Ccap008458.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ceratitis capitata
Gene Symbol
dl
Assembly
GCA_000347755.4
Location
NW:2816001-2820448[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.9e-60 1e-56 191.0 0.0 1 169 44 213 44 213 0.99
2 3 3.2 5.6e+03 -3.4 0.0 61 93 540 574 534 594 0.74
3 3 2.9 5e+03 -3.3 0.2 103 134 930 961 919 968 0.53

Sequence Information

Coding Sequence
ATGGCATCGAGAcgagtaaaaaaatcaaagagtgGAGAAAAGAAGAATACGCtttcgcaaaaacaaaaacatcaacagAGTAAAGCGGAGAATTATGTAGAAACTTTGGAAAGTAATGGTGCaccttttgtaaaaattattgagCAACCAGCAAGTAGAATGGTGAGATTTCGTTACCAATGCGAAGGGCgctcagcagcagcagtacCGGGCATGAGCTCAACACCGCGAAATAAAACTTATCCTGAGATTGAAATCGTTGGCTATAAAGGAGCTTCTGTAGTTGTAGTATCTTGTGTATCCAAAGATGCACCGTATAGGCCACATCCATATAATTTGATTGGAAGAGAAGGTTGCAGACGTGGTGTATATACTGTTGCCAATAAAACGGGGACAACGCGCATAAAATTTTGTTCCTTAGGTGTACAATGTGTCAAGAGAACAGGTGTCCAAGCATCTTTAAAAATACGTGAAAATATACGCGTCGATCCCTTCAAAACTGGATTCGAACACGCTACTGAAGCGATATTTGTAGACATGACAGCGGTTCGTCTATGTTTCCAAGTATTCATTGAAGACTCTTCAGGACGTTTCACAATTCCTCTCAAACCTGTCGTTTCGGAACCAATTTATGATAGCAGGGCTGTAGCAGATCTTAAGATATATCAGATGTGCAGTTCGTCAACAGCGCTTGGTGACAAGCCAATTATCTTACTCTGCGACAAAATTATTAGGGAGAAAACAATGGTGAGATTTTATGAAGAGAAAGGTAGCGACGTTATCTGGCAATCGTATGGAGACTATCGACCATCTGATATACATAGGCAAACAGCAATTAAATTATACCCTCCGCAGTATCACAATCTAGATATAACAGAGCCTGTTCAAGTATACGTACAACTTGTAAACGTGGACGGTTTTGCTAGTGAACCTTGTCCCTTCAAATATATGCCTATTGATTCGGATGAAGTGTTATTAAAGCGTAAATGCAAGCGTATTGGTCTTGAAATTGGCACGGACTCAAAGAAAGAACATGCTTCTAGAGGGGATTCTTTTAGAAACATCGTGGAGAGTTGGTTGAAGCCTAATATAACAAGGTCGCTCTCAACTCACTCAAAGGAAGATGTATATACGGAAACATCGTCTAGCGATGAAACTTTGGAAAGTGCTTACAGCAGCATTCCCGAAGTAATCAGTGATGTAATTTCTGTCAGAATGGCGACTAGCGAAGACAGTAATGATTCCGTGGCTAATCAAAAACTTCAAACCCCTGCACATCAATTACCAACAAATTCTATACCgaatcatcaacaacaacaagcatcaCCTAGTAAATCAGATTATCAACATGAATACTTTCAGACGAAATCATCTAGCATGCAACAACCACAGAGTGCCTCCTCACCTTTATCGCTTGGACCAAAATTGTCTTTCATCGAAACACCTAAACCTGAATCTCTTCACCTGCAACAACATCACTTAAAGCAAACTCCACCACTCCATCATGAAAATACTCCACCACGATCACATAATTTACAACACCAACATCTCTCGATGAAATCAGCCCATAAACTGCCTCTCCAGATTAACTCAGCTCAACTGCAATCTTCAGATCATCTGCCGATAGAATCACATGGGCATGAGTtgagacaaaaacaaaatttgtcaaTCTCATCGCCTCATCAAACGGAGCAGTCGCCTCAGCCACTAACTGTCCGGTTTGACTCTCCTCAGCTGCAACTTTCAGGGCATTCAACGAAGGAATCACAAGCGTTCAAGCGTTCAAACAACAACTTATCAATGCGATCGCCTCATCAACCATCTCCGAATGAAATACAGGATTTGTTAGAACAGCTACCCCTCCGGTTTGACTCGCCTCAATTGCAATCACCGACGggatcacaacaacaaaacctcGCAGAGCCTTCTCCTCAACAACCTTTCAGAGAAAATCCAGAGTTGCGAAAGCAAAATCAAGCAATGGTGTTGTCTCAGATGCAGCAGCATCTCCCGAAACAATCACCTCAACATGGAAATTTTGCCACAGAATCACataagttacaacaacaacatctctCTATGAAATCATCTTATTCTCTTCCTCCCCGGATGGACTTAGCTCAACTGCAGCAAGAATATCTCTCAATAGAATCAGATGAACATGAGTtgaaacagaaacaaaatatgtcaatgtcatcaccTCATTCATTGGAGCAATCACCTCAGCCACTACCTCTCCGGCTTGACTCACCACAACTGCAACTTTCAGAACATCCTGCGATGGAGTCACATGAGCCCAAGCAACAACGAAATATTCCAATACGATCACCTCATCAAGAAGCTCcgaatgaaatacaaatacaggAATTGCTAGAACAGCTACCCCTCCGGTTTGACTCGCCTCAGTTGCAACTTTCAGAGCAAACACCAATGGAATCACATGGtttaaaacaacagcaaaattcCTCAATGGCATCGCCTCTTCAGCCTTCTAGAAAAACAGACGAGTTAAAACAACAAAGCTACCTAATTCCATCATCTCAACAACTACAAAAGCAGCAACCAATTCAGTGGCCACAACAACTCGAAAAGCATTCGCCTCTACATTCGAATTCTCCTATTAAATCGCATGATTTCGAGCAGCAACAGCTCTCAATTCAATCACATTTACAGAGAGATTCACCtcagttgcaacaacaatataatcaGAGGCAAACACAACATTATCCACAACAATATTATCCGAAGCCAATAGCTCATCCAATGGAATCAATTGAGTCAAAGCAACAAAGCCAAACGACACAATCATCTCAACAACAGCAATCTCTTCATATGAACACATTTCAGGTGAAACAAAATGTCTCAGgacaagcacaacaacaaaatcttccgATGAACTCacctcaacagcaacaacaaaacgtgCTGTTACCAAATTCGAATCTACAACCGCTGGGTGTTAAACCTCAGCAGCAGTCTCTGCACCTGCAGCAAATGCAATCTCTTATGCTTATGTCGACTCAGTTGCagcagttgcaacaacaacagccccATTCCAATCAACAACTGTTGCAACCGAATCACAATACTATTGCCCCTTTACAGGACGGGATGGTTGCGACTGTTCTTGCCAACGCATTTGCAtctttgttggaaaattatcaGTCCAAATTTCAACAACTCATCGCAGCTACAGCAAATACCATGCTGCAGAGTGGACAGTGGAATATTCCGCCAACAAATAATGCCGTAAATATGCTTGCGCAGATGCAGactcagcaacagcaacagcaattgaTGGtgcaacaacggcaacaatcACCAGCACATCAACAACTGcaagaaatttcacaaaatatagaacaacaacaagctcAGCAATCGCCAGCACATCTACAACATTTAGAACAACAACCACATCAAGAGTTAGCTCGAGCAAAAATTCAGCAGCGGCCCAGCAACAATACTCATTTCGAAAAACCAACAAATCGTGAGCAATCGAATGATCATGCTTTACAtaacttattaaatttagaGGAAAATGCCGGTAGCAATTCGATCCCATCCAGCCCTCTCTGGTCCTTCGATACTTga
Protein Sequence
MASRRVKKSKSGEKKNTLSQKQKHQQSKAENYVETLESNGAPFVKIIEQPASRMVRFRYQCEGRSAAAVPGMSSTPRNKTYPEIEIVGYKGASVVVVSCVSKDAPYRPHPYNLIGREGCRRGVYTVANKTGTTRIKFCSLGVQCVKRTGVQASLKIRENIRVDPFKTGFEHATEAIFVDMTAVRLCFQVFIEDSSGRFTIPLKPVVSEPIYDSRAVADLKIYQMCSSSTALGDKPIILLCDKIIREKTMVRFYEEKGSDVIWQSYGDYRPSDIHRQTAIKLYPPQYHNLDITEPVQVYVQLVNVDGFASEPCPFKYMPIDSDEVLLKRKCKRIGLEIGTDSKKEHASRGDSFRNIVESWLKPNITRSLSTHSKEDVYTETSSSDETLESAYSSIPEVISDVISVRMATSEDSNDSVANQKLQTPAHQLPTNSIPNHQQQQASPSKSDYQHEYFQTKSSSMQQPQSASSPLSLGPKLSFIETPKPESLHLQQHHLKQTPPLHHENTPPRSHNLQHQHLSMKSAHKLPLQINSAQLQSSDHLPIESHGHELRQKQNLSISSPHQTEQSPQPLTVRFDSPQLQLSGHSTKESQAFKRSNNNLSMRSPHQPSPNEIQDLLEQLPLRFDSPQLQSPTGSQQQNLAEPSPQQPFRENPELRKQNQAMVLSQMQQHLPKQSPQHGNFATESHKLQQQHLSMKSSYSLPPRMDLAQLQQEYLSIESDEHELKQKQNMSMSSPHSLEQSPQPLPLRLDSPQLQLSEHPAMESHEPKQQRNIPIRSPHQEAPNEIQIQELLEQLPLRFDSPQLQLSEQTPMESHGLKQQQNSSMASPLQPSRKTDELKQQSYLIPSSQQLQKQQPIQWPQQLEKHSPLHSNSPIKSHDFEQQQLSIQSHLQRDSPQLQQQYNQRQTQHYPQQYYPKPIAHPMESIESKQQSQTTQSSQQQQSLHMNTFQVKQNVSGQAQQQNLPMNSPQQQQQNVLLPNSNLQPLGVKPQQQSLHLQQMQSLMLMSTQLQQLQQQQPHSNQQLLQPNHNTIAPLQDGMVATVLANAFASLLENYQSKFQQLIAATANTMLQSGQWNIPPTNNAVNMLAQMQTQQQQQQLMVQQRQQSPAHQQLQEISQNIEQQQAQQSPAHLQHLEQQPHQELARAKIQQRPSNNTHFEKPTNREQSNDHALHNLLNLEENAGSNSIPSSPLWSFDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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