Basic Information

Insect: Ceratosolen solmsi
Gene Symbol: -
Assembly: GCA_000503995.1
Location: NW:3507194-3538889[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 6.3e-05 0.0038 16.7 1.4 1 23 446 468 446 468 0.96

2 18 2.6e-06 0.00016 21.0 1.9 1 20 474 493 474 496 0.94

3 18 2.1e-05 0.0013 18.2 0.7 1 23 502 524 502 524 0.98

4 18 5.1e-05 0.0031 17.0 4.4 1 21 530 550 530 552 0.95

5 18 1.6e-05 0.00096 18.6 4.6 1 23 558 580 558 580 0.99

6 18 1.6e-05 0.00096 18.6 5.3 1 23 586 608 586 608 0.97

7 18 6e-06 0.00036 19.9 7.1 1 23 614 636 614 636 0.97

8 18 5.9e-08 3.5e-06 26.2 2.7 1 23 642 664 642 664 0.98

9 18 4.3e-05 0.0026 17.2 6.7 1 23 670 692 670 692 0.97

10 18 1.3e-05 0.00081 18.8 5.8 1 23 698 720 698 720 0.98

11 18 3.6e-07 2.2e-05 23.8 2.9 1 23 726 748 726 748 0.98

12 18 5.3e-06 0.00032 20.1 7.8 1 23 754 776 754 776 0.98

13 18 1.7e-05 0.001 18.5 9.1 1 23 782 804 782 804 0.98

14 18 2.2e-05 0.0013 18.1 7.5 1 23 810 832 810 832 0.98

15 18 0.00062 0.038 13.6 8.8 1 21 838 858 838 860 0.94

16 18 8.1e-06 0.00049 19.5 0.4 1 23 866 888 866 888 0.98

17 18 0.019 1.2 8.9 4.5 1 23 898 920 898 920 0.98

18 18 3.1e-07 1.9e-05 24.0 1.3 1 23 926 948 926 948 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	6.3e-05	0.0038	16.7	1.4	1	23	446	468	446	468	0.96
2	18	2.6e-06	0.00016	21.0	1.9	1	20	474	493	474	496	0.94
3	18	2.1e-05	0.0013	18.2	0.7	1	23	502	524	502	524	0.98
4	18	5.1e-05	0.0031	17.0	4.4	1	21	530	550	530	552	0.95
5	18	1.6e-05	0.00096	18.6	4.6	1	23	558	580	558	580	0.99
6	18	1.6e-05	0.00096	18.6	5.3	1	23	586	608	586	608	0.97
7	18	6e-06	0.00036	19.9	7.1	1	23	614	636	614	636	0.97
8	18	5.9e-08	3.5e-06	26.2	2.7	1	23	642	664	642	664	0.98
9	18	4.3e-05	0.0026	17.2	6.7	1	23	670	692	670	692	0.97
10	18	1.3e-05	0.00081	18.8	5.8	1	23	698	720	698	720	0.98
11	18	3.6e-07	2.2e-05	23.8	2.9	1	23	726	748	726	748	0.98
12	18	5.3e-06	0.00032	20.1	7.8	1	23	754	776	754	776	0.98
13	18	1.7e-05	0.001	18.5	9.1	1	23	782	804	782	804	0.98
14	18	2.2e-05	0.0013	18.1	7.5	1	23	810	832	810	832	0.98
15	18	0.00062	0.038	13.6	8.8	1	21	838	858	838	860	0.94
16	18	8.1e-06	0.00049	19.5	0.4	1	23	866	888	866	888	0.98
17	18	0.019	1.2	8.9	4.5	1	23	898	920	898	920	0.98
18	18	3.1e-07	1.9e-05	24.0	1.3	1	23	926	948	926	948	0.97

