Ccal003925.1
Basic Information
- Insect
- Ceratina calcarata
- Gene Symbol
- Sub1
- Assembly
- GCA_026724355.1
- Location
- JAKKRE010000009.1:9322819-9323374[+]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.37 1e+04 -3.3 0.0 29 36 18 25 16 26 0.74 2 2 4.3e-26 1.2e-21 76.5 0.1 1 52 69 121 69 121 0.96
Sequence Information
- Coding Sequence
- ATGCCAAAATCAAAGGAATATGTCGATAGTACCGATGATAGTAGCAATGAAGAGGAGGAAGTGAAACCATCAAAACAAAAGAAGAGAGAACCTGAAGAGAAGGAAGAGAAGATGGCAAAAAAGAAGAAGAGAGAACCTGAGGAGAAGGAAGAGAAAACAGCAAAAAAGGCCAAAAAACAGTCGGGCGACGATGAAGATGATAGTTGGGATTTGGGAAATAATCGTAAAGTTATGGTCCGGGACTTTAAAGGGAAATTGCTGGTCGATATTAGAGAAATGTATTTTGATAATGCAGGAAACACAAAACCTGGAAAGAAAGGTATTGCTTTAACTATGCCTCAATGGCGAAAATTACTGGATATTATAGAAGACGTTGACGAAGCTGTAAAGTCTAAAGCTTAA
- Protein Sequence
- MPKSKEYVDSTDDSSNEEEEVKPSKQKKREPEEKEEKMAKKKKREPEEKEEKTAKKAKKQSGDDEDDSWDLGNNRKVMVRDFKGKLLVDIREMYFDNAGNTKPGKKGIALTMPQWRKLLDIIEDVDEAVKSKA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -