Csol001845.1
Basic Information
- Insect
- Ceratosolen solmsi
- Gene Symbol
- -
- Assembly
- GCA_000503995.1
- Location
- NW:3757100-3983863[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.66 6.1e+03 -4.9 7.7 133 176 33 74 11 132 0.49 2 3 2.2e-06 0.02 13.2 0.0 44 120 127 205 124 217 0.67 3 3 4.2e-10 3.9e-06 25.4 0.3 323 381 272 331 261 368 0.86
Sequence Information
- Coding Sequence
- ATGCCGTCGTCCGCTGGTTATTACGACGACAGGAATCCGCTCCTCAAGGGCACCCTATCCAGCGTGGATCGGGACCGGCTTCGCGAGCGGGAACGACAGGCCCGGGTGGCTATGTCGGTCCAGGCGGAGCAGGCGGCTGGACGGGGCGCCTCCGACACCCGTCACGGGCACCACCACCACGGCCATCACAATCACGGCCAATCCCGCCACGGCCGCTCTCGCCCTTGCTCCAGTCAGGGTAAGTCTTTAGCCAATTGTATTGTTGAAGATAGAGGCATGGAACATGGGGCGAACGCCGATCGTGTCACGAGGATTCACGGACGCAGCACTAACGCTAGTCGACCTCATTACGTTCCTCAGGTGAACCCGGACGCCCACGACCGCACGACCCAACAGATCCAATCGAAGCTGGGCAACTACTCACTGGTGAAGCACCTTCTGGATGAGCCCAAGAGGCTGATCGGCATTGAGGGTGTACCCGCGAGCCCGGCTCCGGTGAGTTCGGGCCATCCGCGGCTGCCCTCCAGTCGTGGTTCGCCCTCCTCCGCCCAAGAGTTCAAGAAGCCCGGGGCCTCCGTGACTGGAGCCCCGATACCAGCACCTTCCGTCACCTCCTCGCAGCGGGGCGGCTTCATCAAACCCGCGGACGGGAAGCCACCGTACGGGGGCAGGGGCGGTTATCCGGGACAACCGGTGAAGCACGGGGGCAGCAGCGGGGAACACCGGAGTCACGGCCTCATACCGGCCAAGGGACCTCCGACACCGACGCCCGTCGGACCCCCACCTGCACCTGGTATCCAGAACAGGCTACACACCGCCAGCGTGAGGTTGCCCAAGCTGCCCATTGACGCCGGATCGAGTTCCCGGCATTTGAGTGCCGATAGCACTGCAGAGGTGGAAACCATCTTAAAGgaAATGACAATGCCTCCAACGCCTTTGACTGCAATTGCTCAAACACCCAGAAAAGAATTGGAATCTAAGTTTACCTTCAATCCTGTTCTTGCTAAGACCGATGACTATTACGACGACACACTTTCGTCGTGGAGGAACAGCGCGAGTCAAGCAGACAAGGACCTCTCGAGACTCTCGGGAACCCAAACAGAATGCGCCATCTGTCGCGGCACCTGCGAACCgattTATTGCGACATGACGCCGGAGAGTccaaatataagtataaagaaCAATGAAGAACTGAAGAACGGTAAatag
- Protein Sequence
- MPSSAGYYDDRNPLLKGTLSSVDRDRLRERERQARVAMSVQAEQAAGRGASDTRHGHHHHGHHNHGQSRHGRSRPCSSQGKSLANCIVEDRGMEHGANADRVTRIHGRSTNASRPHYVPQVNPDAHDRTTQQIQSKLGNYSLVKHLLDEPKRLIGIEGVPASPAPVSSGHPRLPSSRGSPSSAQEFKKPGASVTGAPIPAPSVTSSQRGGFIKPADGKPPYGGRGGYPGQPVKHGGSSGEHRSHGLIPAKGPPTPTPVGPPPAPGIQNRLHTASVRLPKLPIDAGSSSRHLSADSTAEVETILKEMTMPPTPLTAIAQTPRKELESKFTFNPVLAKTDDYYDDTLSSWRNSASQADKDLSRLSGTQTECAICRGTCEPIYCDMTPESPNISIKNNEELKNGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -