Csol004629.1
Basic Information
- Insect
- Ceratosolen solmsi
- Gene Symbol
- bab2
- Assembly
- GCA_000503995.1
- Location
- NW:6734114-6864893[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8e-13 8.2e-10 37.3 0.0 1 39 504 543 504 547 0.90 2 4 6.4e-12 6.6e-09 34.4 0.0 2 39 559 596 558 599 0.94 3 4 9e-19 9.2e-16 56.4 0.0 2 45 614 658 613 658 0.97 4 4 1e-18 1e-15 56.2 0.1 1 42 665 707 665 708 0.97
Sequence Information
- Coding Sequence
- ATGCCGATCGGGAACAGCAACGGGCACCGGCGCGCCACTGAGGAGCGCCCCCGGGTCTGCCAGCCATTATTCGCCAGCTTAGCGTGCGAGCAAAAGCAGGGAAAACGGGACTCCTCGAGGACGACGAGGCTGCGCCGAGTCGCGAGACCGCGCACACCATGCGGAGGGATGGCCGGGCAGCACTACTGCCTGCGCTGGAACAACTACCAGTCGAATATGACGTCGGTGTTCCATCAACTCCTGCAGACGGAGGCCTTCGTCGACGTGACGCTGGCCTGCAACGAGGCATCCTTGAAGGCGCACAAGGTGGTGTTGTCGGCTTGCAGCTCCTACTTTCAGAAGCTGTTGCTATCGAACCCCTGCAAGCACCCGACCATCATCATGCCCCAGGATGTCTGCTTCAATGACCTCAAATTCATAATCGAGTTCGTCTACAGGGGTGAGATCGACGTCTCCCAGGCCGAGCTTCAGTCGCTGCTTAAGACGGCCGATCAGCTGAAGATTAAGGGCCTGTGCGAGGTGCCGGAGAGCAGGGAGGGCCCGTCCGTGAGCCTGAGCTCGCCGCCCCGCGACTCCAGCACGCCTCGGCTCAACTTCGCCAAGCTCAAGAGGCACCATCCACGTTACAAGAGGCCGAGAACCTCTTACGAGGGTTCGCTTCGCCCCGGTCACGGGCCCGGCCCAAACACGGAGCCGAGAcaacaccaccaccatcaccatcatcacCTCGCCGACCCAGCCAAGTACAAAGAGGAGGACTTTGTCGAGAGCTACGTGCGCGACTGCAACAAGGAGAATCGCCGAGACTGCTGGCCGGCTGAAGATGACGATTGCATGGAGACGACAGCGACGACCACAACAGTAGTCCTGGACTCGTGCCAACGCAGCAGCGGCAGCGTCGGCGGAGGCGGAGGCGGAGGCGGAGGCGGAGGCGGAGGTGGAGGCggaggcggaggaggaggagacaacaacaacagcggTGCCAACAACAACGCCGCCGGTGCAGTGACAAACAACAACGGTGACATGTTCTGTCACACAGGCCTCGGCCATTACGGCCACCATCCTGACCCGGGTGAGGTCGATCTGCCGCCAGAGACGCAGCCAACGCCGCCCAGCGCCACCCTCGTCGGCACCACAATCACCCACCTCCGGGACCCTGATCACCACACGGCAGCGCAAGAAAGTCCTACTCCTCGCTGTCTTCATTCGTCGTTCATAAACAGAGACAAGATGTTTACAGCagACATCCAGAGCTGCGACAGCGTGAAGATAAAGTTCGAGACTCTGCACACGATGGACTCGTCGGATACGATCGACATCGACAGCCACATGTCCGACCGGGCGAGCGTAAGCTCGAAAAACGCGGACGACAATATGATGATGATTACCCCGGAGCTTTTGGGACTGATGCCCTCCGGCAGCTCCGTGCACTCGGACTCGGGCGAGAATAATTCGCGCAGCCACTCCGGGCAGTCGGGTTCTCATCATCACGGCTCCAAGTCCTGGACGCAAGAGGACATGGACGCGGCACTAGAGGCCCTCAGGAATCACGACATGAGCCTCACGAAAGCCTCCGCGACGTTCGGCATACCGTCAACGACGCTATGGCAGCGGGCCCACCGCCTGGGCATCGACACGCCCAAGAAGGACGGGCCGACCAAGTCGTGGAGCGACGAGAGCCTCAATAACGCCCTGGACGCACTGCGCACGGGCACGATCTCGGCCAACAAGGCTTCCAAGGCCTTTGGCATACCCTCGAGCACGCTCTATAAAATCGCGAGGCGAGAGGGCATAAGGTTGGCGGCGCCCTTCAATGCGAGCCCGACTACCTGGTCACCGGCGGACCTCGACAGAGCGCTCGAGGCCATCAGGTCCGGCCAGACCTCCGTGCAGCGGGCCTCCACCGAGTTCGGCATACCCACTGGGACGCTGTACGGGCGCTGCAAGAGGGAGGGTATCGAGCTCAGCAGGAGCAACCCTACGCCCTGGAGCGAGGACGCCATGACAGAGGCCCTCGAGGCTGTCAGGTTGGGACACATGAGTATAAATCAGGCGGCGATCCATTACAATTTGCCGTACTCGTCGCTATATGGACGCTTCAAGCGCGGAAAATACGAGGAGCCGGTTGTCAATGAGATGTCACAGGACGGCTCGTCGCAGCATTTCCACCAGAGTCCGACTCAAAATCACTCATCCTCCCTTCCCGACCAAATGCCCTACCAGGGCAGCTGA
- Protein Sequence
- MPIGNSNGHRRATEERPRVCQPLFASLACEQKQGKRDSSRTTRLRRVARPRTPCGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPESREGPSVSLSSPPRDSSTPRLNFAKLKRHHPRYKRPRTSYEGSLRPGHGPGPNTEPRQHHHHHHHHLADPAKYKEEDFVESYVRDCNKENRRDCWPAEDDDCMETTATTTTVVLDSCQRSSGSVGGGGGGGGGGGGGGGGGGGGGDNNNSGANNNAAGAVTNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHTAAQESPTPRCLHSSFINRDKMFTADIQSCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNADDNMMMITPELLGLMPSGSSVHSDSGENNSRSHSGQSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVNEMSQDGSSQHFHQSPTQNHSSSLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141914;
- 90% Identity
- iTF_00463914;
- 80% Identity
- iTF_00305722;