Ccap002592.1
Basic Information
- Insect
- Ceratitis capitata
- Gene Symbol
- nfxl1
- Assembly
- GCA_000347755.4
- Location
- NW:3728787-3732531[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1.5 9.5e+03 -3.8 2.1 15 19 174 178 173 178 0.82 2 18 0.13 8.1e+02 -0.4 0.4 4 10 209 215 208 215 0.95 3 18 5.5e-09 3.4e-05 23.2 15.1 1 19 223 240 223 240 0.98 4 18 1.5 9.4e+03 -3.7 1.1 5 10 265 270 265 270 0.91 5 18 1.6e-05 0.1 12.1 15.6 1 19 276 295 276 295 0.96 6 18 0.71 4.3e+03 -2.7 1.1 5 10 319 324 319 324 0.90 7 18 2.1e-08 0.00013 21.4 14.3 1 19 330 348 330 348 0.98 8 18 1.3 8e+03 -3.5 0.4 1 8 373 379 373 380 0.59 9 18 6.6e-06 0.04 13.4 9.1 1 18 383 400 383 401 0.95 10 18 0.22 1.3e+03 -1.0 0.5 1 5 410 414 410 419 0.75 11 18 1.6e-05 0.098 12.2 14.7 1 18 435 453 435 454 0.95 12 18 3.9e-08 0.00024 20.5 15.5 1 18 463 480 457 481 0.86 13 18 0.0066 40 3.8 6.4 9 18 526 535 524 536 0.89 14 18 0.025 1.5e+02 2.0 5.5 3 11 549 557 539 558 0.83 15 18 0.89 5.5e+03 -3.0 1.4 6 10 618 622 617 622 0.88 16 18 2e-05 0.12 11.8 5.3 1 12 628 639 628 639 0.97 17 18 0.0028 17 5.0 16.2 3 18 668 683 667 684 0.93 18 18 7.4e-05 0.45 10.0 15.6 1 16 735 749 735 755 0.90
Sequence Information
- Coding Sequence
- atgtctaTTTCTCctgcaaaaaacgaaaaaatgaagTCGAACTCCAaaccaaataaaccaaaactaaaCGGAGTAAATCGCTTTGAAGAAATACATGCCAAGAATATAGCAGCGGCTAAGAAATTAGTGGAAAAATATTCCTCCAGCTCTGATGAAGATGATGAGGagattaatgaaaacaaaattcttgATACTCTATATAAGCATTACAAACTTGGCACTGGATCAACAGATATCACAACagcattacaacaaaaaactgcAACCTTCCTTGAAAACGCGTTGCACTCGGGATCTGCAACTTGTGTAATTTGCATTGGGAGCGTGCGTCGTTCTGATTCAATATGGACCTGcaaacattgtttttgtttctttcatttGAACTGTATACGCCGATGGGCCAATGACAGTATTGCGCAAATGAAAGCTAAATGTGAGCAGACGTCTATTGACCAGGGTTACTATAATCATCTTGGCCAGTTTGTACCACCGAAGCGTAAACGACCATTGCATTGGAGTTGTCCACAATGTCGTAAAGATTACACAATTGAAGAGAGGCCCACCACATATGAATGTTTTTGTGGAAAGGAGGCAAACCCACGACCAGCACCTTTTTTGTTACCACATTCATGTGGAGAAATATGCGGAAAAAGCTTAAAACCAGCATGTGGCCATACTTGTATGTTGCTCTGCCATCCAGGCCCTTGCCCGCCTTGTTCTCAATATGCAAATACTAGCTGTCTATGTGGTCAATCCGAGAAAAGATCTATACGCTGTATAGATAAGGAATGGAAATGTGATAGAAAGTGTAACCAATTGCTAACATGCGGACAGCACAAATGTAAAGCATCATGTCATAAACCTAATCAGTGCCCTCCTTGCACGAATACTAGTTTGCAGCCATGTGAATGTGGAAATGAAACCATTAAACGAAATTGTTCTGAGCTCAGATGGAATTGTAAAAAGGTTTGcggcttaaaattttcatgtaGCACTCATACTTGCAAACGTGTTTGCCATTCAGGCCCTTGTGGCGATTGTCCTTTAAGTTTGCCGCGCTCATGCCCATGTGGTAAAACTCAAAAAGTTGTACCATGCACTGAAGTCATTGATCCTTGCGGTGatacttgtcaaaagcttttatcCTGTGGGGTGCATACTTGTTCACAACGTTGTCATCGGGACGAATGTAATTTGTGCTTGATTATAACAAAGAAGAAATGCCGTTGTGGCATACATGAAAAAGAATTGCCTTGTTGGAAGAGCTTTATATGTGAAACTAAATGCAAACGAATGCGAGATTGTGGAAAACACACCTGCAACAAAAAGTGTTGTGATGGCCGAATGTGTCAGCCTTGTGATAAAGTTTGTGGTAAACCACTTACTTGCCAGAAACACAAATGCCAGTCGGTTTGCCACGAAGGTCCCTGTTATCCTTGTAACCAGCAATCGCAAGTGAATTGTCGTTGTGGTAAGACGTCCAAGCGAGTACCTTGCGGCCGTGAACGCACTGCACGTGTAATGTGCATGGAATTATGCCGCATTCCTTCGAAGTGTCACCATCCAATAAAACATCGCTGCCATAAAAGTGAATGTCCACCGTGTAATCAGAAATGTGGCCTACCAAATAATACGACCGGATGTCAGCATATTTGTGAAGCTAAATGCCATGTAGCGGttaaatttaatgaacaaaCTAAAACGAACGGAAGTGCAAGTGTTTGGGgtcaaaataaaaagTTTGAATTCAAAACTCTGCCACATCCAGCGTGTGAACAACCGGTGACAGTTACTTGCATAGGTGGCCATGAAATAGCTGAATGGCCTTGTTGGAATTCAAAGCCTACATCCTGTCAACGTAAATGCAATCGCTCTTTACGTTGTGGCAACCACAAATGTGTGCTCGTATGTCACTCTGTGCCGGACTTAAAAGATATGAagGAACAAATCGGTTGCGCTAGTTGCCAAGAAGGTTGTATTATTCAGCGTCCACCAGGTTGCGAACACGCTTGTTCACGACCCTGTCATCCACCGCCATGTAATCCGTGtgacaaaatgataaaaacgaAATGTTATTGTGGCTTAACGCAACTAATATACAAATGTTCAGAATACTATAAAGTGGAAGGCACCGAAGAAGAAATAGCCATGACACAGGCACGATTGAAGAGCTGTGGAAACCGCTGCCTCAAGACCTTTCCGTGCGGTCATCGCTGCCATACGACTTGTCATCCAGGCAAGTGTCCAAATCCTGAAATGTGTCGGAAGAAAGTGCGCATATTTTGCGAATGCAAACGTATTAAAGTTGAAGTATCCTGTGATAAACATCGCGCCGGTCAAACAACCATACCATGCGACGTCTTCTGTATTGAAACCCAGAAAAAACTGGCAGAACAATTGAGGCGCGAACAGGAGAAACTGCGACAGCAAGAGGAAGCTAAAAATCGCGCAGAAGTTGaacaatttgaaaagaaattcaacAAGCGTAAATATAAAGAACGTAAGGTGCTGAATGAGAAAGCGAGCAGGCAgataaattggaaattatttggTATTTACGGTGGCATAATACTAGCAATCGTTATAGCCATTGCTGTAGCATTTTATGCAGATAgttaa
- Protein Sequence
- MSISPAKNEKMKSNSKPNKPKLNGVNRFEEIHAKNIAAAKKLVEKYSSSSDEDDEEINENKILDTLYKHYKLGTGSTDITTALQQKTATFLENALHSGSATCVICIGSVRRSDSIWTCKHCFCFFHLNCIRRWANDSIAQMKAKCEQTSIDQGYYNHLGQFVPPKRKRPLHWSCPQCRKDYTIEERPTTYECFCGKEANPRPAPFLLPHSCGEICGKSLKPACGHTCMLLCHPGPCPPCSQYANTSCLCGQSEKRSIRCIDKEWKCDRKCNQLLTCGQHKCKASCHKPNQCPPCTNTSLQPCECGNETIKRNCSELRWNCKKVCGLKFSCSTHTCKRVCHSGPCGDCPLSLPRSCPCGKTQKVVPCTEVIDPCGDTCQKLLSCGVHTCSQRCHRDECNLCLIITKKKCRCGIHEKELPCWKSFICETKCKRMRDCGKHTCNKKCCDGRMCQPCDKVCGKPLTCQKHKCQSVCHEGPCYPCNQQSQVNCRCGKTSKRVPCGRERTARVMCMELCRIPSKCHHPIKHRCHKSECPPCNQKCGLPNNTTGCQHICEAKCHVAVKFNEQTKTNGSASVWGQNKKFEFKTLPHPACEQPVTVTCIGGHEIAEWPCWNSKPTSCQRKCNRSLRCGNHKCVLVCHSVPDLKDMKEQIGCASCQEGCIIQRPPGCEHACSRPCHPPPCNPCDKMIKTKCYCGLTQLIYKCSEYYKVEGTEEEIAMTQARLKSCGNRCLKTFPCGHRCHTTCHPGKCPNPEMCRKKVRIFCECKRIKVEVSCDKHRAGQTTIPCDVFCIETQKKLAEQLRREQEKLRQQEEAKNRAEVEQFEKKFNKRKYKERKVLNEKASRQINWKLFGIYGGIILAIVIAIAVAFYADS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00191050;
- 90% Identity
- -
- 80% Identity
- -