Cfus018900.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ceratosolen fusciceps
Gene Symbol
-
Assembly
GCA_018883505.1
Location
RCIC01000004.1:12852977-12857979[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.04 4.1 8.2 0.5 1 22 585 606 585 607 0.79
2 16 0.75 76 4.2 0.8 2 19 614 631 613 634 0.90
3 16 0.44 45 4.9 1.1 1 23 639 661 639 661 0.94
4 16 0.00091 0.093 13.4 1.6 3 23 670 691 669 691 0.97
5 16 0.0041 0.42 11.3 2.8 1 23 698 721 698 721 0.96
6 16 0.00031 0.032 14.8 1.2 1 23 727 750 727 750 0.94
7 16 1.6e-07 1.6e-05 25.2 1.8 2 23 784 805 783 805 0.97
8 16 7.1e-06 0.00073 20.0 0.2 1 23 811 833 811 833 0.99
9 16 0.00077 0.079 13.6 2.8 2 23 845 867 844 867 0.95
10 16 0.018 1.9 9.3 2.3 1 23 873 896 873 896 0.95
11 16 0.013 1.3 9.7 2.5 2 23 918 940 917 940 0.93
12 16 0.00028 0.028 15.0 0.6 2 23 947 969 946 969 0.96
13 16 4.1e-05 0.0042 17.6 1.0 3 23 978 998 976 998 0.96
14 16 0.009 0.92 10.2 2.4 1 23 1004 1027 1004 1027 0.94
15 16 0.28 28 5.5 4.3 2 23 1034 1055 1033 1055 0.96
16 16 0.004 0.4 11.3 2.8 1 23 1061 1083 1061 1083 0.98

Sequence Information

Coding Sequence
ATGGCTTCGACCTCTAAGGAGTCCAATTTAATCGACACATCCCATTCTGCTGCTAAAATAACTGGCCAGCTGAACAAAAGTTCTGAATTAAGGACTATGAGGTCCATAGTTGAGGAATCTAACAGAGGACACAATGGACTAAAAGTTCCATTAGTCGATATATTTAGTGAAAAAGGTATTCAAATGAGATTGGGTCAGCAAATACAGCATTTAGAGGACATCGATGAGCAAGACAGCTTATCGACTCAAATGTGCATGGACTGCATTTGTGATTTGAAAATGAGTTATAAGTTCTTCATGCAAATTAAAAAGGCTGAAATGAAATTACAATCGATTTATCAGCAAATAGAGGACGAGCAAGTAGAGGACGAGCAAGTAGAGGACGAGCAAATAGAAGACGAGCAAGTAGAGGATGAGCAAGTAGAGGATGAGCAAATAGAAGACGAGCAAGTAGAAGACGAGCAAATAGAAGACGAGCAAATAGAAGACGAGCAAGTGGAGGATGAGCAGGTGGAAGACGAGCAGATGGAAGAAGAGCAAGTAGAAGAGGAGCAGGTAGAGGAAGAGCAGGCAGAAGATGAGCAATCTATCGAAGAGTTCGATCCGGACAATCCTTACGATTTAAACGAGAACGAAGGATTTAAAGGTATAGAGTCTGAAATCTGCCATGCCGATATCTTGGGGGACAAGACGACCGCTTACAGATACGACGAAGGGCTGAACGCATACGTTAAAATCGATGACATTGTAAAAGATCAAAGCGGCAATGAACAAAAGATAAAAGTCGAAAGTAATAGCATTAAGAAAGAGTCGTCGGGTCTGTCCGGGTCGTTGGGCCAACATTTGAAAATGCCGAATATATTAAAGAGAAAGCTATCGAGCGGGAATACGAGCGACGAGAGCATCGACTATAGTAAAATAAATTTTCAAAAATTTAACATCGGCCTGAAAGACTTGAAAATCCCAAGACTAAATCTTCAAGACACAATCAACATAAAGACAGAGGAGAATGGTATAATGTACGTGACCGCGAAGGGATCGAAGCCGAACGAGATGCTTTTAATAAAGGTTAAGAAAATGGGTAAATTGACGGAGAAGAAGACTGATAAGATGACGAACAGAAAGAGATCTGACTTTAATGCAATACACAAGATATTTCCGAAGTACGATAGCCATAGTGAAAAGGGCAGTTACATCGACGAGCAGATCGAGCAGTACAAAAAGAGAAGGGTCGAGGTACTGGGTCAAACGGCCAAGATATCGGATACGAGCATGGACGGGGTGGAGATCGACCCGGACATCAGATGCGGGAACGAGATGCCGACGGACGTGATGATCGTCGACCACGAGGAGCAGGAGCAGCTGGACCAGGAGCTCGACGAGATGAGGAAGGACGAGGGCGACATGTCGCAAGTCCTCGAAGACATGCCCTCGATAGCCCCGCAGTACGTGTCGCGGCTGGAAAAGCTGAAGCAACGCTGGAAGGACATTAAGAAGAGGCACGACGCGATAAACAAGGACTTGGCCGAGGACTGCACCGACAGATTGAGGACAATTTTACGGCAGAAGGACGAGTATTTATTGGACTTTGTTAATTATTTAAAGCAGCGTAAGATCGTTGCCTCGCGTTTAAAGGACGAGGACATTATTTCGCTGTACGAGGTGAAGAACAATGTTATATTGGAACGACTGCCGATGCTGAGCGCCATCGAGCTCGAGGAGAACGTCGACCCCTTCGAGTACCGTGAGAGCTATCAGTGTGACTTTTGCGACCAATCCTTCCCCAACAGGGAAATGGAATACGAGCACGCAAAGATCCACGACTTCAAGCTCATGCTCTACTGCGAGGACTGTAAAAATGAATTCTCGACGCACAAGGCCAAGCGCGCGCATAGCATTAAGTGTGTACAAAAGTTTTTATGCAACTATTGCGATATGATTTTAGAGTCTAAGGGTAAGAAGCGCCAGCACGAGCAGAAGCACTGCGACGAGATGGACGGGCAGCTCTGCGACCTCTGCGGCGAGAAGTTCAAGCACCAAGGTACCCTCGACCAGCACGTCAAGTCCCGGCACATGCAGCTCGAGAAGATCTACAAGTGCCCCCAGTGCACCAAGAGATTCGCCTTCCGCACTAAGCTCACCTTCCACCTGAAGTCCGTGCACACGACCTGCCGGGCCTTCCTCTGCGAGGACTGCGGCTCGGACTTCAAGAACCCGGCGAGCCTGCGCCATCACAGGATCCGCAAGCACCAGTCGGTCAACAATAAGAAGGAGTGCCACATCTGCCACAAGCTCGTGCCCGTCTACAGCATGTCCAAGCACATGCACACGCACAAGGCCTACACGATCGAGTGCCCCCACTGCGACAAGATGTTCAAGAACACCTCGACCCTGAAGCAGCACATAAGGATCCACGAGGACCAGCGGCAGTACAAGTGCGACATGTGCGGGGTCGGCTTCAACAGGCGGGACGGCCTCAGGCTACACCTGAAGGTCCACGAGAAGACGGACAGCAGGGGCTTGAAGGAGTGCTCCTGCCAGGTCTGCGGTGAGAAGTTCCCGAACCACTCGATGCTCGTCATACACAGGAACCGCACCCACAAGGACGGGAGGAACTACACGTGCCACATATGCAACCGGTCAATGATATCGACGCGCTCGCTCGAGTGGCACCTGTCGCACATACACAACGAGCGGATGCCGGGCATCGTCAAGGACGACTCGAGCGTCGACGCCGAGACGAAGAGGGTCTCGTGCTACCACTGCGACAAGACCTTCAAGACCGAAATGATACTGCGCACCCACGTGAAGAATACCCACGTGCAGAAGGAGCCGGTCAAGTGCCTCGACTGCGATCTCATGTTCACGTCGGAGGTGCGGCTCAAGCACCACATGATGATAATCCACAATCGGCTGGAGGGCACCCTCGCCTGTCCCCACTGCCCTAAGCGCTTCGTCAACCAGCTCAGACTGAAGACGCACATGATATCCCACTCGGACGACAGGCCGCACAGCTGCGACCTCTGCGGCTTCATGCTCAAGACGAAGATACAGCTGATCAAGCACAAGCAGAACAGGCACAGCAACGAGCGGCCCCTCCAGTGCAAGTACTGCTCCTGGAGGTGCAAGCAGGTCAGCGCCCTCGTATGCCACGAGAGAACGCACACGAACGAGAGGCCCTACAGCTGCAGCGTCTGCAAACAGAAGTTCAAGTACCTGGGGGACAAGAATAAGCACGAGAGACGGCACGAGAGCCTCGGGGGCTCCGGATTCAAGAGGATCGTAACCGGCAGGAACACCAACAAGCTCCACCGTAAGAAGGACGACGACTCGTTCGAACAGGACTCGGACCAGGACCAGGAGGACTACGACATGGATCAGGACGGCGAGGAGGAGGATTACGAGGACACGGAGGAGAGCATCAAGTTGAACAGAGACCAGTACGACGAATCCGAAATTGTTAAATTCGAGGCCGGGGACATGATGCCCGAGGAGTCACAGATGTACGTGGAGGACACGTCCCAGGATACGAACGATGCGAACGGCGTCGTGATGGGGATCGAGGATACGACCGTGTACACGGAGGAGGTGACGGCCGATCACATTGAGCCGGAAATCATTACCAGCGACATTATAGACGAGTCGATGCTGCAGCCGGGGACTGTCGTGCATCTTCAGCAGGAGGACGAGACTGGAAAAATTCAGGTCATACCGGTTATGCTGTCACTGCCCGACTTGAGCGACGCCACATCCGAAGTCAACCTTGCCACCGCATCTATAATGTACAATAACTGA
Protein Sequence
MASTSKESNLIDTSHSAAKITGQLNKSSELRTMRSIVEESNRGHNGLKVPLVDIFSEKGIQMRLGQQIQHLEDIDEQDSLSTQMCMDCICDLKMSYKFFMQIKKAEMKLQSIYQQIEDEQVEDEQVEDEQIEDEQVEDEQVEDEQIEDEQVEDEQIEDEQIEDEQVEDEQVEDEQMEEEQVEEEQVEEEQAEDEQSIEEFDPDNPYDLNENEGFKGIESEICHADILGDKTTAYRYDEGLNAYVKIDDIVKDQSGNEQKIKVESNSIKKESSGLSGSLGQHLKMPNILKRKLSSGNTSDESIDYSKINFQKFNIGLKDLKIPRLNLQDTINIKTEENGIMYVTAKGSKPNEMLLIKVKKMGKLTEKKTDKMTNRKRSDFNAIHKIFPKYDSHSEKGSYIDEQIEQYKKRRVEVLGQTAKISDTSMDGVEIDPDIRCGNEMPTDVMIVDHEEQEQLDQELDEMRKDEGDMSQVLEDMPSIAPQYVSRLEKLKQRWKDIKKRHDAINKDLAEDCTDRLRTILRQKDEYLLDFVNYLKQRKIVASRLKDEDIISLYEVKNNVILERLPMLSAIELEENVDPFEYRESYQCDFCDQSFPNREMEYEHAKIHDFKLMLYCEDCKNEFSTHKAKRAHSIKCVQKFLCNYCDMILESKGKKRQHEQKHCDEMDGQLCDLCGEKFKHQGTLDQHVKSRHMQLEKIYKCPQCTKRFAFRTKLTFHLKSVHTTCRAFLCEDCGSDFKNPASLRHHRIRKHQSVNNKKECHICHKLVPVYSMSKHMHTHKAYTIECPHCDKMFKNTSTLKQHIRIHEDQRQYKCDMCGVGFNRRDGLRLHLKVHEKTDSRGLKECSCQVCGEKFPNHSMLVIHRNRTHKDGRNYTCHICNRSMISTRSLEWHLSHIHNERMPGIVKDDSSVDAETKRVSCYHCDKTFKTEMILRTHVKNTHVQKEPVKCLDCDLMFTSEVRLKHHMMIIHNRLEGTLACPHCPKRFVNQLRLKTHMISHSDDRPHSCDLCGFMLKTKIQLIKHKQNRHSNERPLQCKYCSWRCKQVSALVCHERTHTNERPYSCSVCKQKFKYLGDKNKHERRHESLGGSGFKRIVTGRNTNKLHRKKDDDSFEQDSDQDQEDYDMDQDGEEEDYEDTEESIKLNRDQYDESEIVKFEAGDMMPEESQMYVEDTSQDTNDANGVVMGIEDTTVYTEEVTADHIEPEIITSDIIDESMLQPGTVVHLQQEDETGKIQVIPVMLSLPDLSDATSEVNLATASIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01216982;
90% Identity
-
80% Identity
-