Ccap008100.1
Basic Information
- Insect
- Ceratitis capitata
- Gene Symbol
- ftz-f1
- Assembly
- GCA_000347755.4
- Location
- NW:1684826-1789356[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.074 9e+02 -1.6 2.7 59 159 17 119 4 145 0.65 2 5 1 1.2e+04 -8.2 17.0 68 183 376 490 319 513 0.44 3 5 1 1.2e+04 -5.8 10.8 30 69 574 613 514 654 0.54 4 5 1.7e-19 2.1e-15 56.5 0.3 1 76 800 876 800 913 0.69 5 5 2.3e-57 2.8e-53 181.3 0.4 156 408 985 1231 935 1233 0.89
Sequence Information
- Coding Sequence
- ATGGACGACTACAGCAGTGTTCCAATGCTCTCCAATAGTGGCTATACTAAtagtgccaacaacaacatcaacaacaacatcaacaacaacaacaataccaccGTACAAACACAACTACAAACACATCATCACAAAGATCAAATGCTAAGTGCTGGCAATGTGCCAGCTACGCCCTTCATCTATGAACTGCCTGTTAGTCACAAAACCAatagcggcaacaacaacaacaacagccatttGGTTAAAAACTCCACCAGTGATTACACCGTCTTCACCAATTGCATACAACAATCCACATTGCTCGATCAACGTACCGTGGATGTGAGCAATATCGATGGCGTCTCACTGAGCAGCCTCTGTGACCTGAAATTTCCCAATTCCCCAATGGCGGATagtaattttaagaatatttcacTCATTAATATCGAGGCTAATAATGTTTTGGTGCCTGCTAAAACCATAACAACCAATGAATTAATTACCGATGGCAATGATGGTGTCGTCGAGTCAACCTTTGCGAATATTTTATATGTCAAGGACGATATCGTTATAGAGGCGAAGGATAAGCAAAGTTGTGGCGTCGGCAGTGGCCGTGGTGGCGGCGGCAGCGATACAGCGCAGGTAACACATGTGACGCACTATTTGCCCCTGAAAGTGAACAATCCGCCAGCTGTTGGAGAAGCAAAGTTTTCAAAGGCCACAGTCACGGTCACGGCTGTGCCTGCTAATGCTGCTGTTGCCGCAACAAGCGCGGTGAGTGCGCTGCCGAATAACAGTATGATGACTGGCATGTCGTACAACACAGTCGAAACGGTCGGGAGTTTAACGAATGCTCCCGCTacggcggctgctgctgctgcaggtGGTAGTCGTATTGGCCGAGGCGGTGGCAGAGGTAGTAAAAGCAATAGAGGCAGTCGGGTGGCGAGAGGACATGGAAATGGCAGAGGTGGTCGTGCAGCAGCAAATcgtcagcagcaacagcaggtAAAGCAAACAGAAGCTCTTGGCTCGCCCATACTGGCGTCAGCAGGCGGTAACggtgaattttttaaatgtgtgaGTCCaggtaataatttcaatgctgtAATTTTGGCGAATAATGAGCATCACAATAACGGTAGTAGCagcaggaacaacaacaataccaccAATAACACCGTCAACAATTCAGCTGAtaatcaaataacaacaacaacaattttaacaacaacaacgtcccCAACAGTAATGACAGACACTGCCAGCAGCAAAATCATCACACATCCTATCAGTAATTTCATTAGCAGCAGcaatactaacaacaacaacagcataagCAGCAATCACAGCCAGAATAGCAGCGCCAGTAGCGTTAGGAGTAGTTgtagtaataatattaacattattagtaataataatagccaaatcaacaacaacaacagcagcagcaacatgcCAACAATCAATgcaatttgcaacaacaacaacaaccacaatgtACAAAATACAAACAGTATTGCAACAATGAGCCAAACCCGGCCAACCGTTTTGCAGTGCGTTGATGAGGCGGCTGCGGCAGCGGCAGTGGCAGCGGCTGCGACTGCTCTTTCGCCTACTCAGTGCCCTGCCGGCGCTGTTATAATGTCCAATTGTGTTCCTGAAGCCAACTGCAAtagcagtagtagtagcaacaacaacaacaacaataataataatacatcaACGTTATCACCCAGTTCCATGGAGGCTCTAATAGAGTCAGACAATCAACAAATAtcacaacatcaacaacaacaacaaccacaacaacaacaaccacaacagctACAttcacaacaacatcaacaactaTTGAACTCATCTGTTAGCATTGACGATGATTCGCTATCGTCTATGGACGATCTGCTGGACGATCAGGAGATAAGCGAAGCCAGTTTCGGTTATCAGGACAATACGTCATCACATTCACAACAAAGCGTCGGCGGTGGCGCtagtggtggcggcggtggtggtagTAGTACCAGTAGTAATGCCACCAATGTTGTTCTACTCAATGGTGGTAATCCAAATGCCAGCGGCGGTTATATGACACTCCTGCCACCAGCCACATCGAGTGGCGGTCACATGGGCATATCGTCCGGTGGCGCTGGACCCAGTCAGGGTGGCTCCGGTGAGGGTATtgatttcaaacatttatttgaagaatTATGCCCGGTGTGTGGTGATAAGGTGAGCGGCTATCATTACGGTCTGCTGACGTGTGAATCGTGCAAAGGTTTCTTCAAACGCACCGTACAGAATAAGAAGGTGTACACGTGTGTTGCTGAGCGTTCGTGTCACATTGATAAGACGCAACGTAAACGTTGTCCATACTGCAGATTCCAGAAATGCTTGGAGGTGGGCATGAAACTTGAAGCTGTTCGAGCGGATCGAATGCGTGGTGGACGTAATAAATTTGGGCCTATGTACAAACGTGATCGGGCGCGAAAATTACAAGTGATGCGACAACGCCAACTCGCTTTGCAAGCGCTACGCACATCAATTGGTTCGGTTGAGATGAAAAACTCACCACTCTCACCAGGATACCAACAAGCATATCCGAATATGAATATAAAGCAAGAAATACAAATACCTcagGTGTCCTCACTCACACAATCACCAGATTCATCACCCAGCCCCATAGCCATTGCGCTCGGACAGGTCAATACGAGTGGTGGTGTGATAACGACGCCAATGAATGGTGGCAATGGtagtggtggcggcggcggcagcggcggTGGAGGCacaggtggtggtggtggtggtggcggcagtGGCAATGGTGTCAATGCCGgtgccaataataataataatagcaacaacaccaGCGATGGACTCAACCGCAGTAGCAGTGGCAATTGTCATGACACTGGAACTGGATCTCTGCAGAATGCGTCCGAATCGAAATTGTGcTTCGACTCTGGTACACATCCTTCAAGCACAGCTGACTCCATCATAGAGCCACTGAGAGTGTCACCAATGATACGTGATTTTGTGCAATCGATAGACGATCGAGAATGGCAGACGCAACTCTTTGCATTGCTACAAAAACAATCCTATAATCAAGTGGAAGTTGATCTCTTCGAGCTAATGTGCAAAGTGTTGGATCAGAATTTGTTCTCACAAGTGGATTGGGCAAGAAACACCGTCTTCTTCAAAGATCTTAAGGTGagtTTtgcattgaaaattgaaaaaaggcaacatttgaaaactattttgtgCANCGATCATCTACATCAGCGAATACACAACGGACTACCCGATGAGACGCATTTGAATAACGGACAAGTATTCAATCTGCTCTGGCTGGGTCTTTTGGGTGTACCACAATTGTCTGATTACTTCAATGAGTTGCAAAATCGCTTACAGGATCTAAAATTCGATATGGGCgattatgtgtgtatgaaattCCTAATTCTACTCAATCCagAAGTACGTGGCATTGTTAACAAGAAGACGGTCTTAGAGGGACAAGAGAATGTACAAGCAGCGCTGCTGGACTATACGCTAACCTGCTATCCATCAGTGACGgaTAAATTTCGGCGACTGCTTAGCATACTGCCCGATATACATGCAATGGCTTCGCGGGGCGAAGATCATCTCTATTCAAAACACTGCGCCGGTAGTGCGCCCACCCAGACGCTACTCATGGAAATGTTACATGCAAAACGAAAAGTATAA
- Protein Sequence
- MDDYSSVPMLSNSGYTNSANNNINNNINNNNNTTVQTQLQTHHHKDQMLSAGNVPATPFIYELPVSHKTNSGNNNNNSHLVKNSTSDYTVFTNCIQQSTLLDQRTVDVSNIDGVSLSSLCDLKFPNSPMADSNFKNISLINIEANNVLVPAKTITTNELITDGNDGVVESTFANILYVKDDIVIEAKDKQSCGVGSGRGGGGSDTAQVTHVTHYLPLKVNNPPAVGEAKFSKATVTVTAVPANAAVAATSAVSALPNNSMMTGMSYNTVETVGSLTNAPATAAAAAAGGSRIGRGGGRGSKSNRGSRVARGHGNGRGGRAAANRQQQQQVKQTEALGSPILASAGGNGEFFKCVSPGNNFNAVILANNEHHNNGSSSRNNNNTTNNTVNNSADNQITTTTILTTTTSPTVMTDTASSKIITHPISNFISSSNTNNNNSISSNHSQNSSASSVRSSCSNNINIISNNNSQINNNNSSSNMPTINAICNNNNNHNVQNTNSIATMSQTRPTVLQCVDEAAAAAAVAAAATALSPTQCPAGAVIMSNCVPEANCNSSSSSNNNNNNNNNTSTLSPSSMEALIESDNQQISQHQQQQQPQQQQPQQLHSQQHQQLLNSSVSIDDDSLSSMDDLLDDQEISEASFGYQDNTSSHSQQSVGGGASGGGGGGSSTSSNATNVVLLNGGNPNASGGYMTLLPPATSSGGHMGISSGGAGPSQGGSGEGIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQRQLALQALRTSIGSVEMKNSPLSPGYQQAYPNMNIKQEIQIPQVSSLTQSPDSSPSPIAIALGQVNTSGGVITTPMNGGNGSGGGGGSGGGGTGGGGGGGGSGNGVNAGANNNNNSNNTSDGLNRSSSGNCHDTGTGSLQNASESKLCFDSGTHPSSTADSIIEPLRVSPMIRDFVQSIDDREWQTQLFALLQKQSYNQVEVDLFELMCKVLDQNLFSQVDWARNTVFFKDLKVSFALKIEKRQHLKTILCXDHLHQRIHNGLPDETHLNNGQVFNLLWLGLLGVPQLSDYFNELQNRLQDLKFDMGDYVCMKFLILLNPEVRGIVNKKTVLEGQENVQAALLDYTLTCYPSVTDKFRRLLSILPDIHAMASRGEDHLYSKHCAGSAPTQTLLMEMLHAKRKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -