATTCCGAGTTGCGTATGGAGCTGTTAAAGGATAAGGAGAATATGCCGATGCTCATCCCCGAGGCGTCCGTCGTTAATCCTAATGCAGCCCTTGGTACCCCACCGCGACTTCTCTCTGACGGGGAACACGAGCACGATATGGATGATCTAACCCAGGAGCACGACATGGGTGACGGACTAGGACTGGACGACCAGGACGACCATAAGTCGGACGAGTACGAAATGGACATGGAGACAAATCCAAGCGACTTCCTCGAGATGAGCGCAATGGTACCGGAGGAGGAGCACGTACTGCCCCAGGGCGGCCAAGTTCTCGGGCATCAGCAGGACACGGGCGTCTTCCAGCATCGCAACGAGCAGCACGAGGTCTACGTCTGCTCACTTTGCAATAAGGCCTTCAGCTCGAAGGGCCACCTGTCGCTCCACGCCCGGATTCACGTCGGCGCGGGCGACGTCATCGGCGAAAAGGTCATCACCGACGACCACACATCCTACAAGAGGCCGTACCAGTGCGACCTATGTAACAAGTCCTACTCAACGGCCAAGCATCGCTGGGGACACGTGTCGACGACGCATCGagGCCATCCCGCGGTGACTTGTGGCTACTGCTCGCGCATCTACTCGACACGCACGAACCTCGAGGAGCACATAAAGTCGCGACACGCGGGTCTGCCCCCGCCCCCGGAAATGCCAGTTCCTTATATTCAGCCGGACTCGCGGCACCAGTGCAAAACCTGCCCCAAGATGTACACCAACATCACGGACCTTAATAAGCACAGCCGAGTCTGCCTGGGCGAGCAGCAGCGCAGGGAAATGGCCAATAATAGCACCAACTCCCAGAACTTCGCAAAACTTAAAAATGCATTGGAGCCAAATTCAGATTTATCCAGTATTGATTCAGACTATGAGAACAAAGATTACAAAAGTGCCGAAGCAAAGCTCGCAAAGAATCCTCAATTGACTATTCTTAAGCAAGCTCTTATTAAGGGTGAAAGCGTAAAAAAGGAATACGAGGAAAGGCAGAAAATGTTGAGCAAAGCAAAAAAACAAGCCAATGCGTTCAATAAAGATGGGAGTAATTCAGATGGAAAGAGATGGTATTGCGAAGTGTGCCCCCTGAACTTTGCGATTGCCGATGATCTGAGACAACACGAGAAGACTCACGATGCCGACAAGccttatatatgcattttgtGCGAGAAAGACTTTGTCTTAAAGTCGTCATTGAGCAGGCATATACTGTCCTCCCACGGTGTGGATCCGACGCCACTGATCGAGAGTGATAAGTGCTTGAAAAAGTCAATGCTAGATCCAAATGCACAGCCACTCGTGATAAAAGAGGAACAAAACATTACCAAAGAAAATTCCACATCGCCATTTTCACCAGAtAATATGGAGAACGACGATGACGAGCCAGAAAATGGGAACGACAATATGCTCGAAATAGAGACGGTCTTTGTCTGCGAAATATGTACGCGAGACTTTAATGATCGAGCGTCTCTTTGGCTGCACATTCGAGCAACTCACAAAGAATACGCGGCATTCGCCTGCGGAGTTTGTCTAAAGATTTGCTCCGACAATgcacaattattaaatcatgtcAATATGTATCATGGAGGTTCGAAACTCTTAATGTCCGAACAAAGAAGGTACAGTTGCACGATATGTGGAAGACAGCATGACTCGCGTAAAAAGCTCATAACGCATGTGTCCATTCACAATGTGGATCCGGGATATGATCCCGCGAGCTTTGTACAACTAAATACCAATTACTACAACGAGAACGTCAACAGCAACGAAGGAAATGATCTTATTATGGATTGTGACGACGAGAGCGAAAAGGTGGACTGTTACATTTGCTACAAATCATTCCCAAACGAGGACCACCTCATACGTCATCAACGAAATGCTCACAAATCCGAGCAGATGATTCAGATGGGTGAGTTTGGTGGTAACGGTGCGGCTGCCGGACAGAACGGTACCGGCAATCGCGCCCAGTACCACCTATTCTTCGTTTGCGAGCTTTGCGGAAGCTCGCACCCCAGCAAATGGGAGCGCTGGCTCCACGTCAGCAGCATGCACAGCAACGAGCCGTCCATCAAATGCGAGCGCGACGACTGCGCCAAGATCTTCGCGACGAAGACTCTACGGAACGAGCACGCGCAGCATCACCAGCTTCAGGGCAGTTCGCCCAATACCTGCGAAATATGTGGCAAACTCTGGGGCAGTCGCGTCGACTACTGGAAGCACGTGATGGGCGTGCACTCGGACACGGTGCCCCTCATATGCGGTGTCTGTCTCAAGGTCTTCCCTGACGTGCTGCAGCTCAGCCAGCACGTCAAGATCAAACACTGGCCCCTTACGAACGGTGACTTCAGCTGCGACATTTGCGGCAGGCCCTACTCGAACAAAAGCAAGATGTCGAGGCACAGGAAGATCCACGGTCTCGATGGAGAGGCCTACAATCCGGCCGCGACCAACAGCAGTCTCATTATCAATGACGCGTCGATGAACGATATATCCGacACTTACGAGAATTCAGGGCTACCGGTACCGCTGCAACTCGATAACGGGCTTCCGCAGCCCGTGGAGCCGGCCTCGATCGATCTTAGCTGCGAAATGTGCGGCGACCTCAAATTCCCCTGCCTGGAGGATCTCTGCAACCATCGACGCATGGCCCACAGCCTCTTCCCTTGCGATCTTTGCAACAAGTGCTACGGGCGCACCTCACATCTCTGGAAGCACGTGAACCGCGTGCATAAAGGCCACGAGGACGTCACCTGTCGCTTCTGCCTCAAGACCAGCGCCTCTAAGGATCACCTCGCGGCTCACATTGCCAAGATACACCGATACGAGCCCGAGCTCAAAAGCGAAATAAGGGACGCCATGAGCTACAAGAGTAGCAGCTATAATGCAGCTGCGGCCGCAGCAGCCGCAGCCGCCGCTGCCGAGGACGATGTGCTGCACTTCTGCGAAAAATGCAACAAATCCTTTCATAAGAGGTACCTGCTGCGTCGCCATATGAAAGGTTGCCAAAACTACCGGAAGGATCCGGGGGCCCTGCTGACGCGCTGCCGCGCCTGCGAGCGTATATTCAAGGATCGCGCGAGCTTGCAGAAGCACATCGAGAACCATCACAGCTCGTACGAGTGCCACTTGTGCAAGGAGACGATAACGTCCAAGCTGGGGATAATGACGCACAATCGCGTGCACCATATGCTCCATCCGGACCTCACGTGCGAGCTTGAGAACTGTCGCAAGCTCTTTAGGACTAAGGAGGACCTGGAGTCCCATCGTAAGGATCACAAGCACCATGGCAGTCCGAATGTCTGTGACTTTTGCGGTGACACCGTGGAAAATAAGCTCAAGCTTAAAATGCACATACTGAGCTTGCATAGGAACGAGATTGGCGTATCCTGCGGCGTTTGTCTCATACCTATGAAAGATCCCAAGGATCTGAAAAAACACGTGGAGGATGTCCATGAGAGCGTACTGCTGAAACCGAATACCTGTCagGTGTGCGGTAAGCAGTATGCCTCGAAATGGAAGGCATTCGACCATACGAAGAAGTGCCACGGCAAGGTATTCCGCACCTGTAAACAGTGTCTCGCTGTTTTCACCTCCGACGAGGACCTGCGCTATCACTACGAGCACATACATAACATTCCGAAGGATCAGCTGGACGCGTTCCAGTATAGGCTGGAGGTGGCCGGCAGCAAAATGGACGACTACGACCTCGGACCCCTCGAGGTCGTTGTCAAGGAGGAGCCTGAAGAGCTGGACTTTGACATGGAGCCCTTTGACGAGGACAACTGCAACTCCAACGACTCCAAGAGGCGACGCTCCCTCGGCGACACCTATGACTGCGAGATCTGCCCAGAGATATTCCTCAACCACGAGCTTCTCTCTTCTCACTACCGCAATGTCCACAACACCGACCCCACGCGAATGTTTAAGAAAATGCGACTCGAGCCCGCTGCCAAGACCAAAAAGAAGACTCGCGACCGCGAGAACTACGAGTGCAAGAATTGCCAAAAGCAGTTCTGCACCAAGACGCTGTACCTCGGTCACATAAGTGTGTGCACTCGCAGATCAACGTCGATCCTCGAGGCCCACCTTAAGAACAATAATCAGGTGAAGCGCGAGGATCCCGAACCGGTCCTCTGCGAAACGAATCTCAACATCCCCGACTTCAATCTCTTCGAGGACATAAACATGCAGCTGTCGGGTCAGAAGCCAGTGCCGAGCCTCATGCCCCTCGGTCACTCCTCGTCCAAGTCGTCCAAGTATTCGAGGAAGGATTCGCGTAAGGTTTACGACGAGTCGACCAACACCGAGTGCACTTGCGAGGTCTGCGGCAAGCAGTGGCCCGCCAAGAAACATCTCTGGCAGCATCTCATCAGATTCCACAGGGCCGAGGCGGCAGTCACCTGCGGCGTTTGCCTCAAGCTCTGCGCCACCTACGAGGACCTCGCGGAGCATCTACGCTGCGCTCACCCTGCCATCCTCTCCACCGCGGGCAACAATTTTACCTGCAAGATATGTGGCCGCTATCACAACGCCAGAAGCAAGCTTCTCCTTCACATGAGCATTCACATTAACTGCGCGGCCAACTCCATGTGCCAGCGCTGCAACAGGAGCTTCGAGAACGACGAGAAACTAAAGGAGCACATTGGCGTCTGTCTCGGGGCGCAGAGCGAGGACCACGGTCCCGATAAGCCTATGAAGGACGAGGGCGAGGAGAAGGGAAGTCTTATCGGTGACGAGGACGAGCCCGAGGATAATGAGTACGAGTCCGAGGATGAGGTGGATGAGGAGGACGAGGATGAGGAGAATGAGGATAACGAGAACTCTGAGAACGCCGACAGCAGTTCCGACAAGTCCAACGACTCGGATAGTAATAGCAGTAGTAACAGTAACAGCTCCagcgatgacgatgatgatagcGACGATGACGATAGCAGTAATAGCAAAGACTCGGATAGCgtacagcaacagcagcaacagcagcaacagcagcagcagcagcaacagcagcagcagcagcagcagcacgaTGGGAAGCCTGAAGTCGAAGAGAATGAGACGATGAGCATCGGGgatgatgatgacgaagaGGAGGTCGAGAGTCCCGACGACAAGACTAGGTACGAGGCCATGTCCGAGTCCGAGGACGATGAGAGCTATGACAAGAAGAAACACGAGTCCGTGCTTGCCAGTTATTCGGACGACGAGGGTCCCCCGGCACTTAGCCAGATAATGCCTCTAGTAGTAACGTCGCAGTGCAGCAATGAGCGCCAGATGAACGACAGACAGGATGAGTTGAGCGCTCGACGTCGTGCTCTTGGCAATTCCTTAAGTCGTAAGAAGAATAAGAGCGAGGAAAGCGAGGAGGACAGTAGCGATGTGGAGGAGATTGAAGAAGAGAAAGAAGTCGAAGTCtcggaagaagaggaagaggaagaggtgCAGCAGGCCGAGATCGTTGATCCCAACAGCGCCTTTCACGCAGACAATAACTCAAGGAGCAGTAATGAAGgggaggaggaagaggagGAAGCAGAAGAGCAAGAGGTAGAGGGACAGGAGGAAGAGCAAGAGCAAGTCGAAGAGGGCGAGGAGCAGGAAGACCATATGGAACACGAGGTCgaagaagaggaggaagaaggggcggtggaggaggaggaggaggagcaggagcaggagcaggagcaggaAGAAGGTGTGGAGCATGGTATGAACGAGGAGGAGGTGCTCGAGGTTGACGAAAATGACATGCACAATCTTAATGGCACCGTCCTTATGCTCGCTAACGACGCCGATGGCAATCAGATTCTCATCGAACGCAATATGGCCGATCTTGAGAACGACGACTCGGTCCATGATATGGCCCAATACGTGTTCCAGGATGGCACGGGTTTTGCCCTTGAGGATTATGAGGCAATCGTTGAGAGCCAAGgagacgaggaggaggaggaggaggtggaagATCGGCAACACCACGGTTTCGAGGTGCAAATCGATAATGCGCAAGGCGATGATGAGGACCTCGATGAGCAGGTAGTAGACgatgaggaggaagaggaggagcaCGAGGAGCACGAGGAGCACGAGGAGCAGGAGGGtcaggaggaggaggaggaggaggaggaggtgatgGAAGATCGGCAACACCACGGTTTCGAGGTGCAAATCGATAATGCCAGTGTAAGCAAATTTCACGTTCTGCGAAAGAGGCTAAAGTGA
- Protein Sequence
- MEQRERFEELCRLCASYDAVKMDIFGQEGKNRQLVDKIRTCLPFKIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLPPEEAKTAIKQEGDDVEPYSELRMELLKDKENMPMLIPEASVVNPNAALGTPPRLLSDGEHEHDMDDLTQEHDMGDGLGLDDQDDHKSDEYEMDMETNPSDFLEMSAMVPEEEHVLPQGGQVLGHQQDTGVFQHRNEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRIYSTRTNLEEHIKSRHAGLPPPPEMPVPYIQPDSRHQCKTCPKMYTNITDLNKHSRVCLGEQQRREMANNSTNSQNFAKLKNALEPNSDLSSIDSDYENKDYKSAEAKLAKNPQLTILKQALIKGESVKKEYEERQKMLSKAKKQANAFNKDGSNSDGKRWYCEVCPLNFAIADDLRQHEKTHDADKPYICILCEKDFVLKSSLSRHILSSHGVDPTPLIESDKCLKKSMLDPNAQPLVIKEEQNITKENSTSPFSPDNMENDDDEPENGNDNMLEIETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGVCLKICSDNAQLLNHVNMYHGGSKLLMSEQRRYSCTICGRQHDSRKKLITHVSIHNVDPGYDPASFVQLNTNYYNENVNSNEGNDLIMDCDDESEKVDCYICYKSFPNEDHLIRHQRNAHKSEQMIQMGEFGGNGAAAGQNGTGNRAQYHLFFVCELCGSSHPSKWERWLHVSSMHSNEPSIKCERDDCAKIFATKTLRNEHAQHHQLQGSSPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVLQLSQHVKIKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDGEAYNPAATNSSLIINDASMNDISDTYENSGLPVPLQLDNGLPQPVEPASIDLSCEMCGDLKFPCLEDLCNHRRMAHSLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCRFCLKTSASKDHLAAHIAKIHRYEPELKSEIRDAMSYKSSSYNAAAAAAAAAAAAEDDVLHFCEKCNKSFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYECHLCKETITSKLGIMTHNRVHHMLHPDLTCELENCRKLFRTKEDLESHRKDHKHHGSPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDVHESVLLKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTSDEDLRYHYEHIHNIPKDQLDAFQYRLEVAGSKMDDYDLGPLEVVVKEEPEELDFDMEPFDEDNCNSNDSKRRRSLGDTYDCEICPEIFLNHELLSSHYRNVHNTDPTRMFKKMRLEPAAKTKKKTRDRENYECKNCQKQFCTKTLYLGHISVCTRRSTSILEAHLKNNNQVKREDPEPVLCETNLNIPDFNLFEDINMQLSGQKPVPSLMPLGHSSSKSSKYSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCATYEDLAEHLRCAHPAILSTAGNNFTCKICGRYHNARSKLLLHMSIHINCAANSMCQRCNRSFENDEKLKEHIGVCLGAQSEDHGPDKPMKDEGEEKGSLIGDEDEPEDNEYESEDEVDEEDEDEENEDNENSENADSSSDKSNDSDSNSSSNSNSSSDDDDDSDDDDSSNSKDSDSVQQQQQQQQQQQQQQQQQQQQQHDGKPEVEENETMSIGDDDDEEEVESPDDKTRYEAMSESEDDESYDKKKHESVLASYSDDEGPPALSQIMPLVVTSQCSNERQMNDRQDELSARRRALGNSLSRKKNKSEESEEDSSDVEEIEEEKEVEVSEEEEEEEVQQAEIVDPNSAFHADNNSRSSNEGEEEEEEAEEQEVEGQEEEQEQVEEGEEQEDHMEHEVEEEEEEGAVEEEEEEQEQEQEQEEGVEHGMNEEEVLEVDENDMHNLNGTVLMLANDADGNQILIERNMADLENDDSVHDMAQYVFQDGTGFALEDYEAIVESQGDEEEEEEVEDRQHHGFEVQIDNAQGDDEDLDEQVVDDEEEEEEHEEHEEHEEQEGQEEEEEEEEVMEDRQHHGFEVQIDNASVSKFHVLRKRLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00845386;
- 90% Identity
- -
- 80% Identity
- -