Basic Information

Insect: Ceratitis capitata
Gene Symbol: -
Assembly: GCA_000347755.4
Location: NW:407243-411991[+]

Transcription Factor Domain

TF Family: MBD
Domain: MBD domain
PFAM: PF01429
TF Group: Unclassified Structure
Description: The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.9e-11 1.2e-07 30.7 0.0 9 71 265 323 260 326 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.9e-11	1.2e-07	30.7	0.0	9	71	265	323	260	326	0.85

Sequence Information

Coding Sequence: ATGGAAGTGGACGATGCTTCTGGAGTGATGAGAGATTCGCCAATTCATCGAACGGAATCTCCACGATGGAAGGAAGAGAATAGCGGCGCCTCAGCAATCAGCCACATTAGTCAAGGTGACGATGCAAAGCCTGCCGAAATAAGCGAACATGAGGATGATCCTCCTGAAGAGGATAAAGTTGATATACATTCCgatgataaaaatgaaaatgattcacTTCATTCCGAAGCGGCATTAAAATTGGAAGTATCAGGCACTGATGAAGACGATAGTCACGATGGTGTCGCATTTGATTACCACTTATTAAGTGTGGATATGAGAAATACTGAAATGCTTAAACAAAATGCTATAAATGTAGCACTTAAACGTAAAAGATATGAATATCGGCGTTCTGGATCGACAGAATGCTTATTAGGATTTGACGAGCGAAGTGGGGAAGCTGTTGTTATAAATGCGGACTTGACAATATTTACGCAAGGAAAAGTTATTGAACGTAAAGAAAAAGGAGGCACTGCTACTTCCCCTCGTCcgagtaaaaaattgaaatcaAGCTCTACGGCTTCACCATCACGAACATCGCCAGTCGTGCAGGCAGTTTCAAATACATCTTCTAAAGAAATGGAGGAGGAGAAAACGCGAAAAAAAGAGCAAACTGATCATGTAGTAGGTGATAATGATATACCTACTAACACAATgtcgaaaaattcaacaaatgcTATAGCAAGTTCTGCACCGCCGACCAGCgcaaatatcagcaaaaaagcATTGTCGGCACAAGATGACTTTTACAAAAAACCATTCGAATTTGGTTGGAAACGTGAATTAGTATGGCGTGCAAACATAGAATCAAGTAAAGACAAAGCGGACGTTTACTTTATTACACCTGGTGGTAAAAAATTACGGACACGCAGCGACATATTGCCCTTACTTGAAGGCGATCTAACCATTGATCACTTTAGCTTTGCTCGAGAGCCACTCGGTATGGGTCCCGAATTCGAGACCGTGCGTAGTGCAAAACCATCTAGCCGAGTTTCATCGGCCGCTGCCACAATAGCTGCAGCACCCGCGCCTAATATCGGTAAACGTATTTCTAAGCCCAAAGGGCCGAAAGGAGCCAGTCCACCACCCCAAGGCTGGACACCGACGCGAGCGCTTAAAGTGAATAACGCTATGCTTAGCAGCTCCACCTCAAGTAGATTCTCAACAAATTCCACATCCAGCACGCCACCAAGTAGTCGACAAGCCGGTTCTAGCAGTGGTACAAGtcataaaagtaataaagtaaagaaGACATCTGTCACCACAAATGTAACTGCTACAACAACGCCAACGGTCAACAGTGCGAACAACAGCCGTTCAATACATGAACCTTGCACAGCCAAATGCACACGAGCAACAGGTCAAGTTCCTCAACTGAAATGTGTGAAATGTCTTTGTCTTTTCCATCACGAGTGTGTTGGCTTAAATCGCttgaatagcgaatatcgtatTGCTGCAGAAGGTAGTTCTCAAACAAAGGGTCGTGAATATGTCTGTGAGaCTTGTTTACCCGCAAAAGAGGTGACCTCTGCAACAAAAGCGGCCACAACACGTAAGCCATCCACTGTACGGCCGATACGACTCGAAAACAAGTACCCACAAACAATTGCGGTAGTAAAGGGAAAAAAGTATGTGATGGTTGCCAAACCAATTGCACCCCCAACTGAacaCGTCAATGATATTGAAAATGatctaaaacaaattaatgacaGCATACGTAACAATCGCAAGACATCTGCAGTTTCATTGGATTCAACTGCGCAAACCCCCGGTACGCCAAACGTACAAAATGCTGCCGATCAATCGAATAAAGTTTTCGCTACGAACTTTTTTGCGAATGTCTCATTTGCGTATGACGCTTTGCTTTGCATTCTTAAATACTTGAAAATCCATGAACGCCCACGTGCAGCGTCGGTGTGTAAGCTCTGGAATCTCGCTGCCAAGGATACATCGTTATGGCAAACTGTTCGTATGAAAAATTCTCGTGTTAGCAGTTGGGCAGGCTTCTCTGCTGCCTTGCGTCGTGGCGAAACAAGGCATTTGGATTTGCGGAAAATGTTAGTATCCAGCACGCGCGGTGAGGAAATGTGGCAAAGTTTTTCTGAACATATCGGTACGGTGTTTTCGTTGGAAATTATTGATTTGTGTCGTTGTTCGGCGCGAGTTGTTGAAAGTTTAtttcaaagcaacaaaaatttacgCATATTGAACGCTATTGCAATTAATGATGATGCCATAAATCTTGAGCATATCGGTGTGTTAACAAGGCTTGAAGAATTACGTCTACGCACATGTGAGCCTGCAGTTATTACGGGTAATTTAGAATCGCTACAAGCACTCAAAAATCTCACTCAGCTCTCTATAACGGCTGTACGAGAGTTGGGTACTAAAGGTGTCGAGGTATTTGGTGAACTTGGGAATTTATGTTCGCTGGAATTAGGTGAATGTGGTGATTTTGATTCGACTTTTGCAACAGTTGTGCTACCAAAACTGAAAAAACTGCGTCGCTTGCGACTCGAAAACGGGCAAGAAACCAGCTGTTGTACGTTGGGCATACTGGAGGCGGTTGCACAACTTGAGGAATTGTCACAATTGGAATTGGTCAACTTTGATATTAAATCAGgatttgatgaaaaattacaattatgcACTAATATACGGAAATTACTCATCATTCCTACGTATATTTCAcagtcagcaacaacaaatcacatAGTTTTGAATGCAGTACAACAGGTAGCATATACATTAAAAGTGTTCACTTGGGGCGTGACAGTTGAGTTGCTGCGCGTGACCGCCTTATACGTAGATCAGTGCGAGGAATCAACTAAGAAGGAAAAACATCACTTTGATGAATGTATACCGGTCTTGAAGCCTGTGCCTGGTGCGCCTACTAACGAGGATGGtgatgaagatgatgaagaGAGCGCAAACTCTAAGGAAGAACAAGTGCCAAGTGATGTAccgcaaattgaaatattaccaTTAGACAAAGTGGAAACCATACTGGCAGATAATTTACCGAAAACTAAATTTACAATTGTCAAAGTGCCGTATCATGCAACTTGTAAACAACAACTTGTAGAGTGA
Protein Sequence: MEVDDASGVMRDSPIHRTESPRWKEENSGASAISHISQGDDAKPAEISEHEDDPPEEDKVDIHSDDKNENDSLHSEAALKLEVSGTDEDDSHDGVAFDYHLLSVDMRNTEMLKQNAINVALKRKRYEYRRSGSTECLLGFDERSGEAVVINADLTIFTQGKVIERKEKGGTATSPRPSKKLKSSSTASPSRTSPVVQAVSNTSSKEMEEEKTRKKEQTDHVVGDNDIPTNTMSKNSTNAIASSAPPTSANISKKALSAQDDFYKKPFEFGWKRELVWRANIESSKDKADVYFITPGGKKLRTRSDILPLLEGDLTIDHFSFAREPLGMGPEFETVRSAKPSSRVSSAAATIAAAPAPNIGKRISKPKGPKGASPPPQGWTPTRALKVNNAMLSSSTSSRFSTNSTSSTPPSSRQAGSSSGTSHKSNKVKKTSVTTNVTATTTPTVNSANNSRSIHEPCTAKCTRATGQVPQLKCVKCLCLFHHECVGLNRLNSEYRIAAEGSSQTKGREYVCETCLPAKEVTSATKAATTRKPSTVRPIRLENKYPQTIAVVKGKKYVMVAKPIAPPTEHVNDIENDLKQINDSIRNNRKTSAVSLDSTAQTPGTPNVQNAADQSNKVFATNFFANVSFAYDALLCILKYLKIHERPRAASVCKLWNLAAKDTSLWQTVRMKNSRVSSWAGFSAALRRGETRHLDLRKMLVSSTRGEEMWQSFSEHIGTVFSLEIIDLCRCSARVVESLFQSNKNLRILNAIAINDDAINLEHIGVLTRLEELRLRTCEPAVITGNLESLQALKNLTQLSITAVRELGTKGVEVFGELGNLCSLELGECGDFDSTFATVVLPKLKKLRRLRLENGQETSCCTLGILEAVAQLEELSQLELVNFDIKSGFDEKLQLCTNIRKLLIIPTYISQSATTNHIVLNAVQQVAYTLKVFTWGVTVELLRVTALYVDQCEESTKKEKHHFDECIPVLKPVPGAPTNEDGDEDDEESANSKEEQVPSDVPQIEILPLDKVETILADNLPKTKFTIVKVPYHATCKQQLVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01045468;
90% Identity: -
80% Identity: -