Sequence Information

Coding Sequence: atgAATAGTGAGCAGCATGCTCTGCCAGCGACAACGCAGGCTCAACAAGAGGAAGTAAGCGTGGGTCAAAGCGGTCGCCCCTCGTATCCAGGTGGTTTGGCAACTCCGACAAGCCTTGGCAATGTAGGGAGCAATTCTCATTCATCCGCGGACCTACGTGTAGGTACAGCTGTAGCATTAGCCTCCTCGGTAGCAAAGTACTGGGTCCTCACCAATCTTTTCCCTGGGCCGATACCACAGGTATCAGTGTATCATCATCCTCATCACAGAGCTGGTGCTGGAGGTGGTGAAGCTCCAACAACAACCAAAGATTCAGCAGCATTGTTGAACCAAGATATGTCATTAACTTCTGGTACACACCATCAGACACCAACTTCGCACCATCATCAGCCTTCGGTCAGTAGGAGTAGTCATCATAGCTCCCTGCAGACCACTGCACAGATTCCAGTCTCTTTGCCGGGACTTAATCTTGATGGAAGTCACCTTCAAGCAAGTGTAAGTCACTTGCAAGCAGCGCATGCCCAAATGCAGCAACAAATGCAGtcacagcaacagcaacagcagcagcagcagcagcagcagcagcagcagcagcaaacACAGTTGcatcagcaacaacagcaacaggcCCAATCTCATCATCAGATGCAGAATCATCAGAATGCACAAAATACAGGTCAAACCAGCCAGAATCAGAGCTTATCCAGGGACAACAAGCCTAAGGAAGAGACATCGGATCGTTGTAATGACAATCAGGTCCACTCTCACGTTCAACGTGACCACCAACATCAGCAAGCACAAGATATACAACAAAGTCTAAtgcatcagcagcagcaaatTGGTGTGAGCATCGGAGGTGCTTCTGCTGCAGATGGTGCTCCCTCAAGTGGAGTGGATAAAgttgaaaagaaagaagataTACGTCAATTAAATATGACCCAattTCAAGTACCTGATCTGAAATCAGGAGGTCACATGATGGATGTTAGAACAGCGGATGGATCTATTGTTAAAATCAGCGCTGCTAATGATCAAGATCTTGCAAAAACATTAGGAGTCGATATTTCTCAGTACATCAATAAGGGAGCCGTGAACGTCGAGGAGTTGAATCAGATAAATCAGCTGCTGGCGTATCACGAAGTTTTTGGAAAGTTGCAGAGCGAAATAGCCGCTGGTACCACGTTGATTGGTGGCACAGTACCAACGCAGACGGTCACAACGATACAGAACGGCACGCCCTTAGTGCAACAAGTGCagctaaataaatttgacataAAGACGAGCGATGGTGAGGTGACGCCAGGTCCAAGTGGTTCGCCCGTGTCCGTAGGCAGTCACGCCTGCGAGGTTTGTGGCAAGATCTTTCAATTTCGCTATCAGCTGATCGTCCATCGAAGATACCATACGGAAAGAAAGCCTTTTACTTGTCAGGTATGCGGCAAGGCATTTACAACTGCAAGTGATTTAACGCGTCATGGAAAATGCCACTTAGGTGGTTCCATGTTTACTTGTGCTGTTTGCTTCCATGTTTTCGCTAATGCCCCGTCATTAGAGCGACACATGAAGCGTCATGCCACCGACAAGCCATACAATTGTACGGTTTGCGGCAAAAGTTTTGCCAGAAAAGAGCATCTTGATAATCACACAAGGTGCCATACGGGAGAAACTCCATACAgaTGTCAGTATTGCGCCAAAACTTTCACGCGCAAGGAACATATGGTGAATCATGTACGTAAGCATACAGGAGAAACTCCTCATCGCTGcgatatttgcaaaaaatctTTCACGCGCAAGGAGCACTTTATGAATCACGTGATGTGGCACACTGGCGAGACACCCCATCACTGTCAAGTTTGTGGCAAGAAATATACCCGCAAGGAGCATTTGGCCAATCATATGCGCTCCCATACCAACGACACGCCATTCCGTTGTGAGATTTGCGGCAAGTCGTTCACGCGTAAGGAGCACTTCACGAATCACATAATGTGGCACACCGGCGAGACGCCGCATCGCTGCGACTTTTGCTCGAAGACGTTCACGCGGAAGGAGCATCTGCTGAATCACGTCAGGCAGCACACGGGTGAGTCACCACACCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAACCACATCCGCCAACACACAGGAGAGACGCCCTTCCGCTGCCAGTACTGTCCGAAAGCGTTTACGCGGAAGGACCACCTGGTGAACCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACGAAATCCTTCACGCGGAAGGAACATTTGACAAATCACGTGCGTCAACACACAGGCGAGTCGCCCCACCGCTGCCACTTCTGCTCCAAGTCCTTCACCAGGAAGGAACATTTGACGAACCACGTGCGCATTCACACTGGCGAGTCGCCCCATCGCTGCGAGTTCTGTCAGCGCACCTTCACGCGCAAGGAACATCTCAACAACCACCTTAGGCAGCACACCGGCGACTCGTCGCACTGCTGCAACGTCTGTTCCAAGCCCTTCACCCGCAAGGAGCATCTGATAAATCACATGCGCTGCCACACGGGCGAGCGACCATTCGTGTGCACCGAGTGCGGCAAGAGCTTCCCCTTGAAGGGCAACTTGCTCTTCCATATGCGCTCGCATAACAAGGGCAGCCAAGCCGAGCGCCCGTTCCGCTGCGACCTCTGCCCCAAGGATTTCATGTGCAAGGGCCATCTTGTCTCCCACCGGCGCTCCCACTCGGACGAGCGACCTCACAGCTGCCCGGACTGTGGCAAGACCTTCGTCGAGAAGGGCAACATGCTGCGGCACCTACGTAAACACGCGGCCGAAGGCCCACCCACGCAGGTTGGCAGCGCCGCTTCGGCCCTCGCCGGAGGGGCGGCTCAACAGCCGGGAGCCGCTGGTGCCGGTACCGGTGCCGGCGGTGCTGGTgccggtggtggtggcggcggggCCGGTGGTGCTGGGGGCCTACCCCTACCGTCGGCTGCTGCCGCTGCGGCGGCAGTCCTCGTCGGACATCCTCTAGCACCGCCCCCGGCTCCTGCCGTCGGCTTACCCCAACACACGGTCGTCGTACCTACACCTCCGGGTGTTCTCGCCTCCTACTGA
Protein Sequence: MNSEQHALPATTQAQQEEVSVGQSGRPSYPGGLATPTSLGNVGSNSHSSADLRVGTAVALASSVAKYWVLTNLFPGPIPQVSVYHHPHHRAGAGGGEAPTTTKDSAALLNQDMSLTSGTHHQTPTSHHHQPSVSRSSHHSSLQTTAQIPVSLPGLNLDGSHLQASVSHLQAAHAQMQQQMQSQQQQQQQQQQQQQQQQQTQLHQQQQQQAQSHHQMQNHQNAQNTGQTSQNQSLSRDNKPKEETSDRCNDNQVHSHVQRDHQHQQAQDIQQSLMHQQQQIGVSIGGASAADGAPSSGVDKVEKKEDIRQLNMTQFQVPDLKSGGHMMDVRTADGSIVKISAANDQDLAKTLGVDISQYINKGAVNVEELNQINQLLAYHEVFGKLQSEIAAGTTLIGGTVPTQTVTTIQNGTPLVQQVQLNKFDIKTSDGEVTPGPSGSPVSVGSHACEVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFTTASDLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCSKPFTRKEHLINHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSQAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVGSAASALAGGAAQQPGAAGAGTGAGGAGAGGGGGGAGGAGGLPLPSAAAAAAAVLVGHPLAPPPAPAVGLPQHTVVVPTPPGVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00286639;
90% Identity: iTF_00969825;
80% Identity: -