Csol004303.1
Basic Information
- Insect
- Ceratosolen solmsi
- Gene Symbol
- DMRT2_1
- Assembly
- GCA_000503995.1
- Location
- NW:16253295-16255730[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-25 3e-22 77.3 12.8 1 47 36 82 36 82 0.99 2 2 1.8 4.2e+03 -3.2 0.1 37 45 116 124 114 125 0.75
Sequence Information
- Coding Sequence
- ATGAAAAGTCATGGCGATGCTGGtacatcaaattttcaaattggaGACAAAGGATTATCGTCCGACTTGGTAGAAGAAGTCATTGTCTCTCCACCATGTCGCACGCGTAGCCCAAAGTGCGCCAGGTGTCGTAACCATGGAGTCGTATCGGAATTAAAGGGCCACAAACGGCTATGCACGTGGAAGAACTGTCACTGTCCTTGTTGTCTGCTGGTGGTCGAGAGGCAACGAGTGATGGCAGCTCAAGTGGCGTTGCGTCGACAGCAACAGGCACGAGACAACCTGGAAGGAGCCAGGGTATCCCTAGGGACAACTATTATGAACGACACTGGAAAGTATAATCATGTCCAGAATCGACAGAGGGCAATAGCAGCTTATCAACGCAGACTTCGGAATTTTGAGCGCCATAGGGTACAGCTGGATCGGCATCCTGGACAGAAAAACGTCAACCAAGACATTCGTATCTTGAATAATCTTCCTGATCATCCAGACTATGTCTCAAGATCAATTATAATGACAGAGACTGATCAGAATAATAAACAGAGCaaatcgttaattaaatttcataatacatgTTCAACGTATCCACAAATACCTTTGTTTTCATGTATAGCAAATACACCAAGTATAACATCACATTTAAATGACGGCACATcgTAG
- Protein Sequence
- MKSHGDAGTSNFQIGDKGLSSDLVEEVIVSPPCRTRSPKCARCRNHGVVSELKGHKRLCTWKNCHCPCCLLVVERQRVMAAQVALRRQQQARDNLEGARVSLGTTIMNDTGKYNHVQNRQRAIAAYQRRLRNFERHRVQLDRHPGQKNVNQDIRILNNLPDHPDYVSRSIIMTETDQNNKQSKSLIKFHNTCSTYPQIPLFSCIANTPSITSHLNDGTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -